Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 68.98 | 71.59 |
| VIT_08s0007g00080.t01 | Wine grape | nucleus, plastid | 52.55 | 52.55 |
| GSMUA_Achr4P20300_001 | Banana | nucleus, plastid | 36.86 | 35.07 |
| GSMUA_Achr7P05400_001 | Banana | nucleus, plastid | 35.04 | 34.04 |
| AT5G02510.2 | Thale cress | plastid | 31.39 | 33.99 |
| GSMUA_Achr4P06060_001 | Banana | cytosol, plastid | 33.21 | 32.85 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P28620_001 | EnsemblPlants:GSMUA_Achr5T28620_001 | EnsemblPlantsGene:GSMUA_Achr5G28620_001 | Gene3D:1.10.8.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:UBA-like_sf | PANTHER:PTHR31245 | PANTHER:PTHR31245:SF6 | SUPFAM:SSF46934 | UniParc:UPI0002960186 |
| UniProt:M0T2I6 | MapMan:35.2 | : | : | : | : |
Description
Putative CUE domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G28620_001]
Coordinates
chr5:-:28719581..28723367
Molecular Weight (calculated)
30239.0 Da
IEP (calculated)
5.798
GRAVY (calculated)
-0.424
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAGICGKRL GLEEIFGSPL PPPPSAKRSR CARYGSPVRH SNSDFGLGSE DKLSILLRMF PAMDRKVVET VLNTQDHKID DAIKSLHALC LGDGSLSTEG
101: VISDLQSNDS VLEGVMNSQT SGKKVEVSEN DGADLQSGEA GKGTSWVDIF VKEMMNASDL GDVRGRAMKI LEAFEGDVVA QTTAVVENES NLLKEQLHCL
201: VRDNQILKRA VAIQHERNSE NEEKIREVQH LKHAICQYQE QVRALEMHNY TLKIHLQKAQ EANSIPGCFH PDMF
101: VISDLQSNDS VLEGVMNSQT SGKKVEVSEN DGADLQSGEA GKGTSWVDIF VKEMMNASDL GDVRGRAMKI LEAFEGDVVA QTTAVVENES NLLKEQLHCL
201: VRDNQILKRA VAIQHERNSE NEEKIREVQH LKHAICQYQE QVRALEMHNY TLKIHLQKAQ EANSIPGCFH PDMF
001: MSAIVCGKRS LFEDLAAASP PVSKKLRCFS SSSSSRFSPP IPPSSSLLLD HLAAIFPDMD KQILERAIEE CGDDLDSAIR CLNQLRLESA NKNSDSATNQ
101: SPVVIQEPNV EPQQQGRSAK EEPNVLNLDG TEWVELFVRE MMNASDMKDA KARAARALEA LEKSINARTG TDAMQNLQQE NMMLKQQLEA IVQENSLLKR
201: AVVTQQKRQR ESEDQSQELQ HLRQLVTQYQ EQLRTLEVNN YALTLHLKQA QQNSSIPGRY HPDVF
101: SPVVIQEPNV EPQQQGRSAK EEPNVLNLDG TEWVELFVRE MMNASDMKDA KARAARALEA LEKSINARTG TDAMQNLQQE NMMLKQQLEA IVQENSLLKR
201: AVVTQQKRQR ESEDQSQELQ HLRQLVTQYQ EQLRTLEVNN YALTLHLKQA QQNSSIPGRY HPDVF
Arabidopsis Description
Ubiquitin system component Cue protein [Source:UniProtKB/TrEMBL;Acc:F4KED5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.