Factsheet for VIT_01s0010g01730.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P02880_001	Banana	cytosol	65.82	54.03
GSMUA_Achr4P25420_001	Banana	cytosol	65.82	47.26
VIT_05s0077g02180.t01	Wine grape	cytosol, peroxisome, plastid	25.82	36.04
VIT_16s0013g02110.t01	Wine grape	cytosol	36.36	35.97
VIT_08s0007g01040.t01	Wine grape	cytosol	35.64	33.79
VIT_03s0038g00800.t01	Wine grape	cytosol	37.45	33.33
VIT_01s0011g06490.t01	Wine grape	cytosol	20.73	32.57
VIT_08s0007g01050.t01	Wine grape	cytosol	37.09	32.38
VIT_08s0007g01030.t01	Wine grape	cytosol	36.36	32.15
VIT_01s0011g06510.t01	Wine grape	cytosol	33.45	29.11
VIT_01s0011g06440.t01	Wine grape	cytosol, peroxisome, plastid	33.45	28.93
VIT_08s0058g00650.t01	Wine grape	cytosol	33.45	28.57
VIT_18s0001g09570.t01	Wine grape	cytosol, nucleus, peroxisome	33.45	28.57
VIT_01s0011g06430.t01	Wine grape	cytosol	35.27	28.28
VIT_01s0011g06500.t01	Wine grape	extracellular	32.36	28.16
VIT_01s0011g06450.t01	Wine grape	cytosol, peroxisome, plastid	32.73	28.04
VIT_01s0011g06460.t01	Wine grape	cytosol, extracellular, peroxisome	31.64	27.71
VIT_05s0077g02190.t01	Wine grape	cytosol	32.0	27.67
VIT_05s0077g02150.t01	Wine grape	cytosol	30.55	27.63
VIT_08s0007g01020.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	36.0	26.9
VIT_01s0011g06470.t01	Wine grape	cytosol	34.91	21.38

Protein Annotations

EntrezGene:100249597	wikigene:100249597	Gene3D:3.20.20.100	MapMan:50.1.1	EMBL:AM431966	InterPro:Aldo/ket_reductase_CS
InterPro:Aldo/keto_reductase	ProteinID:CAN71558	ProteinID:CAN71558.1	ProteinID:CCB51205	ProteinID:CCB51205.1	UniProt:F6HG12
EMBL:FN595754	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:IPR036812	EntrezGene:LOC100249597	wikigene:LOC100249597	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf
PFAM:PF00248	PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062	PANTHER:PTHR11732	PANTHER:PTHR11732:SF368
SUPFAM:SSF51430	UniParc:UPI0002109617	ArrayExpress:VIT_01s0010g01730	EnsemblPlantsGene:VIT_01s0010g01730	EnsemblPlants:VIT_01s0010g01730.t01	RefSeq:XP_002273213
RefSeq:XP_002273213.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1:-:18098640..18106880

Molecular Weight (calculated)

30040.1 Da

IEP (calculated)

9.130

GRAVY (calculated)

-0.314

Length

275 amino acids

Sequence
(BLAST)

001: MKGKGGAPGT YFLLNTKAKI PAIGLGTWQS GGDLCVEAVK RALSEGYRQI DCAHLYGNEV EVGEALAEAF NGSLKREDVF LTSKLYCTMN SLNKIENSVR
101: VSLKNLGVTY LDLYLMHWPD ITAFGDATDP PSNSGNDHRQ FLNRLKKAWK AMEGLIELGL VRAIGVSNFG VQQIKELLKF AKIVPAVNQA ELHPFWRQDE
201: LVKFCQSKGI HVSAHTPLGV PASGPGPSDS GSGGEDEPGT PRISFRRSRS VHGPMLKLSV VAEIADRHKK TPEQR

Best Arabidopsis Sequence Match ( AT2G37770.1 )
(BLAST)

001: MANAITFFKL NTGAKFPSVG LGTWQASPGL VGDAVAAAVK IGYRHIDCAQ IYGNEKEIGA VLKKLFEDRV VKREDLFITS KLWCTDHDPQ DVPEALNRTL
101: KDLQLEYVDL YLIHWPARIK KGSVGIKPEN LLPVDIPSTW KAMEALYDSG KARAIGVSNF STKKLADLLE LARVPPAVNQ VECHPSWRQT KLQEFCKSKG
201: VHLSVSITRL TNPFTFYFIH SLNDFFFPGI LAIRFSRDNM AEERCFEEPD TEYGCGKTRK ESCASRPSLG TPNGSQCASQ EYK

Arabidopsis Description

AKR4C9NADPH-dependent aldo-keto reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0PGJ6]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.