Factsheet for VIT_08s0007g01050.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00045	Soybean	cytosol	83.17	82.39
KRH49170	Soybean	cytosol	74.92	78.93
VIT_08s0007g01040.t01	Wine grape	cytosol	60.95	66.21
VIT_08s0007g01030.t01	Wine grape	cytosol	61.9	62.7
VIT_08s0007g01020.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	62.22	53.26
VIT_01s0011g06440.t01	Wine grape	cytosol, peroxisome, plastid	45.08	44.65
VIT_05s0077g02190.t01	Wine grape	cytosol	43.17	42.77
VIT_16s0013g02110.t01	Wine grape	cytosol	37.14	42.09
VIT_18s0001g09570.t01	Wine grape	cytosol, nucleus, peroxisome	42.86	41.93
VIT_08s0058g00650.t01	Wine grape	cytosol	42.22	41.3
VIT_01s0011g06460.t01	Wine grape	cytosol, extracellular, peroxisome	40.63	40.76
VIT_01s0011g06450.t01	Wine grape	cytosol, peroxisome, plastid	40.63	39.88
VIT_05s0077g02150.t01	Wine grape	cytosol	38.41	39.8
VIT_05s0077g02180.t01	Wine grape	cytosol, peroxisome, plastid	24.76	39.59
VIT_01s0011g06430.t01	Wine grape	cytosol	42.86	39.36
VIT_03s0038g00800.t01	Wine grape	cytosol	38.41	39.16
VIT_01s0011g06490.t01	Wine grape	cytosol	20.95	37.71
VIT_01s0011g06510.t01	Wine grape	cytosol	37.78	37.66
VIT_01s0010g01730.t01	Wine grape	cytosol	32.38	37.09
VIT_01s0011g06500.t01	Wine grape	extracellular	36.83	36.71
VIT_01s0011g06470.t01	Wine grape	cytosol	43.49	30.51

Protein Annotations

EntrezGene:100244158	wikigene:100244158	Gene3D:3.20.20.100	MapMan:50.1.1	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase
ProteinID:CBI30494	ProteinID:CBI30494.3	UniProt:D7THH8	EMBL:FN595991	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	EntrezGene:LOC100244158
wikigene:LOC100244158	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PIRSF:PIRSF000097	PRINTS:PR00069
ScanProsite:PS00062	ScanProsite:PS00063	ScanProsite:PS00798	PANTHER:PTHR11732	PANTHER:PTHR11732:SF279	SUPFAM:SSF51430
UniParc:UPI00015C939A	ArrayExpress:VIT_08s0007g01050	EnsemblPlantsGene:VIT_08s0007g01050	EnsemblPlants:VIT_08s0007g01050.t01	RefSeq:XP_002273139	RefSeq:XP_002273139.1
RefSeq:XP_010654238.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr8:+:15157629..15160502

Molecular Weight (calculated)

35070.8 Da

IEP (calculated)

6.182

GRAVY (calculated)

-0.243

Length

315 amino acids

Sequence
(BLAST)

001: MDEESELYFE LNTGAKMPSI GLGTWKAPPG VVGEAVIAAV KAGYRHIDCA RVYDNEKEIG AALKEVFSNG VVKRNEIWIT SKLWCSDHAP EDVSRALSKS
101: LEDLQLDYID LYLIHWPFRT QPGSRGWDPD VMAPLCLSET WTAMEGLYAS GQARAIGVSN FSTKKLQDLL IYSKVPPAVV QVECHPVWQQ TALHNLCKST
201: GVHLSAYSPL GSPGSWVKGE ILKEPKLLEV AEKLNKSPAQ VALRWGIQSG HSVLPKSVHE SRIKENFSLF DWSIPPELFS KFSAIHQQRL LRGDSAVHES
301: CSPYKSLEEL WDGEI

Best Arabidopsis Sequence Match ( AT2G37770.2 )
(BLAST)

001: MANAITFFKL NTGAKFPSVG LGTWQASPGL VGDAVAAAVK IGYRHIDCAQ IYGNEKEIGA VLKKLFEDRV VKREDLFITS KLWCTDHDPQ DVPEALNRTL
101: KDLQLEYVDL YLIHWPARIK KGSVGIKPEN LLPVDIPSTW KAMEALYDSG KARAIGVSNF STKKLADLLE LARVPPAVNQ VECHPSWRQT KLQEFCKSKG
201: VHLSAYSPLG SPGTTWLKSD VLKNPILNMV AEKLGKSPAQ VALRWGLQMG HSVLPKSTNE GRIKENFNVF DWSIPDYMFA KFAEIEQARL VTGSFLVHET
301: LSPYKSIEEL WDGEI

Arabidopsis Description

AKR4C9NADPH-dependent aldo-keto reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0PGJ6]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.