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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: unclear, extracellular

Predictor Summary:
  • cytosol 5
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, unclear
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 unclear: 26455813
extracellular: 29876421
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID: 26455813 doi
P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400022952 Potato cytosol 94.32 94.32
PGSC0003DMT400022949 Potato cytosol, peroxisome, plastid 92.74 91.3
KRH65915 Soybean cytosol 74.13 74.6
AT2G37790.1 Thale cress cytosol 73.19 73.89
Bra000018.1-P Field mustard cytosol, peroxisome, plastid 72.87 73.33
CDY07771 Canola cytosol, peroxisome, plastid 72.87 73.33
KRH75705 Soybean cytosol 72.56 73.02
Bra005159.1-P Field mustard cytosol 72.24 72.7
CDY64988 Canola cytosol, peroxisome, plastid 72.24 72.7
CDY57141 Canola cytosol 73.82 72.67
CDX74934 Canola cytosol 71.92 72.38
CDY59481 Canola cytosol, peroxisome, plastid 71.92 72.38
Bra005162.1-P Field mustard cytosol, peroxisome, plastid 70.66 72.26
Bra000019.1-P Field mustard cytosol, peroxisome, plastid 71.61 72.06
VIT_08s0007g01040.t01 Wine grape cytosol 65.3 71.38
AT2G37770.2 Thale cress cytosol, peroxisome, plastid 70.66 71.11
HORVU3Hr1G085800.1 Barley cytosol 7.57 70.59
CDY07770 Canola cytosol 68.14 70.59
EES01753 Sorghum cytosol, mitochondrion, plastid 68.77 70.32
Bra005161.1-P Field mustard cytosol 69.09 69.97
CDX74935 Canola cytosol, nucleus, peroxisome 56.78 69.5
CDY54027 Canola cytosol 67.82 69.13
Bra007032.1-P Field mustard cytosol 67.82 69.13
Zm00001d042869_P001 Maize extracellular 67.51 69.03
TraesCS1A01G282600.1 Wheat unclear 67.19 68.93
CDX73517 Canola cytosol 67.51 68.81
VIT_08s0007g01030.t01 Wine grape cytosol 67.19 68.49
TraesCS1B01G291500.1 Wheat cytosol 66.56 68.28
Os01t0847700-01 Rice plasma membrane 66.88 68.17
CDY57143 Canola endoplasmic reticulum 54.57 68.11
CDY59483 Canola cytosol 54.26 67.98
EES01752 Sorghum cytosol 66.56 67.85
TraesCS1D01G281700.1 Wheat cytosol, peroxisome, plastid 64.67 67.66
TraesCS1D01G281800.1 Wheat unclear 65.93 67.64
TraesCS3B01G395600.1 Wheat golgi 66.25 67.52
Os01t0847600-01 Rice cytosol 66.25 67.52
TraesCS3D01G041300.1 Wheat cytosol, mitochondrion, plastid 65.93 67.42
TraesCS3B01G045400.1 Wheat cytosol 65.93 67.42
TraesCS3A01G038400.1 Wheat cytosol, mitochondrion, plastid 65.93 67.42
AT3G53880.1 Thale cress cytosol 66.88 67.3
TraesCS3A01G363400.1 Wheat cytosol, peroxisome, plastid 65.93 67.2
TraesCS1A01G282200.1 Wheat cytosol 41.96 67.17
TraesCS3D01G356900.1 Wheat cytosol 64.98 66.24
TraesCS1B01G026600.2 Wheat mitochondrion 64.67 66.13
TraesCS1A01G282400.1 Wheat cytosol 63.09 66.01
Zm00001d010054_P001 Maize extracellular 64.67 65.71
Os05t0456300-01 Rice cytosol, mitochondrion, peroxisome, plastid 67.51 65.64
TraesCS1A01G021900.1 Wheat cytosol 32.18 65.38
TraesCS1B01G028300.1 Wheat cytosol 35.33 65.12
EES19639 Sorghum cytosol, peroxisome, plastid 64.04 65.06
TraesCS1B01G291400.1 Wheat plastid 64.04 64.86
TraesCS1D01G281500.1 Wheat cytosol, peroxisome, plastid 64.04 64.86
TraesCS1D01G021100.1 Wheat mitochondrion 63.41 64.84
TraesCS1B01G027200.1 Wheat mitochondrion 63.41 64.84
KRH00040 Soybean mitochondrion 58.04 63.89
TraesCS1B01G291200.1 Wheat cytosol 62.78 63.58
TraesCS1D01G281300.1 Wheat cytosol 62.15 63.55
EES01754 Sorghum plastid 60.88 63.49
TraesCS1A01G282000.1 Wheat cytosol 62.46 63.26
TraesCS7D01G240400.1 Wheat plastid 60.57 63.16
