CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053932_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	90.25	90.25
TraesCS6D01G072600.1	Wheat	cytosol	88.36	90.06
TraesCS6A01G079000.1	Wheat	golgi	88.05	89.74
TraesCS6B01G106100.1	Wheat	cytosol	85.85	87.5
CDX82012	Canola	cytosol	79.87	82.2
Solyc01g110450.2.1	Tomato	extracellular	79.87	82.2
AT2G21250.1	Thale cress	cytosol	79.56	81.88
Bra031177.1-P	Field mustard	cytosol	79.56	81.88
CDY13825	Canola	cytosol	79.56	81.88
VIT_03s0038g00800.t01	Wine grape	cytosol	79.56	81.88
PGSC0003DMT400004180	Potato	cytosol, peroxisome, plastid	78.93	81.23
KRH24361	Soybean	endoplasmic reticulum, nucleus	78.3	80.58
AT2G21260.1	Thale cress	cytosol	77.04	79.29
HORVU6Hr1G013800.2	Barley	plastid	90.25	77.99
GSMUA_Achr9P24380_001	Banana	endoplasmic reticulum	81.13	76.33
Os02t0123500-01	Rice	plasma membrane	89.62	76.0
EES01753	Sorghum	cytosol, mitochondrion, plastid	40.57	41.61
KXG22143	Sorghum	extracellular	39.94	40.84
EES19639	Sorghum	cytosol, peroxisome, plastid	39.94	40.71
KXG22204	Sorghum	cytosol	40.25	40.13
EES01752	Sorghum	cytosol	38.99	39.87
EES01754	Sorghum	plastid	36.48	38.16
EES10886	Sorghum	cytosol	37.74	36.7
EES10888	Sorghum	mitochondrion, plastid	37.11	35.54
KXG26407	Sorghum	plastid	36.79	35.35
EES11810	Sorghum	cytosol	34.59	35.26
KXG26406	Sorghum	cytosol, peroxisome, plastid	36.48	35.15
EES10424	Sorghum	cytosol, plastid	34.59	35.03
EER91802	Sorghum	cytosol, plastid	38.36	34.27
EER94392	Sorghum	plastid	37.11	34.1
KXG22145	Sorghum	plastid	39.31	33.78
EER94390	Sorghum	cytosol	37.11	33.43
EES10887	Sorghum	plastid	33.96	32.93
KXG26405	Sorghum	plastid	37.11	32.78
EER95200	Sorghum	plastid	32.7	29.89
EER94391	Sorghum	cytosol, peroxisome, plastid	7.86	22.52

Protein Annotations

Gene3D:3.20.20.100	MapMan:3.5.1	MapMan:3.6.3	EntrezGene:8068272	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase
UniProt:C5XT35	ProteinID:CAZ96043.1	EnsemblPlants:EES06204	ProteinID:EES06204	ProteinID:EES06204.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062
ScanProsite:PS00063	ScanProsite:PS00798	PANTHER:PTHR11732	PANTHER:PTHR11732:SF209	EnsemblPlantsGene:SORBI_3004G021300	SUPFAM:SSF51430
unigene:Sbi.15172	UniParc:UPI0001A85F72	RefSeq:XP_002453228.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:-:1651064..1656081

Molecular Weight (calculated)

35345.3 Da

IEP (calculated)

6.347

GRAVY (calculated)

-0.140

Length

318 amino acids

Sequence
(BLAST)

001: MAAAAAAKDA AVTLSSGYRM PAVGLGVWRM DKPDVRGLIH AALRLGYRHL DCAADYQNEA EVGDALAEAF QTGLVKREDL FITTKLWNSD HGHVLEACKD
101: SLKKLQLDYL DLYLIHFPVA TRHTGVGTTS SALGDDGVLD IDTTISLETT WHAMEELVSM GLVRSIGISN YDIFLTRDCL AYAKIKPAVN QIEVHPYFQR
201: DSLVKFCQKH GICVTAHTPL GGSTANTEWF GSVSCLDDPV IKSLAEKYGK TPAQLVLRWG LQRNTVVIPK TSKLERLQEN FEVFDFDISG EDMEKMKAVD
301: RKYRTNQPAK FWGIDLFA

Best Arabidopsis Sequence Match ( AT2G21250.1 )
(BLAST)

001: MEITLNSGFK MPIVGLGVWR MEKEGIRDLI LNAIKIGYRH LDCAADYRNE TEVGDALTEA FKTGLVKRED LFITTKLWNS DHGHVIEACK DSLKKLQLDY
101: LDLFLVHFPV ATKHTGVGTT DSALGDDGVL DIDTTISLET TWHDMEKLVS MGLVRSIGIS NYDVFLTRDC LAYSKIKPAV NQIETHPYFQ RDSLVKFCQK
201: HGICVTAHTP LGGATANAEW FGTVSCLDDP VLKDVAEKYK KTVAQVVLRW GIQRKTVVIP KTSKPARLEE NFQVFDFELS KEDMEVIKSM ERKYRTNQPA
301: KFWNIDLYA

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SJV2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.