CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 5
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65857	Soybean	nucleus	94.25	94.25
KRH65858	Soybean	nucleus	85.94	85.94
KRH65915	Soybean	cytosol	77.32	76.83
KRH75705	Soybean	cytosol	77.0	76.51
HORVU3Hr1G085800.1	Barley	cytosol	7.99	73.53
KRH00040	Soybean	mitochondrion	66.77	72.57
Os01t0847700-01	Rice	plasma membrane	70.29	70.74
KRH75700	Soybean	cytosol, nucleus, peroxisome	51.76	70.43
KRH65854	Soybean	cytosol	70.29	70.29
Os01t0847600-01	Rice	cytosol	69.33	69.77
EES01753	Sorghum	cytosol, mitochondrion, plastid	69.01	69.68
TraesCS3D01G041300.1	Wheat	cytosol, mitochondrion, plastid	68.37	69.03
Zm00001d042869_P001	Maize	extracellular	68.05	68.71
TraesCS3B01G045400.1	Wheat	cytosol	68.05	68.71
TraesCS3A01G038400.1	Wheat	cytosol, mitochondrion, plastid	68.05	68.71
TraesCS3A01G363400.1	Wheat	cytosol, peroxisome, plastid	68.05	68.49
TraesCS3B01G395600.1	Wheat	golgi	68.05	68.49
AT2G37760.1	Thale cress	cytosol	67.41	67.85
TraesCS1A01G282600.1	Wheat	unclear	66.77	67.64
TraesCS3D01G356900.1	Wheat	cytosol	67.09	67.52
TraesCS1D01G281800.1	Wheat	unclear	66.45	67.31
TraesCS1B01G291500.1	Wheat	cytosol	66.45	67.31
CDY57149	Canola	cytosol	66.77	67.2
CDY57153	Canola	cytosol	66.77	67.2
Bra005163.1-P	Field mustard	cytosol	64.54	67.11
EES01752	Sorghum	cytosol	66.45	66.88
CDY69395	Canola	cytosol	64.22	66.78
CDY64989	Canola	cytosol, nucleus, peroxisome	65.81	66.67
TraesCS3A01G363500.1	Wheat	plastid	64.86	66.56
TraesCS3D01G357000.1	Wheat	plastid	64.54	66.23
TraesCS3B01G395700.1	Wheat	plastid	64.54	66.23
TraesCS1D01G281300.1	Wheat	cytosol	65.5	66.13
Os01t0847800-02	Rice	cytosol, peroxisome, plastid	64.22	66.12
Os05t0456300-01	Rice	cytosol, mitochondrion, peroxisome, plastid	68.69	65.95
TraesCS1B01G291400.1	Wheat	plastid	65.81	65.81
TraesCS7D01G240400.1	Wheat	plastid	63.9	65.79
CDY57151	Canola	cytosol	63.58	65.68
TraesCS1A01G282000.1	Wheat	cytosol	65.5	65.5
TraesCS1B01G291200.1	Wheat	cytosol	65.5	65.5
EES01754	Sorghum	plastid	63.58	65.46
TraesCS1D01G281700.1	Wheat	cytosol, peroxisome, plastid	63.26	65.35
TraesCS1A01G282400.1	Wheat	cytosol	63.26	65.35
TraesCS1D01G021100.1	Wheat	mitochondrion	64.54	65.16
TraesCS1A01G282200.1	Wheat	cytosol	41.21	65.15
TraesCS1A01G281900.1	Wheat	cytosol	42.81	65.05
TraesCS1D01G281500.1	Wheat	cytosol, peroxisome, plastid	64.86	64.86
EES19639	Sorghum	cytosol, peroxisome, plastid	64.54	64.74
TraesCS1A01G021900.1	Wheat	cytosol	32.27	64.74
TraesCS1B01G291100.1	Wheat	cytosol	64.22	64.63
TraesCS1B01G027200.1	Wheat	mitochondrion	63.9	64.52
KXG22143	Sorghum	extracellular	63.9	64.31
Zm00001d010054_P001	Maize	extracellular	63.9	64.1
TraesCS1D01G281200.1	Wheat	cytosol	63.58	63.99
TraesCS1B01G025100.2	Wheat	cytosol	63.58	63.99
TraesCS1B01G026600.2	Wheat	mitochondrion	63.26	63.87
TraesCS1D01G281600.1	Wheat	cytosol	65.5	63.86
TraesCS7B01G136900.1	Wheat	plastid	61.66	63.49
TraesCS1B01G028300.1	Wheat	cytosol	34.82	63.37
HORVU1Hr1G072670.1	Barley	cytosol	62.62	63.02
GSMUA_Achr5P28750_001	Banana	golgi, mitochondrion, peroxisome, plastid	69.97	62.93
HORVU1Hr1G072690.2	Barley	plastid	42.81	62.33
KRH00045	Soybean	cytosol	63.26	62.26
HORVU3Hr1G085780.14	Barley	cytosol, mitochondrion, peroxisome	64.86	62.08
VIT_08s0007g01020.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	72.84	61.96
TraesCS7A01G241400.1	Wheat	cytosol	63.58	61.61
KRH49170	Soybean	cytosol	57.19	59.87
HORVU1Hr1G072680.1	Barley	cytosol, peroxisome	50.48	59.85
Os05t0456200-00	Rice	cytosol	46.01	59.5
TraesCS1D01G022400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	63.26	58.75
Zm00001d042868_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	46.33	58.0
HORVU3Hr1G007410.5	Barley	plastid	68.05	57.41
TraesCS1B01G027700.2	Wheat	cytosol, peroxisome, plastid	63.9	56.98
KXG22145	Sorghum	plastid	66.77	56.49
HORVU1Hr1G072700.20	Barley	plastid	65.81	53.37
TraesCS1A01G282300.2	Wheat	mitochondrion	54.63	52.78
Zm00001d038365_P002	Maize	mitochondrion	60.06	52.37
KRH09512	Soybean	cytosol	45.69	44.69
KRH09515	Soybean	cytosol	45.69	44.41
KRH38981	Soybean	cytosol	43.77	44.05
KRH00349	Soybean	cytosol	44.41	43.3
KRH40836	Soybean	cytosol	43.77	42.55
KRH38984	Soybean	cytosol	42.49	41.82
KRH01577	Soybean	endoplasmic reticulum, nucleus	41.53	41.27
KRH23850	Soybean	mitochondrion	40.89	40.63
KRH39940	Soybean	mitochondrion	40.89	40.63
KRH12716	Soybean	plastid	40.89	40.63
KRG89550	Soybean	cytosol	41.53	40.5
KRH09516	Soybean	cytosol	35.78	40.0
KRH74034	Soybean	endoplasmic reticulum, mitochondrion, nucleus	40.26	40.0
KRH14079	Soybean	cytosol	36.74	38.21
KRH24361	Soybean	endoplasmic reticulum, nucleus	37.38	37.86
KRH71973	Soybean	cytoskeleton, cytosol, peroxisome	35.14	33.85

