CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 6
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26406	Sorghum	cytosol, peroxisome, plastid	86.45	86.97
Zm00001d025528_P002	Maize	mitochondrion	85.24	82.27
TraesCS2A01G315500.1	Wheat	cytosol	40.36	73.63
EES10886	Sorghum	cytosol	69.88	70.95
Os04t0447500-01	Rice	plastid	68.07	67.87
TraesCS2B01G333800.1	Wheat	plastid	71.69	64.67
HORVU2Hr1G078570.8	Barley	plastid	71.08	63.61
KXG26405	Sorghum	plastid	68.37	63.06
KXG26407	Sorghum	plastid	59.04	59.21
EES10887	Sorghum	plastid	56.93	57.62
VIT_01s0011g06440.t01	Wine grape	cytosol, peroxisome, plastid	50.3	52.52
VIT_01s0011g06460.t01	Wine grape	cytosol, extracellular, peroxisome	48.19	50.96
PGSC0003DMT400058309	Potato	cytosol	49.7	50.61
VIT_01s0011g06450.t01	Wine grape	cytosol, peroxisome, plastid	48.8	50.47
KRH12716	Soybean	plastid	46.39	48.89
EES11810	Sorghum	cytosol	45.48	48.4
AT1G59960.1	Thale cress	cytosol, mitochondrion, peroxisome, plastid	46.99	47.85
EES10424	Sorghum	cytosol, plastid	45.18	47.77
CDX79850	Canola	cytosol	46.69	47.69
KRG89550	Soybean	cytosol	46.08	47.66
KRH01577	Soybean	endoplasmic reticulum, nucleus	45.18	47.62
VIT_01s0011g06510.t01	Wine grape	cytosol	45.18	47.47
VIT_01s0011g06500.t01	Wine grape	extracellular	44.88	47.15
AT1G59950.1	Thale cress	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.18	46.88
KRH14079	Soybean	cytosol	42.47	46.84
Solyc04g008440.1.1	Tomato	plastid	44.58	46.69
EER95200	Sorghum	plastid	48.8	46.55
CDY30914	Canola	cytosol	45.48	46.18
KRH74034	Soybean	endoplasmic reticulum, mitochondrion, nucleus	43.67	46.03
VIT_01s0011g06430.t01	Wine grape	cytosol	46.69	45.19
VIT_01s0011g06490.t01	Wine grape	cytosol	23.49	44.57
EER94392	Sorghum	plastid	45.18	43.35
EER91802	Sorghum	cytosol, plastid	46.39	43.26
EER94390	Sorghum	cytosol	45.78	43.06
CDY44475	Canola	cytosol, nucleus, peroxisome	33.43	43.02
Bra027828.1-P	Field mustard	cytosol	46.39	41.96
EES01754	Sorghum	plastid	38.25	41.78
KRH71973	Soybean	cytoskeleton, cytosol, peroxisome	40.36	41.23
EES01752	Sorghum	cytosol	37.95	40.51
EES01753	Sorghum	cytosol, mitochondrion, plastid	37.35	40.0
KXG22143	Sorghum	extracellular	37.05	39.55
EES19639	Sorghum	cytosol, peroxisome, plastid	35.54	37.82
EES06204	Sorghum	cytosol	35.54	37.11
KXG22204	Sorghum	cytosol	34.94	36.36
VIT_01s0011g06470.t01	Wine grape	cytosol	47.89	35.41
KXG22145	Sorghum	plastid	38.25	34.32
EER94391	Sorghum	cytosol, peroxisome, plastid	10.24	30.63

Protein Annotations

Gene3D:3.20.20.100	MapMan:50.1.1	EntrezGene:8065841	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	UniProt:C5Y9A6
EnsemblPlants:EES10888	ProteinID:EES10888	ProteinID:EES10888.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf
PFAM:PF00248	PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062	ScanProsite:PS00063	ScanProsite:PS00798
PANTHER:PTHR11732	PANTHER:PTHR11732:SF228	EnsemblPlantsGene:SORBI_3006G096200	SUPFAM:SSF51430	UniParc:UPI0001A86DAD	RefSeq:XP_002446560.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:46618733..46621187

Molecular Weight (calculated)

36640.2 Da

IEP (calculated)

6.886

GRAVY (calculated)

-0.130

Length

332 amino acids

Sequence
(BLAST)

001: MASPTRRVVG TSNSEIPTFP VSSAGRPVPA VGLGTASFPF VEEDVRASVL AALEFGYRHL DTASLYGTEG AVGDGVAEAA RRGIVASREE VFVTTKIWCS
101: QSHPELVLPS LKESLQNLQM DYVDLYLVHF PVAAKPGNPQ FPIKREDIMP IDLSGVWRAM EECHRLGLAR MIGVSNFTTK KLQELLAIAE IPPAVNQVEM
201: NPIWQQKRLT EFCKDKGIHL TAYSPLGGQI SAFEANPVLQ SEVLQEVAKA RGKSVAQISL RWIYEQGASM VVKSVKRDRL KANMEIFDWE LTNKDRRKIS
301: QIPQHKTVTV SGVLSPHGVS NMDFAELDIV ET

Best Arabidopsis Sequence Match ( AT1G59960.1 )
(BLAST)

001: MSLTTVPTLA IRSGPSGHHS MPVLGFGTAA SPLPEPTMLK ETVIEAIKLG YRHFDTSPRY QTEEPIGEAL AEAVSLGLVR SRSEFFVTTK LWCADAHGGL
101: VVPAIKRSLK NLKLDYLDLY IIHWPVSSKP GKYKFPIDED DFMPMDFEVV WSEMEECQRL GLAKCIGVSN FSCKKLQHIL SIATIPPSVN QVEMSPIWQQ
201: RKLRELCRSN DIVVTAYSVL GSRGAFWGTP KIMESDVLKE IAEAKEKTVA QVSMRWAYEQ GVSMVVKSFT KERLEENLKI FDWSLTEDET QRISTEIPQF
301: RNVHGEVYTS KKGPIKSVAE MWDGEI

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SXC0]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.