Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P32700_001 | Banana | cytosol | 26.61 | 61.11 |
| GSMUA_Achr8P32690_001 | Banana | cytosol, mitochondrion | 6.45 | 3.92 |
| GSMUA_Achr9P00290_001 | Banana | plastid | 3.23 | 1.58 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P00280_001 | EnsemblPlants:GSMUA_Achr9T00280_001 | EnsemblPlantsGene:GSMUA_Achr9G00280_001 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006810 | GO:GO:0008150 | InterPro:FeS-cluster_ATPase_SufC | InterPro:P-loop_NTPase |
| PANTHER:PTHR43204 | PANTHER:PTHR43204:SF1 | SignalP:SignalP-noTM | SUPFAM:SSF52540 | UniParc:UPI00029531DA | UniProt:M0TW85 |
| MapMan:35.1 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G00280_001]
Coordinates
chr9:-:288690..292366
Molecular Weight (calculated)
13503.4 Da
IEP (calculated)
4.195
GRAVY (calculated)
0.414
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTSIAFIFV GLASIAFDAT IDGDLCLLRP HCTITSHVLE ADLAILDEID SGLDVDALQD VAKAVNGLLT PNNSVLIITH YQRLLECIKP SYVHIMEDGM
101: IVRTGDVSLA EQLEREGYRG ISMS
101: IVRTGDVSLA EQLEREGYRG ISMS
001: MAGVNLQLRH AYSIAQFVPT VSSPPPLPTQ RVRLGTSPSR VLLCNLRANS AAAPILRTTR RSVIVSASSV SSAVDSDSLV EDRDDVGRIP LLEVRDLRAV
101: IAESRQEILK GVNLVVYEGE VHAVMGKNGS GKSTFSKVLV GHPDYEVTGG SIVFKGQNLL DMEPEDRSLA GLFMSFQSPV EIPGVSNMDF LNMAFNARKR
201: KLGQPELDPI QFYSHLVSKL EVVNMKTDFL NRNVNEGFSG GERKRNEILQ LAVLGAELAI LDEIDSGLDV DALQDVAKAV NGLLTPKNSV LMITHYQRLL
301: DYIKPTLIHI MENGRIIKTG DNSLAKLLEK EGYKAISG
101: IAESRQEILK GVNLVVYEGE VHAVMGKNGS GKSTFSKVLV GHPDYEVTGG SIVFKGQNLL DMEPEDRSLA GLFMSFQSPV EIPGVSNMDF LNMAFNARKR
201: KLGQPELDPI QFYSHLVSKL EVVNMKTDFL NRNVNEGFSG GERKRNEILQ LAVLGAELAI LDEIDSGLDV DALQDVAKAV NGLLTPKNSV LMITHYQRLL
301: DYIKPTLIHI MENGRIIKTG DNSLAKLLEK EGYKAISG
Arabidopsis Description
ABCI6ABC transporter I family member 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CAF5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.