Factsheet for VIT_01s0011g06460.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, cytosol

Predictor Summary:

plastid 3
peroxisome 1
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0011g06450.t01	Wine grape	cytosol, peroxisome, plastid	91.4	89.41
VIT_01s0011g06440.t01	Wine grape	cytosol, peroxisome, plastid	67.83	66.98
VIT_01s0011g06490.t01	Wine grape	cytosol	37.26	66.86
VIT_01s0011g06430.t01	Wine grape	cytosol	67.2	61.52
VIT_01s0011g06510.t01	Wine grape	cytosol	60.83	60.44
TraesCS2A01G315500.1	Wheat	cytosol	33.76	58.24
TraesCS4D01G232200.1	Wheat	cytosol	55.41	58.19
VIT_01s0011g06500.t01	Wine grape	extracellular	57.96	57.59
Os03t0237100-01	Rice	plasma membrane	57.96	57.23
Zm00001d028360_P001	Maize	extracellular	56.05	56.05
HORVU4Hr1G064720.1	Barley	cytosol	56.05	56.05
TraesCS4A01G074800.1	Wheat	golgi	56.05	56.05
GSMUA_Achr9P15760_001	Banana	cytosol, nucleus, peroxisome, plastid	57.64	56.04
AT1G59950.1	Thale cress	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.69	55.62
VIT_05s0077g02190.t01	Wine grape	cytosol	56.05	55.35
VIT_18s0001g09570.t01	Wine grape	cytosol, nucleus, peroxisome	56.37	54.97
TraesCS2D01G313700.1	Wheat	cytosol	57.01	54.91
VIT_05s0077g02180.t01	Wine grape	cytosol, peroxisome, plastid	34.39	54.82
TraesCS2B01G333900.1	Wheat	cytosol	56.37	54.13
CDY30914	Canola	cytosol	56.37	54.13
TraesCS2A01G315600.1	Wheat	cytosol	56.37	54.13
TraesCS7B01G268400.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	29.62	54.07
EES10887	Sorghum	plastid	56.37	53.96
Os10t0113900-02	Rice	cytosol	56.69	53.94
Os04t0447600-01	Rice	cytosol	55.41	53.87
KXG26407	Sorghum	plastid	56.69	53.78
CDX79850	Canola	cytosol	55.41	53.54
VIT_01s0011g06470.t01	Wine grape	cytosol	76.43	53.45
Os10t0113000-01	Rice	plasma membrane	54.46	53.27
AT1G59960.1	Thale cress	cytosol, mitochondrion, peroxisome, plastid	55.1	53.07
TraesCS2A01G315700.1	Wheat	cytosol	55.1	52.91
Zm00001d003524_P001	Maize	plastid	55.41	52.89
Zm00001d025533_P001	Maize	cytosol	55.73	52.87
GSMUA_Achr3P07660_001	Banana	plastid	54.78	52.76
VIT_05s0077g02150.t01	Wine grape	cytosol	50.96	52.63
Os10t0114300-01	Rice	cytosol	56.69	52.05
CDY44475	Canola	cytosol, nucleus, peroxisome	42.36	51.55
TraesCS2B01G547800.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	52.55	51.24
EER95200	Sorghum	plastid	56.69	51.15
HORVU2Hr1G000140.3	Barley	cytosol, peroxisome	28.34	50.57
EES11810	Sorghum	cytosol	49.68	50.0
Zm00001d005932_P001	Maize	cytosol	54.46	49.85
KXG26406	Sorghum	cytosol, peroxisome, plastid	52.23	49.7
Os10t0113100-01	Rice	plastid	50.96	49.69
GSMUA_Achr9P15770_001	Banana	cytosol, golgi, peroxisome, plastid	57.96	49.19
EES10886	Sorghum	cytosol	50.96	48.93
Os04t0447500-01	Rice	plastid	51.27	48.35
Zm00001d025528_P002	Maize	mitochondrion	52.87	48.26
Zm00001d025057_P001	Maize	plastid	48.09	48.24
EES10888	Sorghum	mitochondrion, plastid	50.96	48.19
Os04t0447700-01	Rice	mitochondrion	54.78	48.18
EES10424	Sorghum	cytosol, plastid	48.09	48.09
Bra027828.1-P	Field mustard	cytosol	56.05	47.96
GSMUA_Achr3P07670_001	Banana	mitochondrion, plastid	52.55	47.14
TraesCS2D01G000200.1	Wheat	cytosol, peroxisome, plastid	47.13	46.69
TraesCS2B01G023500.1	Wheat	cytosol	48.09	46.32
EER94392	Sorghum	plastid	50.96	46.24
VIT_08s0007g01040.t01	Wine grape	cytosol	42.36	45.86
Zm00001d003525_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	52.55	45.83
KXG26405	Sorghum	plastid	52.55	45.83
EER91802	Sorghum	cytosol, plastid	51.91	45.79
TraesCS7A01G358800.1	Wheat	cytosol	46.82	45.51
TraesCS2B01G333800.1	Wheat	plastid	53.18	45.38
TraesCS7D01G363700.1	Wheat	cytosol	47.45	45.15
EER94391	Sorghum	cytosol, peroxisome, plastid	15.92	45.05
HORVU2Hr1G078570.8	Barley	plastid	53.18	45.01
TraesCS2A01G000600.1	Wheat	cytosol	47.13	44.98
Zm00001d000060_P001	Maize	extracellular	51.27	44.97
EER94390	Sorghum	cytosol	50.32	44.76
VIT_16s0013g02110.t01	Wine grape	cytosol	39.17	44.24
Os04t0167800-01	Rice	plasma membrane	47.45	44.21
VIT_08s0007g01030.t01	Wine grape	cytosol	42.99	43.41
VIT_08s0007g01050.t01	Wine grape	cytosol	40.76	40.63
VIT_08s0058g00650.t01	Wine grape	cytosol	40.76	39.75
VIT_08s0007g01020.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	45.86	39.13
VIT_03s0038g00800.t01	Wine grape	cytosol	34.08	34.63
VIT_01s0010g01730.t01	Wine grape	cytosol	27.71	31.64

