Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P05400_001 | Banana | nucleus, plastid | 55.6 | 54.61 |
| GSMUA_Achr4P20300_001 | Banana | nucleus, plastid | 56.32 | 54.17 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.77 | 33.33 |
| GSMUA_Achr5P28620_001 | Banana | cytosol | 32.85 | 33.21 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P06060_001 | EnsemblPlants:GSMUA_Achr4T06060_001 | EnsemblPlantsGene:GSMUA_Achr4G06060_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:CUE | InterPro:IPR003892 | InterPro:UBA-like_sf | PANTHER:PTHR31245 | PANTHER:PTHR31245:SF7 | PFscan:PS51140 |
| SUPFAM:SSF46934 | UniParc:UPI000294AB1F | UniProt:M0SLH3 | MapMan:35.2 | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G06060_001]
Coordinates
chr4:+:4625275..4627667
Molecular Weight (calculated)
30897.0 Da
IEP (calculated)
7.390
GRAVY (calculated)
-0.461
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MSALVCGKRS SSIFEELAHT PPPSVSKRAR CCFAGAASPT TPALHIHQVA AHIAHLRFLF PEMDPQLLQR ALEESGHDLA SAVKCLNALR LESTEINLMS
101: AQSKTEAVLE TKPQVSAEGI TNDCKDATAP IQPAEEHPPR DNSEWVDLFV RGMMNASDMN DARSRASQML GVLEKSITAR AGAEAMKSLH KENTTMKEKT
201: RVLLGENNLL KRAVAMQHDR QKNYDEICRE SQHLNQLVSQ YQELLRTLEV NNFALKMHLK EAQHSRSIPG RFHPDIF
101: AQSKTEAVLE TKPQVSAEGI TNDCKDATAP IQPAEEHPPR DNSEWVDLFV RGMMNASDMN DARSRASQML GVLEKSITAR AGAEAMKSLH KENTTMKEKT
201: RVLLGENNLL KRAVAMQHDR QKNYDEICRE SQHLNQLVSQ YQELLRTLEV NNFALKMHLK EAQHSRSIPG RFHPDIF
001: MSAIVCGKRS LFEDLAAASP PVSKKLRCFS SSSSSRFSPP IPPSSSLLLD HLAAIFPDMD KQILERAIEE CGDDLDSAIR CLNQLRLESA NKNSDSATNQ
101: SPVVIQEPNV EPQQQGRSAK EEPNVLNLDG TEWVELFVRE MMNASDMKDA KARAARALEA LEKSINARTG TDAMQNLQQE NMMLKQQLEA IVQENSLLKR
201: AVVTQQKRQR ESEDQSQELQ HLRQLVTQYQ EQLRTLEVNN YALTLHLKQA QQNSSIPGRY HPDVF
101: SPVVIQEPNV EPQQQGRSAK EEPNVLNLDG TEWVELFVRE MMNASDMKDA KARAARALEA LEKSINARTG TDAMQNLQQE NMMLKQQLEA IVQENSLLKR
201: AVVTQQKRQR ESEDQSQELQ HLRQLVTQYQ EQLRTLEVNN YALTLHLKQA QQNSSIPGRY HPDVF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:F4KED5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.