Factsheet for TraesCS1A01G108100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G110900.1	Wheat	plasma membrane	93.13	98.13
TraesCS1B01G130300.2	Wheat	plasma membrane	97.16	97.04
HORVU1Hr1G024070.1	Barley	plasma membrane	92.89	93.22
EES17770	Sorghum	plasma membrane	73.82	74.61
Zm00001d037544_P001	Maize	plasma membrane	73.1	73.8
CDY49572	Canola	cytosol	24.05	69.28
Solyc06g005230.1.1	Tomato	plastid	29.62	66.84
PGSC0003DMT400043793	Potato	cytosol, plastid	23.58	61.61
GSMUA_Achr9P04140_001	Banana	plasma membrane	40.64	60.07
GSMUA_Achr11P...	Banana	cytosol	41.47	59.52
Solyc05g013300.1.1	Tomato	cytosol	22.27	58.2
TraesCS7A01G340700.1	Wheat	plasma membrane, plastid	57.35	56.54
PGSC0003DMT400035099	Potato	cytosol	24.53	54.62
PGSC0003DMT400043784	Potato	cytosol	23.22	54.29
GSMUA_Achr5P28470_001	Banana	plasma membrane	29.98	54.18
Bra033826.1-P	Field mustard	cytosol, plasma membrane, plastid	45.62	53.32
CDX99115	Canola	plasma membrane	51.54	53.24
CDX86076	Canola	plasma membrane	51.18	52.81
Bra018214.1-P	Field mustard	plasma membrane	51.9	52.58
CDX68370	Canola	plasma membrane	51.07	52.56
VIT_06s0004g03920.t01	Wine grape	plasma membrane	50.95	52.5
KRH10340	Soybean	plasma membrane	46.09	52.5
CDX80236	Canola	plasma membrane	49.53	51.73
CDX82981	Canola	plasma membrane	51.07	51.68
PGSC0003DMT400025093	Potato	plasma membrane	50.47	51.39
KRG88684	Soybean	plasma membrane	49.29	51.29
AT5G59700.1	Thale cress	plasma membrane	50.36	51.27
AT3G46290.1	Thale cress	plasma membrane	50.36	51.2
KRH24985	Soybean	plasma membrane	50.59	51.02
PGSC0003DMT400040185	Potato	plasma membrane	50.36	50.96
Solyc11g072910.1.1	Tomato	plasma membrane	50.24	50.84
Bra002541.1-P	Field mustard	plasma membrane	49.29	50.18
TraesCS4A01G102900.1	Wheat	plasma membrane	48.93	48.65
VIT_13s0067g03780.t01	Wine grape	plasma membrane	45.5	46.43
Solyc05g054860.1.1	Tomato	plasma membrane	44.43	46.24
PGSC0003DMT400060442	Potato	plasma membrane	44.08	45.48
TraesCS3A01G308100.1	Wheat	mitochondrion, plasma membrane	46.92	43.61
TraesCS5A01G397100.1	Wheat	plasma membrane	42.77	42.67
TraesCS7A01G055000.1	Wheat	plasma membrane	42.42	42.37
TraesCS4A01G441600.1	Wheat	plasma membrane	41.71	41.71
CDY07654	Canola	plasma membrane	40.05	41.27
Bra000130.1-P	Field mustard	plasma membrane	39.69	40.95
CDY24966	Canola	plasma membrane	39.45	40.76
AT2G39360.1	Thale cress	plasma membrane	39.22	40.61
TraesCS2A01G079600.1	Wheat	plasma membrane	37.32	39.52
TraesCS5A01G514500.1	Wheat	plasma membrane	40.88	39.52
TraesCS4A01G133800.1	Wheat	plasma membrane	41.35	39.21
TraesCS1A01G227300.1	Wheat	plasma membrane	41.11	38.9
TraesCS2A01G253200.1	Wheat	plasma membrane	38.74	38.61
TraesCS2A01G463000.1	Wheat	plasma membrane	37.68	37.63
TraesCS3A01G171500.1	Wheat	plasma membrane	39.22	37.57
TraesCS3A01G072500.1	Wheat	plasma membrane	34.83	37.26
TraesCS5A01G330500.1	Wheat	plasma membrane	40.05	37.1
TraesCS4A01G001100.1	Wheat	plasma membrane	38.86	36.77

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:2.60.120.430	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Malectin-like_Carb-bd_dom	PFAM:PF07714	PFAM:PF12819
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF89	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1A01G108100	EnsemblPlants:TraesCS1A01G108100.1	TIGR:cd14066	SEG:seg	:

Description

No Description!

Coordinates

chr1A:-:107107556..107110090

Molecular Weight (calculated)

93511.6 Da

IEP (calculated)

7.438

GRAVY (calculated)

-0.171

Length

844 amino acids

Sequence
(BLAST)

001: MGTTTEQKIA LLLLGTIWVL LGTCNAAEFT PADNYLINCG STVDANLNDG RVFKADNSGS TILTSHHSVP ANTLPDAVIS SDNPVLYKTA RIFIVPSSYS
101: FNMKSRGRHF VRLHFFGFRY QSYDLAAAKF KVSTQHVVLL DNFTPPSNSS LLVREYSLNI TEDMLILSFV PLGNSTSFIN AIEVISVPDD LIQDSAQTVN
201: PSGQYLGLAT QSFQTFYRIN VGGREVTVVN DTLSRSWDTD QNFFINSTTT ELFAYQGKLN YQKGAATKED APDSVYNTAR RLAVQNRTSP ASNMTWQFDV
301: DGRSSYLIRF HFCDIVSKAA YSLYFDIYVD GGLALENLDL SEKVFGTLAV PYYTEFVLKS SNPSGKLSVG IGPSSLSNVA PDGILNGLEI MKMNISTGTI
401: YVVWPPATPK RKLAIILAPV LGGVGAVSIA IILCFVLRRK KEKKPRRAPT SRPSSSWSPL TLNGLSFLSI GTRTTSRTTH TSGTNSDVSY RIPFALLQVA
501: TKHFDEQMVV GVGGFGKVYK AVLQDSTKVA VKRGNQKSHQ GLKEFRTEIE LLSGLRHRHL VSLIGYCDDQ NEMILVYEYM EKGTLKSHLY GSDMPPLSWK
601: KRVEICIGAA RGLHYLHTGF AKSIIHRDVK SANILLDENL MAKVSDFGLS KTGPELDQTH VSTAVKGSFG YLDPEYYRRQ KLTDKSDVYS FGVVLLEVIC
701: ARPVIDPTLP RDMINLAEWA IKWQKRGELG QIVDQRIAGT IRPESLRKYG ETVEKCLVDY GVDRPTMGDV LWNLEFVLQL QEAGPDISNV DSMNQISELP
801: SDARRMGSLE IGTADEADEG RTHMDYSQMS TNDAFSQLMN TEGR

Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)

001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR

Arabidopsis Description

HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.