Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033826.1-P | Field mustard | cytosol, plasma membrane, plastid | 75.78 | 87.12 |
| CDX86076 | Canola | plasma membrane | 83.37 | 84.6 |
| CDX68370 | Canola | plasma membrane | 83.37 | 84.39 |
| Bra018214.1-P | Field mustard | plasma membrane | 84.58 | 84.27 |
| CDX82981 | Canola | plasma membrane | 84.46 | 84.05 |
| CDX99115 | Canola | plasma membrane | 82.53 | 83.84 |
| AT5G59700.1 | Thale cress | plasma membrane | 75.54 | 75.63 |
| GSMUA_Achr9P04140_001 | Banana | plasma membrane | 40.96 | 59.54 |
| GSMUA_Achr11P... | Banana | cytosol | 42.05 | 59.35 |
| KXG20506 | Sorghum | plasma membrane | 57.71 | 56.96 |
| Zm00001d046838_P002 | Maize | plasma membrane | 57.47 | 56.65 |
| Os06t0334300-01 | Rice | plasma membrane | 57.71 | 55.76 |
| TraesCS7A01G340700.1 | Wheat | plasma membrane, plastid | 56.99 | 55.26 |
| TraesCS7B01G241900.1 | Wheat | plasma membrane | 56.75 | 55.22 |
| HORVU7Hr1G081590.1 | Barley | plasma membrane, plastid | 56.63 | 54.91 |
| TraesCS7D01G338800.3 | Wheat | plastid | 56.75 | 53.46 |
| GSMUA_Achr5P28470_001 | Banana | plasma membrane | 29.76 | 52.89 |
| EES17770 | Sorghum | plasma membrane | 52.53 | 52.22 |
| Zm00001d037544_P001 | Maize | plasma membrane | 52.29 | 51.91 |
| HORVU1Hr1G024070.1 | Barley | plasma membrane | 51.45 | 50.77 |
| TraesCS1B01G130300.2 | Wheat | plasma membrane | 51.33 | 50.41 |
| TraesCS1A01G108100.1 | Wheat | plasma membrane | 51.2 | 50.36 |
| TraesCS1D01G110900.1 | Wheat | plasma membrane | 48.31 | 50.06 |
| AT5G54380.1 | Thale cress | plasma membrane | 51.33 | 49.82 |
| Os03t0281500-01 | Rice | plasma membrane | 49.88 | 49.34 |
| Zm00001d028686_P001 | Maize | plasma membrane | 49.88 | 48.65 |
| HORVU4Hr1G058220.1 | Barley | plasma membrane | 49.28 | 48.52 |
| TraesCS4B01G201600.1 | Wheat | plasma membrane | 49.4 | 48.35 |
| TraesCS4A01G102900.1 | Wheat | plasma membrane | 49.28 | 48.17 |
| TraesCS4D01G202300.1 | Wheat | plasma membrane | 48.92 | 47.82 |
| AT5G24010.1 | Thale cress | plasma membrane | 47.23 | 47.57 |
| EER95065 | Sorghum | plasma membrane | 49.64 | 47.19 |
| AT5G61350.1 | Thale cress | plasma membrane | 46.14 | 45.49 |
| AT4G39110.1 | Thale cress | plasma membrane | 47.59 | 44.99 |
| AT2G39360.1 | Thale cress | plasma membrane | 43.98 | 44.79 |
| AT2G21480.1 | Thale cress | plasma membrane | 46.75 | 44.55 |
| AT3G51550.1 | Thale cress | plasma membrane | 43.86 | 40.67 |
| AT2G23200.1 | Thale cress | plasma membrane | 40.24 | 40.05 |
| KXG31830 | Sorghum | plasma membrane | 41.93 | 39.86 |
| AT1G30570.1 | Thale cress | plasma membrane | 40.6 | 39.69 |
| Os01t0155500-01 | Rice | plasma membrane | 44.46 | 39.42 |
| HORVU3Hr1G086590.1 | Barley | plasma membrane | 42.41 | 38.94 |
| TraesCS3D01G134400.1 | Wheat | plasma membrane | 42.17 | 38.8 |
| TraesCS3A01G308100.1 | Wheat | mitochondrion, plasma membrane | 42.29 | 38.66 |
| TraesCS3B01G151200.1 | Wheat | mitochondrion, plasma membrane | 42.17 | 38.5 |
| AT3G04690.1 | Thale cress | plasma membrane | 38.31 | 37.41 |
| HORVU3Hr1G024950.4 | Barley | plasma membrane | 42.41 | 37.37 |
| AT5G28680.1 | Thale cress | plasma membrane | 38.43 | 37.18 |
| AT5G38990.1 | Thale cress | plasma membrane | 37.23 | 35.11 |
| AT5G39000.1 | Thale cress | plasma membrane | 36.75 | 34.94 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:11.10.2.4.2 | MapMan:18.4.1.16 | Gene3D:2.60.120.430 | Gene3D:3.30.200.20 | EntrezGene:823774 |
| ProteinID:AEE78143.1 | ArrayExpress:AT3G46290 | EnsemblPlantsGene:AT3G46290 | RefSeq:AT3G46290 | TAIR:AT3G46290 | RefSeq:AT3G46290-TAIR-G |
| EnsemblPlants:AT3G46290.1 | TAIR:AT3G46290.1 | Unigene:At.546 | ProteinID:CAB62020.1 | ProteinID:CAB90956.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009506 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009741 | GO:GO:0009826 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0040007 | Symbol:HERK1 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | InterPro:Malectin-like_Carb-bd_dom | RefSeq:NP_190214.1 | PFAM:PF07714 | PFAM:PF12819 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27003 | PANTHER:PTHR27003:SF94 | InterPro:Prot_kinase_dom |
| InterPro:Protein_kinase_ATP_BS | UniProt:Q9LX66 | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS |
| TMHMM:TMhelix | UniParc:UPI00000487ED | SEG:seg | : | : | : |
Description
HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
Coordinates
chr3:+:17012500..17015885
Molecular Weight (calculated)
91472.6 Da
IEP (calculated)
6.252
GRAVY (calculated)
-0.183
Length
830 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.