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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • peroxisome 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, peroxisome, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:peroxisome
TargetP:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G291500.1 Wheat cytosol 75.39 94.17
TraesCS1D01G281800.1 Wheat unclear 75.13 93.85
TraesCS1A01G282600.1 Wheat unclear 74.35 92.88
HORVU3Hr1G085800.1 Barley cytosol 8.03 91.18
Os05t0456300-01 Rice cytosol, mitochondrion, peroxisome, plastid 67.1 79.45
KXG22145 Sorghum plastid 67.88 70.81
VIT_08s0007g01040.t01 Wine grape cytosol 52.33 69.66
KRH75705 Soybean cytosol 56.48 69.21
CDY07771 Canola cytosol, peroxisome, plastid 56.48 69.21
Bra000018.1-P Field mustard cytosol, peroxisome, plastid 56.22 68.89
Bra000019.1-P Field mustard cytosol, peroxisome, plastid 56.22 68.89
CDY59481 Canola cytosol, peroxisome, plastid 55.96 68.57
CDY64988 Canola cytosol, peroxisome, plastid 55.96 68.57
KRH65915 Soybean cytosol 55.7 68.25
Bra005161.1-P Field mustard cytosol 54.92 67.73
CDY07770 Canola cytosol 53.63 67.65
AT2G37770.2 Thale cress cytosol, peroxisome, plastid 55.18 67.62
Bra005162.1-P Field mustard cytosol, peroxisome, plastid 54.15 67.42
AT2G37790.1 Thale cress cytosol 54.66 67.2
CDX74934 Canola cytosol 54.15 66.35
Bra005159.1-P Field mustard cytosol 54.15 66.35
CDY54027 Canola cytosol 53.37 66.24
Bra007032.1-P Field mustard cytosol 53.37 66.24
KRH65857 Soybean nucleus 53.63 66.13
CDX74935 Canola cytosol, nucleus, peroxisome 44.3 66.02
KRH00040 Soybean mitochondrion 49.22 65.97
HORVU1Hr1G072670.1 Barley cytosol 53.11 65.92
CDY57141 Canola cytosol 54.92 65.84
KRH75702 Soybean nucleus 53.37 65.81
Solyc09g011240.2.1 Tomato extracellular, unclear 53.89 65.62
CDX73517 Canola cytosol 52.85 65.59
AT3G53880.1 Thale cress cytosol 53.11 65.08
GSMUA_Achr5P28750_001 Banana golgi, mitochondrion, peroxisome, plastid 58.03 64.37
PGSC0003DMT400022952 Potato cytosol 52.85 64.35
KRH65858 Soybean nucleus 52.07 64.22
CDY57143 Canola endoplasmic reticulum 41.97 63.78
HORVU1Hr1G072690.2 Barley plastid 35.49 63.72
VIT_08s0007g01030.t01 Wine grape cytosol 51.3 63.67
PGSC0003DMT400022949 Potato cytosol, peroxisome, plastid 53.11 63.66
Zm00001d038365_P002 Maize mitochondrion 58.55 62.95
CDY57149 Canola cytosol 49.74 61.74
CDY57153 Canola cytosol 49.74 61.74
CDY59483 Canola cytosol 40.41 61.66
CDY64989 Canola cytosol, nucleus, peroxisome 49.22 61.49
CDY69395 Canola cytosol 47.93 61.46
Bra005163.1-P Field mustard cytosol 47.93 61.46
AT2G37760.1 Thale cress cytosol 49.48 61.41
CDY57151 Canola cytosol 48.19 61.39
HORVU1Hr1G072680.1 Barley cytosol, peroxisome 41.97 61.36
HORVU3Hr1G085780.14 Barley cytosol, mitochondrion, peroxisome 51.81 61.16
HORVU3Hr1G007410.5 Barley plastid 57.51 59.84
KRH65854 Soybean cytosol 47.67 58.79
KRH75700 Soybean cytosol, nucleus, peroxisome 34.97 58.7
VIT_08s0007g01020.t01 Wine grape golgi, mitochondrion, peroxisome, plastid 52.07 54.62
HORVU4Hr1G064720.1 Barley cytosol 35.49 43.63
HORVU2Hr1G000140.3 Barley cytosol, peroxisome 18.65 40.91
HORVU1Hr1G070310.10 Barley cytosol, peroxisome, plastid 33.16 36.47
CDY57148 Canola cytosol, peroxisome, plastid 55.44 35.67
HORVU2Hr1G078570.8 Barley plastid 32.64 33.96
HORVU6Hr1G013800.2 Barley plastid 32.12 33.7
Protein Annotations
Gene3D:3.20.20.100MapMan:50.1.1UniProt:A0A287G731InterPro:Aldo/ket_reductase_CSInterPro:Aldo/keto_reductaseGO:GO:0003674
GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:HORVU1Hr1G072700
EnsemblPlants:HORVU1Hr1G072700.20InterPro:IPR036812InterPro:NADP_OxRdtase_domInterPro:NADP_OxRdtase_dom_sfPFAM:PF00248PRINTS:PR00069
ScanProsite:PS00062ScanProsite:PS00063ScanProsite:PS00798PANTHER:PTHR11732PANTHER:PTHR11732:SF386SUPFAM:SSF51430
UniParc:UPI000B46A893:::::
Description
No Description!
Coordinates
chrchr1H:-:498695041..498696993
Molecular Weight (calculated)
42066.6 Da
IEP (calculated)
7.749
GRAVY (calculated)
-0.081
Length
386 amino acids
Sequence
(BLAST)
001: TGTCCMSAAA SASPVIARQV NRRTPRLGLY KLARVSGMGA LGRLLPSARA LASVGERQGM ALHFVLNTGA KIPSVGLGTW QSEPGVVGDA VYAAVKAGYR
101: HIDCAQVYGN EKEIGFALKK VFDEGVTTRK DLFITSKLWC TNHAPEDVPV ALDGTLQDLQ TDYVDLYLVH WPIRMKKGAG FNPENVIPAD IPATWAAMES
201: LYDSGKARAI GVSNFSCKKV EELLAVARVT PAANQVECHP VWQQAKLRDL CASKGIHFSF PQCVVEHLEC APMMRMQAYS PLGSPGTFKA FSVLEHPVVV
301: STAEKLGKTP AQVALRWGVQ AGHSVLPKST NEERIRANID VYDWSIPGDL FAGFSEIEQA KLIRGKFWTH PEGVFKSEEE IWDGEI
Best Arabidopsis Sequence Match ( AT2G37760.1 )
(BLAST)
001: MAAPIRFFEL NTGAKLPCVG LGTYAMVATA IEQAIKIGYR HIDCASIYGN EKEIGGVLKK LIGDGFVKRE ELFITSKLWS NDHLPEDVPK ALEKTLQDLQ
101: IDYVDLYLIH WPASLKKESL MPTPEMLTKP DITSTWKAME ALYDSGKARA IGVSNFSSKK LTDLLNVARV TPAVNQVECH PVWQQQGLHE LCKSKGVHLS
201: GYSPLGSQSK GEVRLKVLQN PIVTEVAEKL GKTTAQVALR WGLQTGHSVL PKSSSGARLK ENLDVFDWSI PEDLFTKFSN IPQEKFCRAT EFAHETHGFY
301: KTIEELWDGE I
Arabidopsis Description
AKR4C8Aldo-keto reductase family 4 member C8 [Source:UniProtKB/Swiss-Prot;Acc:O80944]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.