Factsheet for GSMUA_Achr9P02870_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g063480.2.1	Tomato	cytosol, nucleus, plasma membrane	33.54	70.72
Bra029027.1-P	Field mustard	cytosol	56.94	57.84
CDY43041	Canola	cytosol	53.67	57.14
PGSC0003DMT400090495	Potato	plasma membrane	71.92	55.21
PGSC0003DMT400049559	Potato	plasma membrane	71.92	55.21
VIT_19s0014g03400.t01	Wine grape	plasma membrane	71.76	54.96
PGSC0003DMT400064427	Potato	plasma membrane	70.98	54.56
KRH26047	Soybean	endoplasmic reticulum	71.61	54.26
Solyc10g006870.1.1	Tomato	plasma membrane	70.67	53.93
CDY63832	Canola	plasma membrane	69.73	52.4
Bra002993.1-P	Field mustard	plasma membrane	69.89	52.28
AT5G54380.1	Thale cress	plasma membrane	69.58	52.16
GSMUA_Achr11P...	Banana	cytosol	47.11	51.36
CDY67402	Canola	plasma membrane	58.19	51.03
CDY43828	Canola	plasma membrane	63.65	50.87
KRH27185	Soybean	plasma membrane	54.29	50.51
GSMUA_Achr9P04140_001	Banana	plasma membrane	44.77	50.26
GSMUA_Achr5P28470_001	Banana	plasma membrane	33.07	45.4
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	30.89	43.81
GSMUA_Achr9P04860_001	Banana	vacuole	43.37	39.04
GSMUA_Achr4P32700_001	Banana	plasma membrane	40.41	37.27
GSMUA_Achr7P20760_001	Banana	plasma membrane	39.94	36.94
GSMUA_Achr11P...	Banana	plasma membrane	39.47	36.3
GSMUA_Achr11P...	Banana	plasma membrane	42.28	35.75
GSMUA_Achr8P01710_001	Banana	plasma membrane	49.3	35.55
GSMUA_Achr4P09870_001	Banana	plasma membrane	36.51	35.45
GSMUA_Achr8P12240_001	Banana	vacuole	34.63	34.85
GSMUA_AchrUn_...	Banana	plasma membrane, vacuole	36.82	33.24
GSMUA_Achr3P09730_001	Banana	plasma membrane, vacuole	36.04	31.77
GSMUA_Achr11P...	Banana	plasma membrane	33.39	31.42
GSMUA_Achr11P...	Banana	plasma membrane	34.48	30.52
GSMUA_Achr8P21410_001	Banana	cytosol	38.69	26.5

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009506
GO:GO:0009605	GO:GO:0009607	GO:GO:0009817	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0046777	EnsemblPlantsGene:GSMUA_Achr9G02870_001	EnsemblPlants:GSMUA_Achr9P02870_001	EnsemblPlants:GSMUA_Achr9T02870_001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0TWZ6	InterPro:Malectin-like_Carb-bd_dom	PFAM:PF07714	PFAM:PF12819
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF41	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000294F240	SEG:seg	:	:	:

Description

Putative Receptor-like protein kinase HERK 1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G02870_001]

Coordinates

chr9:-:2017955..2021535

Molecular Weight (calculated)

70326.6 Da

IEP (calculated)

4.692

GRAVY (calculated)

-0.104

Length

641 amino acids

Sequence
(BLAST)

001: MLRRICLGLS IACLALILVD GSFAAFTPAD NYLLACGSSQ NVSVQGQNSN RTYLFKEYSV NVTSDCLALT FIPSHGSVSF VNGIEVVSVP DELIYDQALA
101: VPNAPFSGLS VLGLETMYRL NMGGPLLTPQ HDSLGRTWEN DAKYLHVNSS AVKASADLAT ITYPDGITIE TAPRLVYSTA ETMGDANVTD LNFNITWVFS
201: VDPSFLYLIR FHFLPYYKDF VSNSSDGSNT MTVSVGPDVV ADFSNAILNG LEIMKISNGA KSLDGVYAVK DLLPESPPGR NNKVSTTSQK SGTASCISLA
301: STNLGRVFMF QEILDATNKF DENLVLGVGG FGKVYEGTLE DGTKVAIKRG NPRSEQGLAE FQTEIEMLSK LRHRHLVSLI GYCDERSEMI LVYEYMANGP
401: LRSHLYAQSI IHRDVKTTNI LLDENFVAKV ADFGLSKTGP ALDQTHVSTA VKGSFGYLDP EYFRRQQLTE KSDVYSFGVV LLEVLCARPA LNPVLPREQV
501: NIAEWAMNWQ KKGMLERIVD PALTGKINAT SLRKYGDTAE KCLAEQGVDR PTMGDVLWNL EYALQLEETS SLDDPYENSI RSISGIVLPH MEPLDNSISV
601: VEGANTGSEN DAEDATTSAV FSQIQKKNMR EEKISGRIQI W

Best Arabidopsis Sequence Match ( AT5G54380.1 )
(BLAST)

001: MVFTKSLLVL LWFLSCYTTT TSSALFNPPD NYLISCGSSQ NITFQNRIFV PDSLHSSLVL KIGNSSVATS TTSNNSTNSI YQTARVFSSL ASYRFKITSL
101: GRHWIRLHFS PINNSTWNLT SASITVVTED FVLLNNFSFN NFNGSYIFKE YTVNVTSEFL TLSFIPSNNS VVFVNAIEVV SVPDNLIPDQ ALALNPSTPF
201: SGLSLLAFET VYRLNMGGPL LTSQNDTLGR QWDNDAEYLH VNSSVLVVTA NPSSIKYSPS VTQETAPNMV YATADTMGDA NVASPSFNVT WVLPVDPDFR
301: YFVRVHFCDI VSQALNTLVF NLYVNDDLAL GSLDLSTLTN GLKVPYFKDF ISNGSVESSG VLTVSVGPDS QADITNATMN GLEVLKISNE AKSLSGVSSV
401: KSLLPGGSGS KSKKKAVIIG SLVGAVTLIL LIAVCCYCCL VASRKQRSTS PQEGGNGHPW LPLPLYGLSQ TLTKSTASHK SATASCISLA STHLGRCFMF
501: QEIMDATNKF DESSLLGVGG FGRVYKGTLE DGTKVAVKRG NPRSEQGMAE FRTEIEMLSK LRHRHLVSLI GYCDERSEMI LVYEYMANGP LRSHLYGADL
601: PPLSWKQRLE ICIGAARGLH YLHTGASQSI IHRDVKTTNI LLDENLVAKV ADFGLSKTGP SLDQTHVSTA VKGSFGYLDP EYFRRQQLTE KSDVYSFGVV
701: LMEVLCCRPA LNPVLPREQV NIAEWAMAWQ KKGLLDQIMD SNLTGKVNPA SLKKFGETAE KCLAEYGVDR PSMGDVLWNL EYALQLEETS SALMEPDDNS
801: TNHIPGIPMA PMEPFDNSMS IIDRGGVNSG TGTDDDAEDA TTSAVFSQLV HPRGR

Arabidopsis Description

THE1Receptor-like protein kinase THESEUS 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK35]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.