Factsheet for TraesCS4A01G074800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G232200.1	Wheat	cytosol	93.31	97.99
HORVU4Hr1G064720.1	Barley	cytosol	96.82	96.82
Os03t0237100-01	Rice	plasma membrane	84.71	83.65
Zm00001d028360_P001	Maize	extracellular	82.48	82.48
EER95200	Sorghum	plastid	81.85	73.85
GSMUA_Achr11P...	Banana	cytosol	65.61	64.38
VIT_01s0011g06460.t01	Wine grape	cytosol, extracellular, peroxisome	56.05	56.05
VIT_01s0011g06450.t01	Wine grape	cytosol, peroxisome, plastid	56.69	55.45
CDX79850	Canola	cytosol	56.37	54.46
VIT_01s0011g06440.t01	Wine grape	cytosol, peroxisome, plastid	54.78	54.09
AT1G59950.1	Thale cress	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.78	53.75
CDY30914	Canola	cytosol	55.41	53.21
TraesCS2A01G315600.1	Wheat	cytosol	55.41	53.21
CDY44475	Canola	cytosol, nucleus, peroxisome	43.63	53.1
TraesCS2A01G315700.1	Wheat	cytosol	55.1	52.91
AT1G59960.1	Thale cress	cytosol, mitochondrion, peroxisome, plastid	54.46	52.45
KRH12716	Soybean	plastid	52.23	52.06
VIT_01s0011g06510.t01	Wine grape	cytosol	51.91	51.58
VIT_01s0011g06430.t01	Wine grape	cytosol	56.05	51.31
KRH74034	Soybean	endoplasmic reticulum, mitochondrion, nucleus	51.27	51.11
KRH01577	Soybean	endoplasmic reticulum, nucleus	50.96	50.79
KRG89550	Soybean	cytosol	51.27	50.16
VIT_01s0011g06500.t01	Wine grape	extracellular	50.32	50.0
TraesCS2A01G315500.1	Wheat	cytosol	28.98	50.0
VIT_01s0011g06490.t01	Wine grape	cytosol	27.71	49.71
TraesCS7A01G358800.1	Wheat	cytosol	50.96	49.54
Solyc04g008440.1.1	Tomato	plastid	50.0	49.53
KRH14079	Soybean	cytosol	47.45	49.5
TraesCS2A01G000600.1	Wheat	cytosol	50.96	48.63
Bra027828.1-P	Field mustard	cytosol	56.05	47.96
TraesCS1A01G282600.1	Wheat	unclear	43.63	44.34
TraesCS3A01G363500.1	Wheat	plastid	41.4	42.62
TraesCS3A01G363400.1	Wheat	cytosol, peroxisome, plastid	42.04	42.44
KRH71973	Soybean	cytoskeleton, cytosol, peroxisome	43.63	42.15
TraesCS1A01G282200.1	Wheat	cytosol	26.43	41.92
TraesCS3A01G038400.1	Wheat	cytosol, mitochondrion, plastid	41.08	41.61
VIT_01s0011g06470.t01	Wine grape	cytosol	59.24	41.43
TraesCS1A01G281900.1	Wheat	cytosol	27.07	41.26
TraesCS1A01G021900.1	Wheat	cytosol	20.38	41.03
TraesCS1A01G282000.1	Wheat	cytosol	40.13	40.26
TraesCS7A01G241400.1	Wheat	cytosol	41.4	40.25
TraesCS1A01G282400.1	Wheat	cytosol	37.58	38.94
TraesCS1A01G298200.1	Wheat	cytosol	29.94	34.18
TraesCS1A01G282300.2	Wheat	mitochondrion	33.76	32.72
TraesCS6A01G079000.1	Wheat	golgi	32.48	32.69
TraesCS3A01G045300.1	Wheat	cytosol	32.8	32.29
GSMUA_Achr8P16620_001	Banana	mitochondrion	57.96	23.82
GSMUA_Achr8P16660_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	58.28	16.62

Protein Annotations

MapMan:25.4.3.1.3	Gene3D:3.20.20.100	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006950	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009605
GO:GO:0009987	GO:GO:0009991	GO:GO:0016491	GO:GO:0019290	GO:GO:0019748	GO:GO:0033707
GO:GO:0034224	GO:GO:0055114	GO:GO:1990641	InterPro:IPR036812	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf
PFAM:PF00248	PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00063	ScanProsite:PS00798	PANTHER:PTHR11732
PANTHER:PTHR11732:SF379	SUPFAM:SSF51430	EnsemblPlantsGene:TraesCS4A01G074800	EnsemblPlants:TraesCS4A01G074800.1	TIGR:cd06660	SEG:seg

Description

No Description!

Coordinates

chr4A:-:74151115..74152908

Molecular Weight (calculated)

35200.2 Da

IEP (calculated)

6.932

GRAVY (calculated)

-0.318

Length

314 amino acids

Sequence
(BLAST)

001: MGAGDKTAAG MPRIGMGTAV QGPKPDPIRR AVLRAIEVGY RHFDTAAHYE TEAPIGEAAA EAVRSGAVAS RDDLFITSKL WCSDAHRDRV VPALRQTLRN
101: LQMEYVDLYL VHWPVSMKPG RFKAPFTAED FVPFDMRAVW EAMEECHRLG LAKAIGVANF SCKKLETLLS FATIPPTVNQ VEVNPVWQQR KLREFCRGKG
201: IQLCAYSPLG AKGTHWGSDA VMDAGVLQEI AASRGKSVAQ VCLRWVYEQG DCLIVKSFDE ARMRENLDVD GWELTEEEHR RIAEIPQRKI NLGKRYVSEH
301: GPYKSLEELW DGEI

Best Arabidopsis Sequence Match ( AT1G59960.1 )
(BLAST)

001: MSLTTVPTLA IRSGPSGHHS MPVLGFGTAA SPLPEPTMLK ETVIEAIKLG YRHFDTSPRY QTEEPIGEAL AEAVSLGLVR SRSEFFVTTK LWCADAHGGL
101: VVPAIKRSLK NLKLDYLDLY IIHWPVSSKP GKYKFPIDED DFMPMDFEVV WSEMEECQRL GLAKCIGVSN FSCKKLQHIL SIATIPPSVN QVEMSPIWQQ
201: RKLRELCRSN DIVVTAYSVL GSRGAFWGTP KIMESDVLKE IAEAKEKTVA QVSMRWAYEQ GVSMVVKSFT KERLEENLKI FDWSLTEDET QRISTEIPQF
301: RNVHGEVYTS KKGPIKSVAE MWDGEI

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SXC0]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.