Protein Annotations

EntrezGene:100242453	wikigene:100242453	Gene3D:3.20.20.100	MapMan:50.1.1	EMBL:AM457828	InterPro:Aldo/ket_reductase_CS
InterPro:Aldo/keto_reductase	ProteinID:CAN83197	ProteinID:CAN83197.1	ProteinID:CCB50747	ProteinID:CCB50747.1	UniProt:F6HF98
EMBL:FN595752	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:IPR036812	EntrezGene:LOC100242453	wikigene:LOC100242453	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf
PFAM:PF00248	PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062	ScanProsite:PS00063	ScanProsite:PS00798
PANTHER:PTHR11732	PANTHER:PTHR11732:SF380	SUPFAM:SSF51430	TIGR:TC57028	UniParc:UPI00015C8E56	ArrayExpress:VIT_01s0011g06460
EnsemblPlantsGene:VIT_01s0011g06460	EnsemblPlants:VIT_01s0011g06460.t01	unigene:Vvi.9261	RefSeq:XP_002285219	RefSeq:XP_002285219.1	SEG:seg

Description

No Description!

Coordinates

chr1:-:6263899..6272514

Molecular Weight (calculated)

35598.2 Da

IEP (calculated)

5.724

GRAVY (calculated)

-0.203

Length

314 amino acids

Sequence
(BLAST)

001: MASIGKAIPL VGMGTAAFPF APSETMKDSI LHAIKVGYRH FDTASAYNSE KPLGEVIKKA LELGLIKSRE ELFITSKLWG NDAHPHCVLP ALQQTLKNLE
101: LEYLDLYLIH WPLSMKPGNF EFPLKKEDLL PMDYASVWKD LEDCQKLGLT KAIGVSNFSS KKLDDLLRIA TIPPAVNQVE MNPLWQQKKL REFCAEKGIH
201: ITAYSPLGAR GTPWGGDRVM ECQVLKEIAQ ARGKTIAQVC LRWIYEQGVS VIVKSFNKER MKENLEIFDW ELSVEDIQKI DQIQQFKGVP GLEFISDEGP
301: YKSVVELWDE EIQF

Best Arabidopsis Sequence Match ( AT1G59960.1 )
(BLAST)

001: MSLTTVPTLA IRSGPSGHHS MPVLGFGTAA SPLPEPTMLK ETVIEAIKLG YRHFDTSPRY QTEEPIGEAL AEAVSLGLVR SRSEFFVTTK LWCADAHGGL
101: VVPAIKRSLK NLKLDYLDLY IIHWPVSSKP GKYKFPIDED DFMPMDFEVV WSEMEECQRL GLAKCIGVSN FSCKKLQHIL SIATIPPSVN QVEMSPIWQQ
201: RKLRELCRSN DIVVTAYSVL GSRGAFWGTP KIMESDVLKE IAEAKEKTVA QVSMRWAYEQ GVSMVVKSFT KERLEENLKI FDWSLTEDET QRISTEIPQF
301: RNVHGEVYTS KKGPIKSVAE MWDGEI

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SXC0]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.