Factsheet for Zm00001d028686_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95065	Sorghum	plasma membrane	88.72	86.48
Os03t0281500-01	Rice	plasma membrane	69.8	70.8
TraesCS4A01G102900.1	Wheat	plasma membrane	68.16	68.32
TraesCS4D01G202300.1	Wheat	plasma membrane	68.04	68.2
HORVU4Hr1G058220.1	Barley	plasma membrane	67.33	67.97
TraesCS4B01G201600.1	Wheat	plasma membrane	67.57	67.81
CDY49572	Canola	cytosol	22.8	66.21
Solyc06g005230.1.1	Tomato	plastid	28.67	65.24
PGSC0003DMT400043793	Potato	cytosol, plastid	22.91	60.37
Solyc05g013300.1.1	Tomato	cytosol	22.21	58.51
GSMUA_Achr9P04140_001	Banana	plasma membrane	38.9	57.97
GSMUA_Achr11P...	Banana	cytosol	39.95	57.82
Zm00001d046838_P002	Maize	plasma membrane	53.58	54.16
PGSC0003DMT400043784	Potato	cytosol	22.91	54.02
PGSC0003DMT400035099	Potato	cytosol	23.62	53.03
Bra033826.1-P	Field mustard	cytosol, plasma membrane, plastid	44.07	51.94
KRH10340	Soybean	plasma membrane	45.12	51.82
CDX99115	Canola	plasma membrane	49.59	51.65
Zm00001d037544_P001	Maize	plasma membrane	50.53	51.44
VIT_06s0004g03920.t01	Wine grape	plasma membrane	49.47	51.4
KRH24985	Soybean	plasma membrane	50.29	51.13
CDX86076	Canola	plasma membrane	49.12	51.1
Bra018214.1-P	Field mustard	plasma membrane	49.82	50.9
GSMUA_Achr5P28470_001	Banana	plasma membrane	27.85	50.75
KRG88684	Soybean	plasma membrane	48.18	50.55
PGSC0003DMT400040185	Potato	plasma membrane	49.24	50.24
Solyc11g072910.1.1	Tomato	plasma membrane	49.12	50.12
CDX80236	Canola	plasma membrane	47.47	50.0
PGSC0003DMT400025093	Potato	plasma membrane	48.65	49.94
AT3G46290.1	Thale cress	plasma membrane	48.65	49.88
CDX68370	Canola	plasma membrane	48.06	49.88
CDX82981	Canola	plasma membrane	48.65	49.64
AT5G59700.1	Thale cress	plasma membrane	47.94	49.22
Bra002541.1-P	Field mustard	plasma membrane	47.59	48.85
VIT_13s0067g03780.t01	Wine grape	plasma membrane	47.0	48.37
Solyc05g054860.1.1	Tomato	plasma membrane	43.83	45.99
PGSC0003DMT400060442	Potato	plasma membrane	44.07	45.84
CDY24966	Canola	plasma membrane	41.25	42.96
Zm00001d034089_P001	Maize	plasma membrane	42.42	42.93
AT2G39360.1	Thale cress	plasma membrane	40.78	42.58
Zm00001d045515_P001	Maize	plasma membrane	42.54	42.54
CDY07654	Canola	plasma membrane	40.89	42.49
Bra000130.1-P	Field mustard	plasma membrane	40.66	42.3
Zm00001d027436_P001	Maize	mitochondrion	38.9	41.32
Zm00001d029047_P001	Maize	plasma membrane	40.54	38.94
Zm00001d047533_P001	Maize	mitochondrion, plasma membrane	40.31	38.63
Zm00001d002282_P001	Maize	plastid	37.96	37.87
Zm00001d037839_P001	Maize	plasma membrane	38.07	37.24
Zm00001d040269_P001	Maize	plasma membrane	38.31	37.21
Zm00001d008347_P001	Maize	plasma membrane	37.96	36.58
Zm00001d002175_P001	Maize	plasma membrane	38.54	36.57
Zm00001d018789_P001	Maize	mitochondrion	38.78	35.99
Zm00001d035992_P001	Maize	plasma membrane	40.78	34.87

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:103634478	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:2.60.120.430	Gene3D:3.30.200.20
UniProt:A0A1D6JYK4	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Malectin-like_Carb-bd_dom	ProteinID:ONL96729.1
PFAM:PF07714	PFAM:PF12819	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF65	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002214563	EnsemblPlantsGene:Zm00001d028686	EnsemblPlants:Zm00001d028686_P001
EnsemblPlants:Zm00001d028686_T001	SEG:seg	:	:	:	:

Description

Receptor-like protein kinase HERK 1

Coordinates

chr1:+:43080647..43083202

Molecular Weight (calculated)

91134.9 Da

IEP (calculated)

8.352

GRAVY (calculated)

-0.015

Length

851 amino acids

Sequence
(BLAST)

001: MARAVLDTLL RVAVVLLLLP ALVAAAFTPA DDYLVLCGTA ANATVDGRTF LGDDGLPAAA VLPAPRGSEA SASAASGSDD AALYRSARVF AAPSSYTFAI
101: KSPGRHFVRL HFFPFRYGSG DLAADAEFSV SAQGLLLIDG YAPANGTPAV REFSVNVAGG TLAVAFAPAA AGKVAFVNAI EVVSHPDDLF ADTAQTVSPM
201: GRYAGLSTQA LETVNRVNMG SPKITPRNDT LGRTWLPDEA FLVDSSVTVH RDVAPSKLRW TPGLATPETA PGMVYATATE INTNLVSAST ISVQFNMTWK
301: LQAAPGSAYL LRLHFCDIVS KAANGLVFNV YVGGWNVLPD YEISRDTFSV PAVPLYKDFV LSAKDAKGNI TVSIGTSTLG NAYPDGVLNG LEIMRMVGST
401: GGGADSSQSG SKKKTVTAII AGSAIAGVIT VVMAVALIVL MLRRRRKKPE KKPSSTWVAF SESALGSRSH SRSFGKSSSA GARNNTVTLG QSAGAGYRIP
501: LAALQEATCG FDEGMVIGVG GFGKVYKGTL RDETQVAVKR GNRRSQQGLN EFRTEIELLS RLRHRHLVSL IGYCDERGEM ILVYEYMARG TLRSHLYDSE
601: LPPLSWKQRL DVCIGAARGL HYLHTGSAKA IIHRDVKSAN ILLDDSFMAK VADFGLSKTG PELDKTHVST AVKGSFGYLD PEYFRRQMLT NKSDVYSFGV
701: VLLEVLCARP VIDPTLPREM VNLAEWATQR LKNGELDSIV DQRIAGSIRP ESLKKFVDTA EKCLAEYGVE RPAIGDVLWC LEFALQLQEA SPDSSGTDNT
801: QLVHRSTSKF HRNQSTVSDG TEATVAANLG DLDGMSMRRV FSKMVNSEEG R

Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)

001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR

Arabidopsis Description

HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.