Protein Annotations

EntrezGene:100801791	Gene3D:3.20.20.100	MapMan:50.1.1	EMBL:ACUP02000450	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase
EnsemblPlantsGene:GLYMA_01G102600	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	UniProt:I1J6Z7	InterPro:IPR036812	EnsemblPlants:KRH75702	ProteinID:KRH75702	ProteinID:KRH75702.1
InterPro:NADP_OxRdtase_dom	InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062
ScanProsite:PS00063	ScanProsite:PS00798	PANTHER:PTHR11732	PANTHER:PTHR11732:SF386	SUPFAM:SSF51430	UniParc:UPI00001511A5
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:34164743..34168253

Molecular Weight (calculated)

34876.8 Da

IEP (calculated)

6.635

GRAVY (calculated)

-0.248

Length

313 amino acids

Sequence
(BLAST)

001: MAKLIKFFEL NTGAKIPSVG LGTWQAEPGV VAKAVTTAIL VGYRHIDCAQ AYNNQAEIGS ALKKLFDDGV VKREDLWITS KLWCSDHASE DVPKALDKTL
101: QDLQLDYLDL YLIHWPVRMK SGSVGFKKEY LDQPDIPSTW KAMEALYDSG KARAIGVSNF SSKKLQDLMN IARVPPAVNQ VELHPGWQQP KLHAFCESKG
201: VHLSGYSPLG SPGVLKSDIL KNPVVIEIAE KLGKTPAQVA LRWGLQTGHS VLPKSTNESR IKGNFDVFDW SIPEEVMDKF SEIKQDRLIK GTFFVDETYG
301: AFKTVEELWD GEL

Best Arabidopsis Sequence Match ( AT2G37760.1 )
(BLAST)

001: MAAPIRFFEL NTGAKLPCVG LGTYAMVATA IEQAIKIGYR HIDCASIYGN EKEIGGVLKK LIGDGFVKRE ELFITSKLWS NDHLPEDVPK ALEKTLQDLQ
101: IDYVDLYLIH WPASLKKESL MPTPEMLTKP DITSTWKAME ALYDSGKARA IGVSNFSSKK LTDLLNVARV TPAVNQVECH PVWQQQGLHE LCKSKGVHLS
201: GYSPLGSQSK GEVRLKVLQN PIVTEVAEKL GKTTAQVALR WGLQTGHSVL PKSSSGARLK ENLDVFDWSI PEDLFTKFSN IPQEKFCRAT EFAHETHGFY
301: KTIEELWDGE I

Arabidopsis Description

AKR4C8Aldo-keto reductase family 4 member C8 [Source:UniProtKB/Swiss-Prot;Acc:O80944]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.