Factsheet for Solyc12g042470.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047408	Potato	cytosol	74.02	75.62
Solyc03g098100.2.1	Tomato	plastid	38.67	65.64
VIT_18s0001g09570.t01	Wine grape	cytosol, nucleus, peroxisome	61.63	63.35
VIT_05s0077g02150.t01	Wine grape	cytosol	56.19	61.18
VIT_05s0077g02190.t01	Wine grape	cytosol	58.61	61.01
VIT_05s0077g02180.t01	Wine grape	cytosol, peroxisome, plastid	36.25	60.91
KRH09512	Soybean	cytosol	57.7	59.69
KRH38984	Soybean	cytosol	56.19	58.49
KRH38981	Soybean	cytosol	54.08	57.56
KRH09516	Soybean	cytosol	47.73	56.43
KRH09515	Soybean	cytosol	52.87	54.35
GSMUA_Achr1P22090_001	Banana	mitochondrion	50.45	52.52
GSMUA_Achr1P22080_001	Banana	cytosol, peroxisome	40.48	52.14
Solyc04g008440.1.1	Tomato	plastid	47.73	49.84
Solyc03g093280.1.1	Tomato	cytosol	42.9	45.08
Solyc03g093270.2.1	Tomato	cytoskeleton, cytosol, peroxisome	42.6	44.76
Solyc03g093290.2.1	Tomato	cytosol	38.97	44.33
Solyc01g110450.2.1	Tomato	extracellular	37.16	39.81
Solyc09g015070.2.1	Tomato	cytosol	38.07	39.5
Solyc09g011240.2.1	Tomato	extracellular, unclear	37.46	39.12
GSMUA_Achr1P22070_001	Banana	nucleus, peroxisome	38.07	18.1

Protein Annotations

Gene3D:3.20.20.100	MapMan:50.1.1	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036812	UniProt:K4DF39
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062
ScanProsite:PS00063	ScanProsite:PS00798	PANTHER:PTHR11732	PANTHER:PTHR11732:SF239	SUPFAM:SSF51430	EnsemblPlantsGene:Solyc12g042470.1
EnsemblPlants:Solyc12g042470.1.1	UniParc:UPI000276AB25	:	:	:	:

Description

No Description!

Coordinates

chr12:-:40110682..40114163

Molecular Weight (calculated)

37502.8 Da

IEP (calculated)

6.949

GRAVY (calculated)

-0.144

Length

331 amino acids

Sequence
(BLAST)

001: MTMNLIKQML VPNVNLNSGH KMPLIGMGTA PSLPEHDQLV STLIDAIEIG YRHFDTAAVY GSEEALGQAV VEAIQRGLIK SREQVFITSK LWCTETHRHL
101: VLPALKRTLG RLKMDYLDLY LIHLPVTMKK KVNSKDDEMR VDKEDIIPFD MRGTWEAMEE CCRLGLAKSI GVSNFTCTKI SQILHYATIL PAVNQVEMHV
201: AWRQEKMLEF CKEKGIHVSA WSPLGANGLT PWGIHSVMES PVLKDIAIHK RKSVAQVALR WVYEQGASVI VKSFNKERMK ENLQILDWEL SNEEIAQIQE
301: IPPCTGFNVD MVLVHPNGPY KSANQFWDGE I

Best Arabidopsis Sequence Match ( AT1G59960.1 )
(BLAST)

001: MSLTTVPTLA IRSGPSGHHS MPVLGFGTAA SPLPEPTMLK ETVIEAIKLG YRHFDTSPRY QTEEPIGEAL AEAVSLGLVR SRSEFFVTTK LWCADAHGGL
101: VVPAIKRSLK NLKLDYLDLY IIHWPVSSKP GKYKFPIDED DFMPMDFEVV WSEMEECQRL GLAKCIGVSN FSCKKLQHIL SIATIPPSVN QVEMSPIWQQ
201: RKLRELCRSN DIVVTAYSVL GSRGAFWGTP KIMESDVLKE IAEAKEKTVA QVSMRWAYEQ GVSMVVKSFT KERLEENLKI FDWSLTEDET QRISTEIPQF
301: RNVHGEVYTS KKGPIKSVAE MWDGEI

Arabidopsis Description

NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SXC0]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.