Factsheet for Solyc06g005230.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g063480.2.1	Tomato	cytosol, nucleus, plasma membrane	57.22	70.39
Solyc05g013300.1.1	Tomato	cytosol	54.55	63.16
Solyc03g059070.2.1	Tomato	plasma membrane	62.57	48.95
PGSC0003DMT400025093	Potato	plasma membrane	99.47	44.87
GSMUA_Achr9P04140_001	Banana	plasma membrane	62.03	40.63
KRG88684	Soybean	plasma membrane	86.63	39.95
Solyc11g072910.1.1	Tomato	plasma membrane	89.04	39.93
KRH24985	Soybean	plasma membrane	86.1	38.47
VIT_06s0004g03920.t01	Wine grape	plasma membrane	83.69	38.22
GSMUA_Achr11P...	Banana	cytosol	58.02	36.9
Solyc09g015830.1.1	Tomato	plastid	61.23	35.29
KRH10340	Soybean	plasma membrane	65.78	33.2
KXG20506	Sorghum	plasma membrane	73.26	32.58
Zm00001d046838_P002	Maize	plasma membrane	72.99	32.42
TraesCS7A01G340700.1	Wheat	plasma membrane, plastid	73.8	32.24
TraesCS7B01G241900.1	Wheat	plasma membrane	73.53	32.24
HORVU7Hr1G081590.1	Barley	plasma membrane, plastid	73.53	32.13
Os06t0334300-01	Rice	plasma membrane	73.53	32.01
TraesCS1D01G110900.1	Wheat	plasma membrane	67.38	31.46
TraesCS7D01G338800.3	Wheat	plastid	73.53	31.21
HORVU1Hr1G024070.1	Barley	plasma membrane	67.91	30.2
TraesCS1B01G130300.2	Wheat	plasma membrane	67.38	29.82
Solyc10g006870.1.1	Tomato	plasma membrane	66.84	29.76
Os03t0281500-01	Rice	plasma membrane	66.58	29.68
Zm00001d037544_P001	Maize	plasma membrane	66.31	29.67
TraesCS1A01G108100.1	Wheat	plasma membrane	66.84	29.62
EES17770	Sorghum	plasma membrane	66.04	29.58
Solyc06g009550.2.1	Tomato	plasma membrane	56.95	29.34
Solyc05g054680.1.1	Tomato	plasma membrane	65.78	29.22
GSMUA_Achr5P28470_001	Banana	plasma membrane	36.1	28.91
Solyc05g054860.1.1	Tomato	plasma membrane	62.57	28.85
Zm00001d028686_P001	Maize	plasma membrane	65.24	28.67
HORVU4Hr1G058220.1	Barley	plasma membrane	64.17	28.47
TraesCS4B01G201600.1	Wheat	plasma membrane	64.44	28.42
TraesCS4A01G102900.1	Wheat	plasma membrane	63.9	28.15
TraesCS4D01G202300.1	Wheat	plasma membrane	63.9	28.15
EER95065	Sorghum	plasma membrane	64.71	27.72
Solyc03g115710.1.1	Tomato	plasma membrane	61.76	27.27
Solyc01g059910.2.1	Tomato	plastid	54.81	26.55
Solyc01g109950.2.1	Tomato	plasma membrane	59.36	25.43
Solyc06g009540.1.1	Tomato	plasma membrane	59.36	25.03
Solyc03g044160.1.1	Tomato	plasma membrane	54.55	24.97
Solyc07g008400.1.1	Tomato	plasma membrane	55.08	24.12
Solyc02g089090.2.1	Tomato	plasma membrane	55.62	23.94
Os01t0155500-01	Rice	plasma membrane	59.09	23.61
TraesCS3D01G134400.1	Wheat	plasma membrane	55.62	23.06
KXG31830	Sorghum	plasma membrane	53.74	23.02
TraesCS3A01G308100.1	Wheat	mitochondrion, plasma membrane	55.62	22.91
HORVU3Hr1G086590.1	Barley	plasma membrane	55.08	22.79
TraesCS3B01G151200.1	Wheat	mitochondrion, plasma membrane	55.35	22.77
HORVU3Hr1G024950.4	Barley	plasma membrane	55.08	21.87
Solyc10g054050.1.1	Tomato	plasma membrane	44.65	21.01
Solyc02g069970.2.1	Tomato	plasma membrane	32.62	18.26
Solyc02g014030.1.1	Tomato	plasma membrane	46.79	15.19

