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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • nucleus 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:cytosol, nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d037544_P001 Maize plasma membrane 92.22 92.11
TraesCS1B01G130300.2 Wheat plasma membrane 75.57 74.67
TraesCS1D01G110900.1 Wheat plasma membrane 71.02 74.03
HORVU1Hr1G024070.1 Barley plasma membrane 74.49 73.96
TraesCS1A01G108100.1 Wheat plasma membrane 74.61 73.82
CDY49572 Canola cytosol 23.95 68.26
Solyc06g005230.1.1 Tomato plastid 29.58 66.04
GSMUA_Achr9P04140_001 Banana plasma membrane 42.63 62.35
PGSC0003DMT400043793 Potato cytosol, plastid 23.71 61.3
GSMUA_Achr11P... Banana cytosol 42.75 60.71
Solyc05g013300.1.1 Tomato cytosol 23.35 60.37
KXG20506 Sorghum plasma membrane 60.0 59.57
GSMUA_Achr5P28470_001 Banana plasma membrane 31.26 55.89
PGSC0003DMT400035099 Potato cytosol 25.27 55.67
PGSC0003DMT400043784 Potato cytosol 23.59 54.57
KRH10340 Soybean plasma membrane 48.26 54.39
KRH24985 Soybean plasma membrane 53.77 53.64
VIT_06s0004g03920.t01 Wine grape plasma membrane 52.46 53.48
Bra033826.1-P Field mustard cytosol, plasma membrane, plastid 46.11 53.32
CDX99115 Canola plasma membrane 52.1 53.24
CDX86076 Canola plasma membrane 52.1 53.18
KRG88684 Soybean plasma membrane 51.62 53.14
Bra018214.1-P Field mustard plasma membrane 52.81 52.94
CDX80236 Canola plasma membrane 51.14 52.85
CDX68370 Canola plasma membrane 51.62 52.56
AT3G46290.1 Thale cress plasma membrane 52.22 52.53
AT5G59700.1 Thale cress plasma membrane 51.62 51.99
CDX82981 Canola plasma membrane 51.74 51.8
PGSC0003DMT400040185 Potato plasma membrane 51.38 51.44
Solyc11g072910.1.1 Tomato plasma membrane 51.26 51.32
PGSC0003DMT400025093 Potato plasma membrane 50.9 51.27
Bra002541.1-P Field mustard plasma membrane 50.78 51.15
EER95065 Sorghum plasma membrane 51.26 49.03
VIT_13s0067g03780.t01 Wine grape plasma membrane 47.43 47.88
Solyc05g054860.1.1 Tomato plasma membrane 45.27 46.61
PGSC0003DMT400060442 Potato plasma membrane 44.67 45.6
KXG31830 Sorghum plasma membrane 46.83 44.79
KXG37500 Sorghum plasma membrane 44.07 43.55
EER89103 Sorghum plasma membrane 44.07 42.64
CDY07654 Canola plasma membrane 41.68 42.49
Bra000130.1-P Field mustard plasma membrane 41.32 42.18
CDY24966 Canola plasma membrane 40.96 41.86
AT2G39360.1 Thale cress plasma membrane 40.24 41.23
EER95602 Sorghum plasma membrane 42.04 40.96
OQU81104 Sorghum plasma membrane, vacuole 34.49 40.17
OQU86611 Sorghum cytosol 38.32 39.41
EES12876 Sorghum plasma membrane 38.68 38.13
KXG34391 Sorghum plasma membrane 38.2 37.66
EER94913 Sorghum plasma membrane 40.36 37.65
EES17952 Sorghum plasma membrane 38.8 37.24
EES11497 Sorghum plasma membrane 38.68 36.83
OQU77260 Sorghum plasma membrane 35.69 36.65
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:2.60.120.430Gene3D:3.30.200.20EntrezGene:8071202
UniProt:C5Z0P1EnsemblPlants:EES17770ProteinID:EES17770ProteinID:EES17770.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_domPFAM:PF07714PFAM:PF12819ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27003PANTHER:PTHR27003:SF89InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
EnsemblPlantsGene:SORBI_3009G055600SUPFAM:SSF56112unigene:Sbi.11916InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0001A8884FRefSeq:XP_002439340.1SEG:seg::
Description
hypothetical protein
Coordinates
chr9:+:5628809..5632389
Molecular Weight (calculated)
91874.9 Da
IEP (calculated)
6.516
GRAVY (calculated)
-0.050
Length
835 amino acids
Sequence
(BLAST)
001: MDSTAVGLKL VVLALSVAIW VFGACNANFT PADNYLINCG STVDATIDQR VFLADTSGPA ILTTPTNLST AATTSPNSVS GFDGAMLYQT ARIFPAASSY
101: AFKLKSRGRH FVRLHFFPFK YQSYDLTTAT FKVSTEDVVL LDNFTVPSSS SPVFKEYSLN ITRDMLILTF VPLGNNTPAF VNAIEVISVP DDLITDSALN
201: LEPVGQYLGL STQPLQTFYR INVGGPKVTP ENDTLWRTWV TDQSSFLNST PTTLHTFSGK LNFQNGLATE EDAPDSVYNT ARRLLNTTGS MSNMTWQFDV
301: DGRSSYLVRF HFCDIVSKAL YQLLFDVYLD SWSVMKNLDL SEKAFGNLAA PFYIDAVLLS SDPSGKLSVS IGPSAVQIAA PDGILNGLEI MKMNISTGSV
401: SVVKPSLGGK SHLGVILGSV LGVLAAIVIA IVICIFFRRK NKPHPPPSRT SSSWTPLNGL SFLTTGSRTS RTTLTSGTSG DTSYRIPFVV LQDATNHFDE
501: QMVIGVGGFG KVYKAVMQDG SKLAVKRGNQ KSHQGLREFR TEIELLSGLR HRHLVSLIGY CDEHNEMILV YEYMEKGTLK SHLYGGDMPP LSWKKRLEIC
601: IGAARGLHYL HTGFAKSIIH RDVKSANILL DENLLAKVSD FGLSKVGPEF DQTHVSTAVK GSFGYLDPEY FRRQKLTDKS DVYSFGVVLL EVICARPVID
701: PTLPRDMINL AEWAIKWQKR GELDQIVDQR IAGTVRPEAL RKFGETVEKC LAEYGVERPT MGDVLWNLEF VLQLQEAGPD MSNIDSMNQI SELPSNANRV
801: SSLDISTTDQ SRMPIEYSDM STSNAFSQLI NAEGR
Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)
001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR
Arabidopsis Description
HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.