CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025533_P001	Maize	cytosol	83.69	83.69
Zm00001d003524_P001	Maize	plastid	81.87	82.37
TraesCS2A01G315600.1	Wheat	cytosol	75.23	76.15
TraesCS2D01G313700.1	Wheat	cytosol	74.62	75.77
TraesCS2B01G333900.1	Wheat	cytosol	74.32	75.23
TraesCS2A01G315700.1	Wheat	cytosol	73.72	74.62
EES10887	Sorghum	plastid	73.72	74.39
Os04t0447600-01	Rice	cytosol	72.21	73.99
TraesCS2B01G547800.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	68.88	70.81
Os04t0447700-01	Rice	mitochondrion	73.72	68.35
KXG26406	Sorghum	cytosol, peroxisome, plastid	60.12	60.3
EES10886	Sorghum	cytosol	58.61	59.33
EES10888	Sorghum	mitochondrion, plastid	59.21	59.04
VIT_01s0011g06460.t01	Wine grape	cytosol, extracellular, peroxisome	53.78	56.69
VIT_01s0011g06450.t01	Wine grape	cytosol, peroxisome, plastid	54.68	56.39
KXG26405	Sorghum	plastid	60.12	55.28
PGSC0003DMT400058309	Potato	cytosol	54.38	55.21
KRH12716	Soybean	plastid	50.76	53.33
KRG89550	Soybean	cytosol	51.36	52.96
VIT_01s0011g06440.t01	Wine grape	cytosol, peroxisome, plastid	50.76	52.83
VIT_01s0011g06510.t01	Wine grape	cytosol	50.15	52.53
KRH14079	Soybean	cytosol	47.73	52.49
VIT_01s0011g06500.t01	Wine grape	extracellular	49.85	52.22
KRH74034	Soybean	endoplasmic reticulum, mitochondrion, nucleus	48.94	51.43
KRH01577	Soybean	endoplasmic reticulum, nucleus	48.64	51.11
CDX79850	Canola	cytosol	50.15	51.08
AT1G59960.1	Thale cress	cytosol, mitochondrion, peroxisome, plastid	50.15	50.92
EES11810	Sorghum	cytosol	47.43	50.32
AT1G59950.1	Thale cress	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.64	50.31
EER95200	Sorghum	plastid	52.87	50.29
CDY30914	Canola	cytosol	49.24	49.85
EES10424	Sorghum	cytosol, plastid	47.13	49.68
VIT_01s0011g06430.t01	Wine grape	cytosol	50.45	48.69
Solyc04g008440.1.1	Tomato	plastid	45.62	47.63
EER91802	Sorghum	cytosol, plastid	50.76	47.19
EER94390	Sorghum	cytosol	49.55	46.46
VIT_01s0011g06490.t01	Wine grape	cytosol	24.47	46.29
CDY44475	Canola	cytosol, nucleus, peroxisome	35.95	46.12
EER94392	Sorghum	plastid	47.43	45.38
Bra027828.1-P	Field mustard	cytosol	49.85	44.96
EES01754	Sorghum	plastid	40.79	44.41
EES01753	Sorghum	cytosol, mitochondrion, plastid	41.39	44.19
KRH71973	Soybean	cytoskeleton, cytosol, peroxisome	42.9	43.69
EES19639	Sorghum	cytosol, peroxisome, plastid	39.27	41.67
EES01752	Sorghum	cytosol	38.97	41.48
KXG22143	Sorghum	extracellular	38.37	40.84
KXG22204	Sorghum	cytosol	37.16	38.56
EER94391	Sorghum	cytosol, peroxisome, plastid	12.69	37.84
KXG22145	Sorghum	plastid	41.99	37.57
VIT_01s0011g06470.t01	Wine grape	cytosol	50.45	37.19
EES06204	Sorghum	cytosol	35.35	36.79

Protein Annotations

Gene3D:3.20.20.100	MapMan:50.1.1	UniProt:A0A1B6PL71	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812
EnsemblPlants:KXG26407	ProteinID:KXG26407	ProteinID:KXG26407.1	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248
PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062	ScanProsite:PS00063	ScanProsite:PS00798	PANTHER:PTHR11732
PANTHER:PTHR11732:SF372	EnsemblPlantsGene:SORBI_3006G096400	SUPFAM:SSF51430	UniParc:UPI0001C8053E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:46653644..46655784

Molecular Weight (calculated)

36775.0 Da

IEP (calculated)

5.466

GRAVY (calculated)

-0.221

Length

331 amino acids

Sequence
(BLAST)

001: MSMAASTAAA VAVPEVSLRS GDARPMPMVG MGTAQFPVVN EATRNAVLAA IEVGFRHFDT AFLYGTEEPL GEAAAEAIRR GLVRSREDLF VTSKLWCTQN
101: HPHLVLPSLR ETLKNLQMEY VDLYLIHWPV CIKPGPPKFP NKKEDAVPVD FEGVWRAMEE CQRLGLARAI GVSNFTTKHL DRVLAVATIP PAVNQVELNP
201: AWQQRTLRAY CADRGIHVAA YSPLGGQNWD GQGNAVLDSE VLAEIAKARG KTVAQVALRW IHEQGVTSIA KSYNKERLKQ NLEIFDWELT EEDRLKISQI
301: PQRKVVQATS LFSEEGEFTS VDPEEMNIAE E

Best Arabidopsis Sequence Match ( AT1G59960.1 )
(BLAST)

001: MSLTTVPTLA IRSGPSGHHS MPVLGFGTAA SPLPEPTMLK ETVIEAIKLG YRHFDTSPRY QTEEPIGEAL AEAVSLGLVR SRSEFFVTTK LWCADAHGGL
101: VVPAIKRSLK NLKLDYLDLY IIHWPVSSKP GKYKFPIDED DFMPMDFEVV WSEMEECQRL GLAKCIGVSN FSCKKLQHIL SIATIPPSVN QVEMSPIWQQ
201: RKLRELCRSN DIVVTAYSVL GSRGAFWGTP KIMESDVLKE IAEAKEKTVA QVSMRWAYEQ GVSMVVKSFT KERLEENLKI FDWSLTEDET QRISTEIPQF
301: RNVHGEVYTS KKGPIKSVAE MWDGEI

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SXC0]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.