Factsheet for PGSC0003DMT400047408

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g042470.1.1	Tomato	plastid	75.62	74.02
PGSC0003DMT400079684	Potato	cytosol	64.81	67.09
VIT_05s0077g02190.t01	Wine grape	cytosol	63.27	64.47
VIT_18s0001g09570.t01	Wine grape	cytosol, nucleus, peroxisome	63.89	64.29
VIT_05s0077g02150.t01	Wine grape	cytosol	58.95	62.83
KRH09512	Soybean	cytosol	60.49	61.25
KRH09516	Soybean	cytosol	52.16	60.36
VIT_05s0077g02180.t01	Wine grape	cytosol, peroxisome, plastid	36.42	59.9
KRH38984	Soybean	cytosol	58.33	59.43
KRH38981	Soybean	cytosol	56.48	58.84
KRH09515	Soybean	cytosol	56.17	56.52
GSMUA_Achr1P22080_001	Banana	cytosol, peroxisome	44.14	55.64
GSMUA_Achr1P22090_001	Banana	mitochondrion	53.4	54.4
PGSC0003DMT400058309	Potato	cytosol	51.54	51.23
PGSC0003DMT400038402	Potato	cytoskeleton, cytosol, peroxisome	43.83	45.08
PGSC0003DMT400089951	Potato	cytoskeleton, cytosol, peroxisome	43.21	44.44
PGSC0003DMT400091735	Potato	cytoskeleton, cytosol, peroxisome	43.21	44.44
PGSC0003DMT400092283	Potato	cytosol	29.63	42.48
PGSC0003DMT400030366	Potato	cytosol	40.74	41.38
PGSC0003DMT400022952	Potato	cytosol	40.43	41.32
PGSC0003DMT400022949	Potato	cytosol, peroxisome, plastid	40.43	40.68
PGSC0003DMT400087169	Potato	cytosol, peroxisome, plastid	28.7	40.26
PGSC0003DMT400004180	Potato	cytosol, peroxisome, plastid	34.88	36.57
GSMUA_Achr1P22070_001	Banana	nucleus, peroxisome	40.74	18.97

Protein Annotations

EntrezGene:102601965	Gene3D:3.20.20.100	MapMan:50.1.1	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:IPR036812	UniProt:M1BKP9	InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	EnsemblPlantsGene:PGSC0003DMG401018424
PGSC:PGSC0003DMG401018424	EnsemblPlants:PGSC0003DMT400047408	PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062	ScanProsite:PS00063
ScanProsite:PS00798	PANTHER:PTHR11732	PANTHER:PTHR11732:SF239	SUPFAM:SSF51430	UniParc:UPI000295BDD5	RefSeq:XP_006355107.1

Description

Chalcone reductase [Source:PGSC_GENE;Acc:PGSC0003DMG401018424]

Coordinates

chr5:-:4489996..4494218

Molecular Weight (calculated)

36444.1 Da

IEP (calculated)

6.318

GRAVY (calculated)

-0.173

Length

324 amino acids

Sequence
(BLAST)

001: MAMLVPKIML NSGHEMPLIG MGTAPTAPTL PPIDQLVSIF IDAIEAGYRH FDTAAAYGSE EALGRAVADA IQRGLIESRE DVFITSKLWC TETHHDLVLP
101: ALKRSLARLG MDYLDLYHIH WPVRMKNGSD QGIKLVNEDV IPFDMKGTWE AMEECHKLGL AKSIGVCNFS CTKLSQLLTH ATIPPAVNQV EMHVAWRQEK
201: MLAFCKEKGI HVSAWSPLGA NGIPFWGNHA VMQNSVLKDI AFHRQKSIPQ VALRWVYEQG VSVLVKSFNK DRMKENLQIL DWELSNEENA KIQEIPQCRG
301: FKGELFVHPD GPYKSPDEFW DGEL

Best Arabidopsis Sequence Match ( AT1G59960.1 )
(BLAST)

001: MSLTTVPTLA IRSGPSGHHS MPVLGFGTAA SPLPEPTMLK ETVIEAIKLG YRHFDTSPRY QTEEPIGEAL AEAVSLGLVR SRSEFFVTTK LWCADAHGGL
101: VVPAIKRSLK NLKLDYLDLY IIHWPVSSKP GKYKFPIDED DFMPMDFEVV WSEMEECQRL GLAKCIGVSN FSCKKLQHIL SIATIPPSVN QVEMSPIWQQ
201: RKLRELCRSN DIVVTAYSVL GSRGAFWGTP KIMESDVLKE IAEAKEKTVA QVSMRWAYEQ GVSMVVKSFT KERLEENLKI FDWSLTEDET QRISTEIPQF
301: RNVHGEVYTS KKGPIKSVAE MWDGEI

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SXC0]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.