Factsheet for TraesCS3D01G134400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 6
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G308100.1	Wheat	mitochondrion, plasma membrane	94.68	94.05
TraesCS3B01G151200.1	Wheat	mitochondrion, plasma membrane	94.23	93.51
HORVU3Hr1G086590.1	Barley	plasma membrane	90.91	90.71
HORVU3Hr1G024950.4	Barley	plasma membrane	90.91	87.05
Os01t0155500-01	Rice	plasma membrane	69.4	66.88
KXG31830	Sorghum	plasma membrane	62.86	64.95
Solyc06g005230.1.1	Tomato	plastid	23.06	55.62
CDY49572	Canola	cytosol	17.74	54.61
PGSC0003DMT400043793	Potato	cytosol, plastid	19.4	54.18
Solyc05g013300.1.1	Tomato	cytosol	19.18	53.56
PGSC0003DMT400035099	Potato	cytosol	20.84	49.6
GSMUA_Achr9P04140_001	Banana	plasma membrane	31.15	49.21
GSMUA_Achr11P...	Banana	cytosol	31.93	48.98
PGSC0003DMT400043784	Potato	cytosol	19.29	48.2
TraesCS1D01G110900.1	Wheat	plasma membrane	42.68	48.06
KRH10340	Soybean	plasma membrane	37.36	45.48
KRG88684	Soybean	plasma membrane	39.58	44.02
PGSC0003DMT400040185	Potato	plasma membrane	40.69	44.0
Solyc11g072910.1.1	Tomato	plasma membrane	40.69	44.0
KRH24985	Soybean	plasma membrane	40.8	43.97
CDX80236	Canola	plasma membrane	39.36	43.94
VIT_06s0004g03920.t01	Wine grape	plasma membrane	39.69	43.71
TraesCS7D01G338800.3	Wheat	plastid	42.46	43.47
CDX99115	Canola	plasma membrane	39.25	43.33
Bra033826.1-P	Field mustard	cytosol, plasma membrane, plastid	34.59	43.21
PGSC0003DMT400025093	Potato	plasma membrane	39.58	43.06
Bra002541.1-P	Field mustard	plasma membrane	39.58	43.06
CDX86076	Canola	plasma membrane	38.91	42.91
AT5G59700.1	Thale cress	plasma membrane	39.36	42.82
CDX68370	Canola	plasma membrane	38.91	42.8
Bra018214.1-P	Field mustard	plasma membrane	39.36	42.62
GSMUA_Achr5P28470_001	Banana	plasma membrane	21.95	42.4
AT3G46290.1	Thale cress	plasma membrane	38.8	42.17
CDX82981	Canola	plasma membrane	38.91	42.09
TraesCS4D01G202300.1	Wheat	plasma membrane	39.47	41.93
VIT_13s0067g03780.t01	Wine grape	plasma membrane	37.69	41.11
Solyc05g054860.1.1	Tomato	plasma membrane	35.26	39.21
PGSC0003DMT400060442	Potato	plasma membrane	35.03	38.63
TraesCS5D01G406800.1	Wheat	plasma membrane	35.81	38.18
TraesCS4D01G340500.1	Wheat	plasma membrane	35.92	37.16
TraesCS7D01G050100.1	Wheat	plasma membrane	34.48	36.85
TraesCS2D01G509800.1	Wheat	plasma membrane	33.37	36.62
CDY24966	Canola	plasma membrane	32.59	35.99
CDY07654	Canola	plasma membrane	32.59	35.9
Bra000130.1-P	Field mustard	plasma membrane	32.37	35.7
AT2G39360.1	Thale cress	plasma membrane	31.82	35.21
TraesCS5D01G094700.1	Wheat	cytosol, peroxisome, plastid	23.28	35.0
TraesCS4D01G173100.1	Wheat	plasma membrane	34.48	34.94
TraesCS5D01G336300.1	Wheat	plasma membrane	34.04	34.69
TraesCS1D01G228900.1	Wheat	plasma membrane	33.92	34.27
TraesCS2D01G253800.1	Wheat	plasma membrane	31.6	33.73
TraesCS2D01G463600.1	Wheat	plasma membrane	31.6	33.73
TraesCS4D01G004300.1	Wheat	plasma membrane	30.82	33.62
TraesCS3D01G072100.1	Wheat	plasma membrane	30.93	33.37
TraesCS3D01G072200.1	Wheat	plasma membrane	31.04	33.25
TraesCS3D01G178200.1	Wheat	plasma membrane	32.26	33.11
TraesCS4D01G001000.1	Wheat	plasma membrane	31.93	32.36
TraesCS3D01G512100.1	Wheat	plasma membrane	29.16	31.42
TraesCS3D01G511100.1	Wheat	plasma membrane	19.51	28.03

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:2.60.120.430	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Malectin-like_Carb-bd_dom	PFAM:PF07714	PFAM:PF12819
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF67	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G134400	EnsemblPlants:TraesCS3D01G134400.1	TIGR:cd14066	SEG:seg	:

Description

No Description!

Coordinates

chr3D:+:93479427..93482373

Molecular Weight (calculated)

97021.5 Da

IEP (calculated)

6.225

GRAVY (calculated)

-0.042

Length

902 amino acids

Sequence
(BLAST)

001: MAATARLRPA RARGVLWVVS VLLVCGAAAY KPEDNYLVSC GSSLDTPVGR RLFLADDGAS GAVTLTSPRS AAVKAPPDLV SGFRDAALYQ NARVFSAPSS
101: YSFAIRRRGR HFLRLHFFPF VYRSYDLAAA ARAFKVSTQD AVLLEDGIPA PEPGNASTST SPQPARLEFL LDVARDTLVV SFVPLADGGI AFVNAVELVS
201: VPDGLVADAA DSSTGRPEPI PAVLPLQTAY RLNVGGPAVA PDDDALWREW TTDLRFLSHS VADAVTREVR YNGMLNRLPG QATATDAPDI VYATARELVI
301: NGSSFDGQKQ MAWQFDVDTS SSYFIRFHFC DIVGKAPHQL HINAYVDDAT VKQDLDLAAV GDGALAFPYY TDFVLPASEA SGKLAVHVGP LANKIVMPAA
401: ILNGIEIMKM HLSAGSVVVV QPAAGAAKSR FAVVLGSVCG ALAFISVAVA LAIVLRKKEK EKEVEEGAKE QPTPTQSQSS TPWMPLLGRF SVRGAIASGS
501: SSFTTAGNTP GASPRAAAAA AVMPSYRFPL AMLQDATRNF DDSLIIGEGG FGKVYGAVLQ DGTKVAVKRA SPESQQGARE FRTEIELLSG LRHRHLVSLV
601: GYCDEREEMI LLYEYMEHGS LRSRLYGRGG AAPLSWAQRL EACAGAARGL LYLHTAVDKP VIHRDVKSSN ILLDGDLAGK VADFGLSKAG PVLDETHVST
701: AVKGSFGYVD PEYCRTRQLT AKSDVYSLGV VLLEAVCARP VVDPRLPKPM SNLVEWGLHW QGRGELEKIV DRRIAAAARP AALRKYGETV ARCLAERGAD
801: RPAMEDVVWN LQFVMRLQEG DGLDFSDVSS LNMVTELTPP RRQRSAVDHD GLDYSDVNSL NMVTELTPPQ TGSVEGDGEA DDDFTDASMR GTFWQMVNVR
901: SR

Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)

001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR

Arabidopsis Description

HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.