CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 4
peroxisome 1
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 25806999

msms PMID: 25806999 doi

AH Kamal, S Komatsu

National Institute of Crop Science, National Agriculture and Food Research Organization, Kannondai 2-1-18, Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g01040.t01	Wine grape	cytosol	75.35	74.83
KRH65915	Soybean	cytosol	77.43	70.79
KRH75705	Soybean	cytosol	76.74	70.16
VIT_08s0007g01030.t01	Wine grape	cytosol	74.65	69.13
AT2G37770.2	Thale cress	cytosol, peroxisome, plastid	74.31	67.94
Bra005162.1-P	Field mustard	cytosol, peroxisome, plastid	72.22	67.1
Bra000018.1-P	Field mustard	cytosol, peroxisome, plastid	73.26	66.98
CDY07771	Canola	cytosol, peroxisome, plastid	73.26	66.98
CDY64988	Canola	cytosol, peroxisome, plastid	73.26	66.98
KRH75702	Soybean	nucleus	72.57	66.77
AT2G37790.1	Thale cress	cytosol	72.57	66.56
KRH65857	Soybean	nucleus	71.88	66.13
CDY59481	Canola	cytosol, peroxisome, plastid	72.22	66.03
Bra005161.1-P	Field mustard	cytosol	71.53	65.81
Bra000019.1-P	Field mustard	cytosol, peroxisome, plastid	71.88	65.71
CDX73517	Canola	cytosol	70.14	64.95
CDY57141	Canola	cytosol	72.57	64.91
KRH65858	Soybean	nucleus	70.49	64.86
Bra005159.1-P	Field mustard	cytosol	70.83	64.76
Bra007032.1-P	Field mustard	cytosol	69.79	64.63
CDY54027	Canola	cytosol	69.79	64.63
CDX74934	Canola	cytosol	70.49	64.44
CDX74935	Canola	cytosol, nucleus, peroxisome	57.64	64.09
AT3G53880.1	Thale cress	cytosol	69.79	63.81
CDY07770	Canola	cytosol	67.36	63.4
Os01t0847700-01	Rice	plasma membrane	68.06	63.02
TraesCS3B01G045400.1	Wheat	cytosol	67.71	62.9
TraesCS3D01G041300.1	Wheat	cytosol, mitochondrion, plastid	67.71	62.9
TraesCS3A01G038400.1	Wheat	cytosol, mitochondrion, plastid	67.36	62.58
EES01753	Sorghum	cytosol, mitochondrion, plastid	67.01	62.26
Os01t0847600-01	Rice	cytosol	67.01	62.06
TraesCS3B01G395600.1	Wheat	golgi	67.01	62.06
Zm00001d042869_P001	Maize	extracellular	66.67	61.94
HORVU3Hr1G085800.1	Barley	cytosol	7.29	61.76
KRH75700	Soybean	cytosol, nucleus, peroxisome	49.31	61.74
TraesCS3A01G363400.1	Wheat	cytosol, peroxisome, plastid	66.67	61.74
TraesCS1A01G281900.1	Wheat	cytosol	44.1	61.65
KRH65854	Soybean	cytosol	66.67	61.34
TraesCS1D01G281800.1	Wheat	unclear	65.62	61.16
TraesCS1A01G282400.1	Wheat	cytosol	64.24	61.06
CDY57143	Canola	endoplasmic reticulum	53.82	61.02
TraesCS1A01G282600.1	Wheat	unclear	65.28	60.84
TraesCS1B01G291500.1	Wheat	cytosol	65.28	60.84
EES01752	Sorghum	cytosol	65.62	60.77
TraesCS3D01G356900.1	Wheat	cytosol	65.62	60.77
CDY59483	Canola	cytosol	53.12	60.47
TraesCS1D01G021100.1	Wheat	mitochondrion	64.93	60.32
TraesCS1B01G025100.2	Wheat	cytosol	64.93	60.13
TraesCS1B01G026600.2	Wheat	mitochondrion	64.58	60.0
Zm00001d010054_P001	Maize	extracellular	64.93	59.94
TraesCS1A01G282000.1	Wheat	cytosol	64.93	59.74
TraesCS1B01G291400.1	Wheat	plastid	64.93	59.74
TraesCS1D01G281500.1	Wheat	cytosol, peroxisome, plastid	64.93	59.74
TraesCS1D01G281700.1	Wheat	cytosol, peroxisome, plastid	62.85	59.74
TraesCS1B01G027200.1	Wheat	mitochondrion	64.24	59.68
TraesCS1D01G281300.1	Wheat	cytosol	64.24	59.68
EES19639	Sorghum	cytosol, peroxisome, plastid	64.58	59.62
TraesCS1B01G291200.1	Wheat	cytosol	64.58	59.42
Os01t0847800-02	Rice	cytosol, peroxisome, plastid	62.5	59.21
KXG22143	Sorghum	extracellular	63.89	59.16
EES01754	Sorghum	plastid	62.15	58.88
TraesCS7D01G240400.1	Wheat	plastid	62.15	58.88
TraesCS1D01G281600.1	Wheat	cytosol	65.28	58.57
TraesCS3A01G363500.1	Wheat	plastid	61.81	58.36
TraesCS3D01G357000.1	Wheat	plastid	61.81	58.36
PGSC0003DMT400022952	Potato	cytosol	64.24	58.36
Os05t0456300-01	Rice	cytosol, mitochondrion, peroxisome, plastid	65.97	58.28
HORVU1Hr1G072670.1	Barley	cytosol	62.85	58.2
TraesCS1D01G281200.1	Wheat	cytosol	62.85	58.2
Solyc09g011240.2.1	Tomato	extracellular, unclear	63.89	58.04
HORVU1Hr1G072680.1	Barley	cytosol, peroxisome	53.12	57.95
TraesCS1B01G291100.1	Wheat	cytosol	62.5	57.88
TraesCS3B01G395700.1	Wheat	plastid	61.11	57.7
PGSC0003DMT400022949	Potato	cytosol, peroxisome, plastid	63.54	56.83
HORVU1Hr1G072690.2	Barley	plastid	42.36	56.74
Os05t0456200-00	Rice	cytosol	47.57	56.61
GSMUA_Achr5P28750_001	Banana	golgi, mitochondrion, peroxisome, plastid	67.71	56.03
KRH00045	Soybean	cytosol	61.11	55.35
TraesCS7B01G136900.1	Wheat	plastid	58.33	55.26
TraesCS1A01G282200.1	Wheat	cytosol	37.85	55.05
TraesCS1D01G022400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	63.89	54.6
KRH49170	Soybean	cytosol	56.6	54.52
TraesCS7A01G241400.1	Wheat	cytosol	61.11	54.49
TraesCS1A01G021900.1	Wheat	cytosol	29.51	54.49
TraesCS1B01G028300.1	Wheat	cytosol	32.29	54.07
HORVU3Hr1G085780.14	Barley	cytosol, mitochondrion, peroxisome	61.11	53.82
TraesCS1B01G027700.2	Wheat	cytosol, peroxisome, plastid	64.24	52.71
HORVU3Hr1G007410.5	Barley	plastid	67.71	52.56
Zm00001d042868_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	45.49	52.4
TraesCS1A01G282300.2	Wheat	mitochondrion	56.25	50.0
HORVU1Hr1G072700.20	Barley	plastid	65.97	49.22
KXG22145	Sorghum	plastid	63.19	49.19
Zm00001d038365_P002	Maize	mitochondrion	56.94	45.68
KRH09512	Soybean	cytosol	45.49	40.94
KRH38981	Soybean	cytosol	43.06	39.87
KRH09515	Soybean	cytosol	44.44	39.75
KRH38984	Soybean	cytosol	43.4	39.31
KRG89550	Soybean	cytosol	43.4	38.94
KRH01577	Soybean	endoplasmic reticulum, nucleus	42.36	38.73
KRH23850	Soybean	mitochondrion	42.01	38.41
KRH00349	Soybean	cytosol	42.71	38.32
KRH40836	Soybean	cytosol	42.71	38.2
KRH12716	Soybean	plastid	41.32	37.78
KRH39940	Soybean	mitochondrion	41.32	37.78
KRH09516	Soybean	cytosol	36.11	37.14
KRH74034	Soybean	endoplasmic reticulum, mitochondrion, nucleus	39.58	36.19
KRH24361	Soybean	endoplasmic reticulum, nucleus	38.54	35.92
KRH14079	Soybean	cytosol	37.15	35.55
CDY57148	Canola	cytosol, peroxisome, plastid	71.88	34.5
KRH71973	Soybean	cytoskeleton, cytosol, peroxisome	35.07	31.08