TraesCS1A01G281900.1 Wheat cytosol 41.01 63.11
TraesCS1B01G025100.2 Wheat cytosol 61.83 63.02
GSMUA_Achr5P28750_001 Banana golgi, mitochondrion, peroxisome, plastid 69.09 62.93
TraesCS1D01G281600.1 Wheat cytosol 63.72 62.93
Os01t0847800-02 Rice cytosol, peroxisome, plastid 59.62 62.17
HORVU1Hr1G072670.1 Barley cytosol 60.88 62.06
HORVU1Hr1G072690.2 Barley plastid 41.96 61.86
TraesCS1B01G291100.1 Wheat cytosol 60.57 61.74
TraesCS1D01G281200.1 Wheat cytosol 60.57 61.74
KXG22143 Sorghum extracellular 60.25 61.41
TraesCS3B01G395700.1 Wheat plastid 58.99 61.31
TraesCS3A01G363500.1 Wheat plastid 58.99 61.31
TraesCS3D01G357000.1 Wheat plastid 58.68 60.98
TraesCS7B01G136900.1 Wheat plastid 58.36 60.86
TraesCS7A01G241400.1 Wheat cytosol 61.2 60.06
HORVU1Hr1G072680.1 Barley cytosol, peroxisome 49.53 59.47
TraesCS1D01G022400.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 63.09 59.35
TraesCS1B01G027700.2 Wheat cytosol, peroxisome, plastid 64.98 58.69
Zm00001d042868_P001 Maize cytosol, mitochondrion, peroxisome, plastid 45.43 57.6
Os05t0456200-00 Rice cytosol 43.85 57.44
HORVU3Hr1G085780.14 Barley cytosol, mitochondrion, peroxisome 58.36 56.57
HORVU3Hr1G007410.5 Barley plastid 65.93 56.33
KXG22145 Sorghum plastid 64.98 55.68
HORVU1Hr1G072700.20 Barley plastid 65.62 53.89
TraesCS1A01G282300.2 Wheat mitochondrion 53.0 51.85
Zm00001d038365_P002 Maize mitochondrion 58.36 51.53
Solyc03g098100.2.1 Tomato plastid 28.71 46.67
Solyc09g015070.2.1 Tomato cytosol 43.53 43.26
Solyc04g008440.1.1 Tomato plastid 41.96 41.96
Solyc03g093280.1.1 Tomato cytosol 41.64 41.9
Solyc03g093290.2.1 Tomato cytosol 37.22 40.55
Solyc03g093270.2.1 Tomato cytoskeleton, cytosol, peroxisome 40.06 40.32
CDY57148 Canola cytosol, peroxisome, plastid 71.92 38.0
Solyc12g042470.1.1 Tomato plastid 39.12 37.46
Solyc01g110450.2.1 Tomato extracellular 35.33 36.25
Protein Annotations
Gene3D:3.20.20.100MapMan:50.1.1InterPro:Aldo/ket_reductase_CSInterPro:Aldo/keto_reductaseGO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114InterPro:IPR036812UniProt:K4CRF0
InterPro:NADP_OxRdtase_domInterPro:NADP_OxRdtase_dom_sfPFAM:PF00248PIRSF:PIRSF000097PRINTS:PR00069ScanProsite:PS00062
ScanProsite:PS00063ScanProsite:PS00798PANTHER:PTHR11732PANTHER:PTHR11732:SF386SUPFAM:SSF51430EnsemblPlantsGene:Solyc09g011240.2
EnsemblPlants:Solyc09g011240.2.1UniParc:UPI000276B144::::
Description
No Description!
Coordinates
chr9:+:4573233..4578442
Molecular Weight (calculated)
35570.8 Da
IEP (calculated)
6.721
GRAVY (calculated)
-0.307
Length
317 amino acids
Sequence
(BLAST)
001: MAEATEMPYI ELNTGFSIPA VGLGTWQSDP GVVGKAVETA IKMGYRHIDC AQIYKNEKEI GEVLSRLFKD GVVKRRELFI TSKLWNTNHA PEDVPVALDK
101: TLQDLQLEYV DLYLIHWPVS MKPGSVDFKP ENLMPTNIPR IWEAMEKVYD SGKARVIGVS NFSTKKLEDL LQVARTPPAV NQVECHPSWQ QAKLRELCKS
201: NNVHLSAYSP LGSPGTTWLK SDVLKQPAVI SVAEKLGKTP AQVCLRWGIQ MGQSVLPKST HEARIKENLD VLNWSIPDDL LAKFSEIPQA RLLKGASFAH
301: ETHGQYRTLE ELWDGEI
Best Arabidopsis Sequence Match ( AT2G37790.1 )
(BLAST)
001: MAEEIRFFEL NTGAKIPSVG LGTWQADPGL VGNAVDAAVK IGYRHIDCAQ IYGNEKEIGL VLKKLFDGGV VKREEMFITS KLWCTYHDPQ EVPEALNRTL
101: QDLQLDYVDL YLIHWPVSLK KGSTGFKPEN ILPTDIPSTW KAMESLFDSG KARAIGVSNF SSKKLADLLV VARVPPAVNQ VECHPSWQQN VLRDFCKSKG
201: VHLSGYSPLG SPGTTWLTSD VLKNPILGGV AEKLGKTPAQ VALRWGLQMG QSVLPKSTHE DRIKQNFDVF NWSIPEDMLS KFSEIGQGRL VRGMSFVHET
301: SPYKSLEELW DGEI
Arabidopsis Description
AKR4C10Aldo-keto reductase family 4 member C10 [Source:UniProtKB/Swiss-Prot;Acc:Q84TF0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.