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	UniProt:K4C307	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF94	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc06g005230.1
EnsemblPlants:Solyc06g005230.1.1	UniParc:UPI0002765B23	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6:-:247453..248577

Molecular Weight (calculated)

41577.7 Da

IEP (calculated)

5.668

GRAVY (calculated)

-0.255

Length

374 amino acids

Sequence
(BLAST)

001: MGSKYSNGTT LSAASNLSYR IPFAAMLAAT KKFDESLVIG IGGFGKVFKG VLNDGTNVAI KRGNPSSQQG LREFQTEIEM LSQFRHRHLV SLIGYCDEKN
101: EMILVYEYME NGTLKSHLYG SDMPSMSWKQ RLEICIGAAR GLHYLHTSYA KAVIHRDVKS ANILLDENMM AKVADFGLSK AGPELDQTHV STAVKGSFGY
201: LDPEYFRRQQ LTEKSDVYSF GVVLFEVLCA RPVIDPSLPR EMVNLAEWAM KWQKKGQLEQ IIDPNLAGKI RPDSLRKFGE TAEKCLADFG VDRPSMGDVL
301: WNLEYALQLQ EAVIQVDPDE NSSNLIGELS PQVNDFSHVD ATTSAMQFEA SNLDDLSGVS MSKVFSQLVK SEGR

Best Arabidopsis Sequence Match ( AT2G39360.1 )
(BLAST)

001: MINLKLFLEL KLCFLITLLC SSHISSVSDT FFINCGSPTN VTVNNRTFVS DNNLVQGFSV GTTDSNSGDE STLFQTARVF SDESSSTYRF PIEEHGWFLI
101: RIYFLPLVSA SQDLTTARFS VSAQNFTLIR EYKPSTTSVV REYILNVTTD SLLLQFLPRT GSVSFINALE VLRLPETLIP EDAKLIGTQK DLKLSSHAME
201: TVSRVNMGNL SVSRDQDKLW RQWDSDSAYK AHFGTPVMNL KAVNFSAGGI TDDIAPVYVY GTATRLNSDL DPNTNANLTW TFKVEPGFDY FVRFHFCNII
301: VDPFGFERQI RFDIFVNSEK VRTIDMTEVL NGTFGAPFFV DAVMRKAKSR EGFLNLSIGL VMDVSSYPVS FINGFEISKL SNDKRSLDAF DAILPDGSSS
401: NKSSNTSVGL IAGLSAALCV ALVFGVVVSW WCIRKRRRRN RQMQTVHSRG DDHQIKKNET GESLIFSSSK IGYRYPLALI KEATDDFDES LVIGVGGFGK
501: VYKGVLRDKT EVAVKRGAPQ SRQGLAEFKT EVEMLTQFRH RHLVSLIGYC DENSEMIIVY EYMEKGTLKD HLYDLDDKPR LSWRQRLEIC VGAARGLHYL
601: HTGSTRAIIH RDVKSANILL DDNFMAKVAD FGLSKTGPDL DQTHVSTAVK GSFGYLDPEY LTRQQLTEKS DVYSFGVVML EVVCGRPVID PSLPREKVNL
701: IEWAMKLVKK GKLEDIIDPF LVGKVKLEEV KKYCEVTEKC LSQNGIERPA MGDLLWNLEF MLQVQAKDEK AAMVDDKPEA SVVGSTMQFS VNGVGDIAGV
801: SMSKVFAQMV REETR

Arabidopsis Description

Probable receptor-like protein kinase At2g39360 [Source:UniProtKB/Swiss-Prot;Acc:O80623]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.