Protein Annotations

Gene3D:3.20.20.100	MapMan:50.1.1	EMBL:ACUP02011365	InterPro:Aldo/ket_reductase_CS	InterPro:Aldo/keto_reductase	EnsemblPlantsGene:GLYMA_18G187600
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:IPR036812	UniProt:K7MT91	EnsemblPlants:KRH00040	ProteinID:KRH00040	ProteinID:KRH00040.1	InterPro:NADP_OxRdtase_dom
InterPro:NADP_OxRdtase_dom_sf	PFAM:PF00248	PIRSF:PIRSF000097	PRINTS:PR00069	ScanProsite:PS00062	ScanProsite:PS00063
ScanProsite:PS00798	PANTHER:PTHR11732	PANTHER:PTHR11732:SF386	SUPFAM:SSF51430	UniParc:UPI00029694E2	SEG:seg

Description

hypothetical protein

Coordinates

chr18:+:45123381..45129775

Molecular Weight (calculated)

32357.9 Da

IEP (calculated)

6.719

GRAVY (calculated)

-0.245

Length

288 amino acids

Sequence
(BLAST)

001: MSNEIRFFEL NTGANIPSLG LGTWLADPGV VGDVIAHAVE VGYRHIDCAQ IYGNQEEIGL ALKKLFEEGV VKREDLWITS KLWCTDHAPE DVPEALDRTL
101: RDLQLDYIDL YLIHWPIRMK KGSVGFKAEN IVPSDIPNTW KAMEALNKSG KARAIGVSNF STKKLGELLE YARVTPAVNQ SECHPAWRQD KLKAFCKSKG
201: VHFSGYSPLG SPAWLEGDFL NHPVINMIAK KLGKTPAQVA LRWGLQMGHS VLPKSSNPAR IKENFDIFDW SIPEDMLDKF FEIQQVNI

Best Arabidopsis Sequence Match ( AT2G37770.2 )
(BLAST)

001: MANAITFFKL NTGAKFPSVG LGTWQASPGL VGDAVAAAVK IGYRHIDCAQ IYGNEKEIGA VLKKLFEDRV VKREDLFITS KLWCTDHDPQ DVPEALNRTL
101: KDLQLEYVDL YLIHWPARIK KGSVGIKPEN LLPVDIPSTW KAMEALYDSG KARAIGVSNF STKKLADLLE LARVPPAVNQ VECHPSWRQT KLQEFCKSKG
201: VHLSAYSPLG SPGTTWLKSD VLKNPILNMV AEKLGKSPAQ VALRWGLQMG HSVLPKSTNE GRIKENFNVF DWSIPDYMFA KFAEIEQARL VTGSFLVHET
301: LSPYKSIEEL WDGEI

Arabidopsis Description

AKR4C9NADPH-dependent aldo-keto reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0PGJ6]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.