Factsheet for TraesCS6A01G079000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 2
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G072600.1	Wheat	cytosol	99.04	99.04
TraesCS6B01G106100.1	Wheat	cytosol	93.59	93.59
EES06204	Sorghum	cytosol	89.74	88.05
TraesCS3A01G045300.1	Wheat	cytosol	89.74	87.77
Zm00001d053932_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	86.86	85.22
Solyc01g110450.2.1	Tomato	extracellular	80.13	80.91
HORVU6Hr1G013800.2	Barley	plastid	95.19	80.71
AT2G21250.1	Thale cress	cytosol	79.81	80.58
Bra031177.1-P	Field mustard	cytosol	79.81	80.58
CDY13825	Canola	cytosol	79.81	80.58
VIT_03s0038g00800.t01	Wine grape	cytosol	79.81	80.58
CDX82012	Canola	cytosol	79.49	80.26
PGSC0003DMT400004180	Potato	cytosol, peroxisome, plastid	78.85	79.61
AT2G21260.1	Thale cress	cytosol	78.53	79.29
KRH24361	Soybean	endoplasmic reticulum, nucleus	78.21	78.96
Os02t0123500-01	Rice	plasma membrane	90.38	75.2
GSMUA_Achr9P24380_001	Banana	endoplasmic reticulum	81.41	75.15
TraesCS3A01G363400.1	Wheat	cytosol, peroxisome, plastid	41.99	42.12
TraesCS1A01G282400.1	Wheat	cytosol	40.71	41.91
TraesCS1A01G281900.1	Wheat	cytosol	27.24	41.26
TraesCS3A01G038400.1	Wheat	cytosol, mitochondrion, plastid	40.38	40.65
TraesCS1A01G282000.1	Wheat	cytosol	39.1	38.98
TraesCS3A01G363500.1	Wheat	plastid	37.82	38.69
TraesCS1A01G282600.1	Wheat	unclear	37.82	38.19
TraesCS1A01G021900.1	Wheat	cytosol	18.27	36.54
TraesCS7A01G241400.1	Wheat	cytosol	37.82	36.53
TraesCS1A01G298200.1	Wheat	cytosol	30.45	34.55
TraesCS1A01G282300.2	Wheat	mitochondrion	35.58	34.26
TraesCS2A01G315600.1	Wheat	cytosol	34.94	33.33
TraesCS2A01G315700.1	Wheat	cytosol	34.94	33.33
TraesCS1A01G282200.1	Wheat	cytosol	21.15	33.33
TraesCS2A01G315500.1	Wheat	cytosol	19.23	32.97
TraesCS4A01G074800.1	Wheat	golgi	32.69	32.48
TraesCS2A01G000600.1	Wheat	cytosol	33.33	31.61
TraesCS7A01G358800.1	Wheat	cytosol	32.05	30.96

Protein Annotations

Gene3D:3.20.20.100	MapMan:3.5.1	MapMan:3.6.3	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062
ScanProsite:PS00063	ScanProsite:PS00798	PANTHER:PTHR11732	PANTHER:PTHR11732:SF209	SUPFAM:SSF51430	EnsemblPlantsGene:TraesCS6A01G079000
EnsemblPlants:TraesCS6A01G079000.1	TIGR:cd06660	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6A:-:48563765..48567172

Molecular Weight (calculated)

34605.2 Da

IEP (calculated)

6.436

GRAVY (calculated)

-0.174

Length

312 amino acids

Sequence
(BLAST)

001: MAATATKLSS GHEMPAVGLG VWRMDSAAVR GLIHSALRAG YRHFDCAADY KNEAEVGDAL AEAFETGLVK REDLFITTKL WNSDHGHVVE ACKDSLKKLR
101: LDYLDLYLIH FPVATKHTGV GTTGSALGDD GVLDIDTTIT LETTWHAMED LVSMGLVRSI GISNYDIFLT RDCLAYAKIK PAVNQIETHP YFQRDSLVKF
201: CQKHGISVTA HTPLGGSTAN TEWFGSVSCL DDPVIKSLAE KYGKTPAQLV LRWGLQRNTV VIPKTSKVER LEENFAVFDF DISVEDMEKI KALDRNYRTN
301: QPAKFWGSNL YA

Best Arabidopsis Sequence Match ( AT2G21250.1 )
(BLAST)

001: MEITLNSGFK MPIVGLGVWR MEKEGIRDLI LNAIKIGYRH LDCAADYRNE TEVGDALTEA FKTGLVKRED LFITTKLWNS DHGHVIEACK DSLKKLQLDY
101: LDLFLVHFPV ATKHTGVGTT DSALGDDGVL DIDTTISLET TWHDMEKLVS MGLVRSIGIS NYDVFLTRDC LAYSKIKPAV NQIETHPYFQ RDSLVKFCQK
201: HGICVTAHTP LGGATANAEW FGTVSCLDDP VLKDVAEKYK KTVAQVVLRW GIQRKTVVIP KTSKPARLEE NFQVFDFELS KEDMEVIKSM ERKYRTNQPA
301: KFWNIDLYA

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SJV2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.