Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0007g00080.t01 | Wine grape | nucleus, plastid | 42.29 | 39.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.81 | 31.44 |
| GSMUA_Achr5P28620_001 | Banana | cytosol | 33.99 | 31.39 |
| AT1G80040.1 | Thale cress | nucleus, plastid | 26.09 | 26.61 |
| AT5G32440.3 | Thale cress | plastid | 26.88 | 25.66 |
Protein Annotations
| ArrayExpress:AT5G02510 | EnsemblPlants:AT5G02510.2 | EnsemblPlantsGene:AT5G02510 | EntrezGene:831869 | PANTHER:PTHR31245 | PANTHER:PTHR31245:SF6 |
| ProteinID:ANM70980.1 | RefSeq:AT5G02510 | RefSeq:AT5G02510-TAIR-G | RefSeq:NP_001332545.1 | TAIR:AT5G02510 | Unigene:At.54688 |
| UniParc:UPI00084934C4 | UniProt:A0A1P8BHA2 | MapMan:35.2 | : | : | : |
Description
BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1); Has 166 Blast hits to 166 proteins in 31 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - /.../urce: NCBI BLink). [Source:TAIR;Acc:AT5G02510]
Coordinates
chr5:+:559413..560860
Molecular Weight (calculated)
28718.8 Da
IEP (calculated)
6.686
GRAVY (calculated)
-0.537
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MFNCSSLSLP FFFTAIARRC RFLSSSSSPT NKRTKWSSFG SPIRSSETGS GSDDPVASLI HVFPTMDPEF VREVMSNKNY VFEEAKESLS SILFNGDSDR
101: TEAGFFDGSV ESWNDEDMID GAKWVDRLVS EMTKAINIDD MRRRVAVILE ALESIIKKNT NASKKLEYAS MKESLQSLIN DNQILKRVIA NQHQRSSENE
201: EKAKQVLHLR GVVGQYQEQV HKLELSNYAM KLHLQRSQQQ QTSFSGNLPP DIY
101: TEAGFFDGSV ESWNDEDMID GAKWVDRLVS EMTKAINIDD MRRRVAVILE ALESIIKKNT NASKKLEYAS MKESLQSLIN DNQILKRVIA NQHQRSSENE
201: EKAKQVLHLR GVVGQYQEQV HKLELSNYAM KLHLQRSQQQ QTSFSGNLPP DIY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.