Factsheet for PGSC0003DMT400043784

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g013300.1.1	Tomato	cytosol	65.65	73.37
PGSC0003DMT400043793	Potato	cytosol, plastid	63.16	70.59
PGSC0003DMT400035099	Potato	cytosol	69.81	66.49
GSMUA_Achr9P04140_001	Banana	plasma membrane	48.2	30.47
PGSC0003DMT400040185	Potato	plasma membrane	68.7	29.74
VIT_06s0004g03920.t01	Wine grape	plasma membrane	67.31	29.67
KRG88684	Soybean	plasma membrane	65.65	29.22
PGSC0003DMT400025093	Potato	plasma membrane	66.76	29.07
KRH24985	Soybean	plasma membrane	65.93	28.43
GSMUA_Achr11P...	Banana	cytosol	45.98	28.23
KRH10340	Soybean	plasma membrane	53.74	26.18
PGSC0003DMT400090495	Potato	plasma membrane	58.45	25.27
PGSC0003DMT400049559	Potato	plasma membrane	58.45	25.27
PGSC0003DMT400063408	Potato	mitochondrion	52.63	25.23
TraesCS7A01G340700.1	Wheat	plasma membrane, plastid	59.28	25.0
TraesCS7B01G241900.1	Wheat	plasma membrane	59.0	24.97
KXG20506	Sorghum	plasma membrane	57.89	24.85
PGSC0003DMT400064427	Potato	plasma membrane	57.34	24.82
HORVU7Hr1G081590.1	Barley	plasma membrane, plastid	58.73	24.77
TraesCS1D01G110900.1	Wheat	plasma membrane	54.85	24.72
Zm00001d046838_P002	Maize	plasma membrane	57.62	24.7
Os06t0334300-01	Rice	plasma membrane	57.89	24.33
PGSC0003DMT400060204	Potato	plasma membrane	56.51	24.23
TraesCS7D01G338800.3	Wheat	plastid	59.0	24.18
Os03t0281500-01	Rice	plasma membrane	55.68	23.96
HORVU1Hr1G024070.1	Barley	plasma membrane	55.4	23.78
PGSC0003DMT400060442	Potato	plasma membrane	53.46	23.59
EES17770	Sorghum	plasma membrane	54.57	23.59
Zm00001d037544_P001	Maize	plasma membrane	54.57	23.56
PGSC0003DMT400067688	Potato	plasma membrane	53.19	23.47
TraesCS1B01G130300.2	Wheat	plasma membrane	54.85	23.43
GSMUA_Achr5P28470_001	Banana	plasma membrane	30.19	23.34
TraesCS1A01G108100.1	Wheat	plasma membrane	54.29	23.22
TraesCS4B01G201600.1	Wheat	plasma membrane	54.29	23.11
HORVU4Hr1G058220.1	Barley	plasma membrane	53.74	23.01
TraesCS4A01G102900.1	Wheat	plasma membrane	54.02	22.97
TraesCS4D01G202300.1	Wheat	plasma membrane	54.02	22.97
Zm00001d028686_P001	Maize	plasma membrane	54.02	22.91
EER95065	Sorghum	plasma membrane	54.02	22.34
PGSC0003DMT400094265	Potato	plasma membrane	53.46	22.11
PGSC0003DMT400008766	Potato	plasma membrane	53.19	22.02
PGSC0003DMT400038535	Potato	plasma membrane	49.86	22.0
PGSC0003DMT400076840	Potato	plasma membrane	54.02	21.93
PGSC0003DMT400054599	Potato	plasma membrane	52.35	21.77
PGSC0003DMT400056220	Potato	plasma membrane	49.86	21.08
PGSC0003DMT400018850	Potato	plasma membrane	51.8	21.03
PGSC0003DMT400003461	Potato	plasma membrane	50.14	20.73
PGSC0003DMT400003464	Potato	plasma membrane	49.03	20.68
Os01t0155500-01	Rice	plasma membrane	51.25	19.77
KXG31830	Sorghum	plasma membrane	46.81	19.36
TraesCS3D01G134400.1	Wheat	plasma membrane	48.2	19.29
TraesCS3A01G308100.1	Wheat	mitochondrion, plasma membrane	48.2	19.16
TraesCS3B01G151200.1	Wheat	mitochondrion, plasma membrane	48.2	19.14
HORVU3Hr1G086590.1	Barley	plasma membrane	47.92	19.14
PGSC0003DMT400018829	Potato	plasma membrane	51.25	18.56
HORVU3Hr1G024950.4	Barley	plasma membrane	47.92	18.37
PGSC0003DMT400091500	Potato	plasma membrane	42.94	13.66
PGSC0003DMT400027429	Potato	plasma membrane	44.04	13.38

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102589331	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BF70	PFAM:PF07714
EnsemblPlantsGene:PGSC0003DMG400016993	PGSC:PGSC0003DMG400016993	EnsemblPlants:PGSC0003DMT400043784	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF94	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294D1AF	RefSeq:XP_006367156.1

Description

Pto-like serine/threonine kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400016993]

Coordinates

chr5:-:9683191..9684276

Molecular Weight (calculated)

40889.5 Da

IEP (calculated)

4.949

GRAVY (calculated)

-0.296

Length

361 amino acids

Sequence
(BLAST)

001: MGTKYSKATT YVTDTMSYHV PFESFRVPFV ALQEATNNFD ESLVIGVGGF GKIYRVLLCD GTKVALKRYT PESNQGLQEF QTEIEILSKF CHPHLVSLIG
101: YCDENNEMIL IYEYMENGNL RNHLYGSDLP SMSWEQRLEI CIGAARGLHY LHTNAVIHRD VKSLNILLDE NFVAKISDFG ISKKGTEPDQ TRVTTIVKGT
201: VAYLDPEYYL SSLVTEKSDV YSFGVVLFEV LCARPAMDSS RSRKMFSLAN WAMECQKNGQ LERIIDPNLV GKIRPDSLRK FGETAVKCLA DYGVDRPSMG
301: DVLWKLEYAL HLQEPVIQDD PAEHSTIPNR DQINDFSHVD DSSSAASIET SNWDDIYIRD K

Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)

001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR

Arabidopsis Description

HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.