Factsheet for GSMUA_Achr5P28470_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
cytosol 1
extracellular 5
golgi 4
plasma membrane 6
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P04140_001	Banana	plasma membrane	74.09	60.6
GSMUA_Achr11P...	Banana	cytosol	69.16	54.93
Solyc06g005230.1.1	Tomato	plastid	28.91	36.1
CDY49572	Canola	cytosol	22.27	35.49
PGSC0003DMT400043793	Potato	cytosol, plastid	23.98	34.67
Solyc05g013300.1.1	Tomato	cytosol	23.34	33.75
GSMUA_Achr9P02870_001	Banana	plasma membrane	45.4	33.07
KRH24985	Soybean	plasma membrane	57.17	31.9
Bra033826.1-P	Field mustard	cytosol, plasma membrane, plastid	49.04	31.72
EES17770	Sorghum	plasma membrane	55.89	31.26
Zm00001d037544_P001	Maize	plasma membrane	55.67	31.1
KRG88684	Soybean	plasma membrane	53.1	30.58
HORVU1Hr1G024070.1	Barley	plasma membrane	55.03	30.56
CDX99115	Canola	plasma membrane	53.1	30.36
PGSC0003DMT400043784	Potato	cytosol	23.34	30.19
TraesCS1B01G130300.2	Wheat	plasma membrane	54.6	30.18
Solyc11g072910.1.1	Tomato	plasma membrane	53.75	30.1
CDX68370	Canola	plasma membrane	52.68	30.0
TraesCS1A01G108100.1	Wheat	plasma membrane	54.18	29.98
CDX86076	Canola	plasma membrane	52.46	29.95
PGSC0003DMT400040185	Potato	plasma membrane	53.32	29.86
PGSC0003DMT400035099	Potato	cytosol	24.2	29.82
AT5G59700.1	Thale cress	plasma membrane	52.89	29.79
Bra018214.1-P	Field mustard	plasma membrane	53.1	29.77
AT3G46290.1	Thale cress	plasma membrane	52.89	29.76
CDX82981	Canola	plasma membrane	53.1	29.74
PGSC0003DMT400025093	Potato	plasma membrane	52.68	29.67
CDX80236	Canola	plasma membrane	51.18	29.58
VIT_06s0004g03920.t01	Wine grape	plasma membrane	51.61	29.43
Os03t0281500-01	Rice	plasma membrane	52.68	29.32
KRH10340	Soybean	plasma membrane	46.25	29.15
Bra002541.1-P	Field mustard	plasma membrane	51.18	28.83
TraesCS4B01G201600.1	Wheat	plasma membrane	51.18	28.18
TraesCS1D01G110900.1	Wheat	plasma membrane	47.97	27.96
Zm00001d028686_P001	Maize	plasma membrane	50.75	27.85
TraesCS4A01G102900.1	Wheat	plasma membrane	50.54	27.8
TraesCS4D01G202300.1	Wheat	plasma membrane	50.32	27.68
HORVU4Hr1G058220.1	Barley	plasma membrane	49.89	27.64
VIT_13s0067g03780.t01	Wine grape	plasma membrane	48.18	27.21
EER95065	Sorghum	plasma membrane	50.54	27.03
Solyc05g054860.1.1	Tomato	plasma membrane	46.9	27.0
PGSC0003DMT400060442	Potato	plasma membrane	47.11	26.89
AT2G39360.1	Thale cress	plasma membrane	41.97	24.05
CDY24966	Canola	plasma membrane	41.76	23.87
Bra000130.1-P	Field mustard	plasma membrane	41.76	23.84
CDY07654	Canola	plasma membrane	41.76	23.81
GSMUA_Achr7P20760_001	Banana	plasma membrane	34.48	23.23
KXG31830	Sorghum	plasma membrane	43.25	23.14
Os01t0155500-01	Rice	plasma membrane	45.4	22.65
GSMUA_Achr4P32700_001	Banana	plasma membrane	33.4	22.45
HORVU3Hr1G086590.1	Barley	plasma membrane	43.04	22.23
GSMUA_Achr8P12240_001	Banana	vacuole	29.98	21.98
TraesCS3D01G134400.1	Wheat	plasma membrane	42.4	21.95
TraesCS3A01G308100.1	Wheat	mitochondrion, plasma membrane	42.61	21.92
GSMUA_Achr9P04860_001	Banana	vacuole	33.4	21.91
TraesCS3B01G151200.1	Wheat	mitochondrion, plasma membrane	42.4	21.78
GSMUA_Achr11P...	Banana	plasma membrane	34.9	21.5
HORVU3Hr1G024950.4	Barley	plasma membrane	43.04	21.34
GSMUA_Achr11P...	Banana	plasma membrane	31.05	21.29
GSMUA_Achr11P...	Banana	plasma membrane	31.48	21.09
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	20.34	21.02
GSMUA_Achr4P09870_001	Banana	plasma membrane	29.55	20.91
GSMUA_AchrUn_...	Banana	plasma membrane, vacuole	31.48	20.7
GSMUA_Achr8P01710_001	Banana	plasma membrane	38.97	20.47
GSMUA_Achr11P...	Banana	plasma membrane	31.48	20.3
GSMUA_Achr3P09730_001	Banana	plasma membrane, vacuole	27.19	17.47
GSMUA_Achr8P21410_001	Banana	cytosol	33.19	16.56

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004713
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0018108	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr5G28470_001	EnsemblPlants:GSMUA_Achr5P28470_001	EnsemblPlants:GSMUA_Achr5T28470_001	InterPro:Kinase-like_dom_sf	UniProt:M0T2H1	InterPro:Malectin-like_Carb-bd_dom
PFAM:PF12819	PANTHER:PTHR27003	PANTHER:PTHR27003:SF94	SMART:SM00219	SUPFAM:SSF56112	SignalP:SignalP-noTM
TMHMM:TMhelix	InterPro:Tyr_kinase_cat_dom	UniParc:UPI000294BE8D	SEG:seg	:	:

Description

Putative Receptor-like protein kinase HERK 1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G28470_001]

Coordinates

chr5:-:28648112..28650616

Molecular Weight (calculated)

51584.8 Da

IEP (calculated)

4.912

GRAVY (calculated)

-0.005

Length

467 amino acids

Sequence
(BLAST)

001: MAIREIEARL IVFMMVAIRC VHCVFTPADN YLIDCGSLTN TTIGTRPRAN ATVVKEFSLN ITSDTLILTF APSTNTSFAF VNAIEVVSVP DNLIHDTAKI
101: VDPQGKYHGL SGQALETIYR INMGGPQVLP GDDTLWRTWE NDQKFLLTPG LSQSFNSTGK INYMDGATEE IAPQVVYATV VELSKDAQNT AGANVNVTWQ
201: FSVDANWDYL IRFHFSVFMD FVLKADDASV VVIPPGSNKN FGIILGSILG AVAVVVVAII LCVVLRKRKL AKQSSKTWNG DLGYRFSFTV LQEATNNFDE
301: NWVIGVGGFG KVYKGVLRDE TKVAKNEMIL VYEYMEKGTL KSHLYGSDLP PLVADFGLSK TGPEQRLTEK SDVYSFGVRG ELEQIVDTRI AGSVRPESLR
401: KFGETIEKCL ADSGVERPSM GDVLWNLEYV LHLQDADPSV SEIDMHNDLT DVSMSKVFSQ LIKSEGR

Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)

001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR

Arabidopsis Description

HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.