Factsheet for Solyc05g013300.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043784	Potato	cytosol	73.37	65.65
Solyc06g005230.1.1	Tomato	plastid	63.16	54.55
Solyc07g063480.2.1	Tomato	cytosol, nucleus, plasma membrane	48.61	51.64
Solyc03g059070.2.1	Tomato	plasma membrane	56.97	38.49
GSMUA_Achr9P04140_001	Banana	plasma membrane	53.56	30.3
GSMUA_Achr11P...	Banana	cytosol	51.08	28.06
Solyc09g015830.1.1	Tomato	plastid	56.04	27.89
KRG88684	Soybean	plasma membrane	66.56	26.51
Solyc11g072910.1.1	Tomato	plasma membrane	67.8	26.26
KRH24985	Soybean	plasma membrane	66.87	25.81
VIT_06s0004g03920.t01	Wine grape	plasma membrane	65.02	25.64
KRH10340	Soybean	plasma membrane	57.89	25.24
Solyc06g009550.2.1	Tomato	plasma membrane	54.49	24.24
TraesCS1D01G110900.1	Wheat	plasma membrane	58.82	23.72
KXG20506	Sorghum	plasma membrane	61.61	23.66
Zm00001d046838_P002	Maize	plasma membrane	61.3	23.52
TraesCS7B01G241900.1	Wheat	plasma membrane	61.92	23.45
Os06t0334300-01	Rice	plasma membrane	62.23	23.4
HORVU7Hr1G081590.1	Barley	plasma membrane, plastid	61.92	23.36
TraesCS7A01G340700.1	Wheat	plasma membrane, plastid	61.92	23.36
EES17770	Sorghum	plasma membrane	60.37	23.35
GSMUA_Achr5P28470_001	Banana	plasma membrane	33.75	23.34
Zm00001d037544_P001	Maize	plasma membrane	59.44	22.97
TraesCS7D01G338800.3	Wheat	plastid	61.92	22.7
Os03t0281500-01	Rice	plasma membrane	58.82	22.65
Solyc10g006870.1.1	Tomato	plasma membrane	58.82	22.62
HORVU1Hr1G024070.1	Barley	plasma membrane	58.82	22.59
TraesCS1B01G130300.2	Wheat	plasma membrane	58.82	22.49
Solyc03g115710.1.1	Tomato	plasma membrane	58.82	22.43
TraesCS1A01G108100.1	Wheat	plasma membrane	58.2	22.27
Zm00001d028686_P001	Maize	plasma membrane	58.51	22.21
Solyc05g054680.1.1	Tomato	plasma membrane	57.89	22.21
Solyc05g054860.1.1	Tomato	plasma membrane	55.73	22.19
TraesCS4B01G201600.1	Wheat	plasma membrane	57.89	22.05
HORVU4Hr1G058220.1	Barley	plasma membrane	56.97	21.83
TraesCS4D01G202300.1	Wheat	plasma membrane	57.28	21.79
TraesCS4A01G102900.1	Wheat	plasma membrane	57.28	21.79
EER95065	Sorghum	plasma membrane	58.82	21.76
Solyc01g059910.2.1	Tomato	plastid	52.01	21.76
Solyc03g044160.1.1	Tomato	plasma membrane	52.94	20.93
Solyc01g109950.2.1	Tomato	plasma membrane	56.04	20.73
Solyc07g008400.1.1	Tomato	plasma membrane	53.87	20.37
Solyc06g009540.1.1	Tomato	plasma membrane	55.73	20.29
Solyc02g089090.2.1	Tomato	plasma membrane	53.25	19.79
HORVU3Hr1G086590.1	Barley	plasma membrane	54.18	19.36
TraesCS3D01G134400.1	Wheat	plasma membrane	53.56	19.18
TraesCS3A01G308100.1	Wheat	mitochondrion, plasma membrane	53.87	19.16
TraesCS3B01G151200.1	Wheat	mitochondrion, plasma membrane	53.56	19.03
KXG31830	Sorghum	plasma membrane	51.39	19.01
Os01t0155500-01	Rice	plasma membrane	54.18	18.7
HORVU3Hr1G024950.4	Barley	plasma membrane	54.18	18.58
Solyc10g054050.1.1	Tomato	plasma membrane	41.49	16.86
Solyc02g069970.2.1	Tomato	plasma membrane	33.13	16.02
Solyc02g014030.1.1	Tomato	plasma membrane	43.65	12.24

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:3.30.200.20	ProteinID:AAF76311.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF94	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	UniProt:Q9LLC7	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:Solyc05g013300.1	EnsemblPlants:Solyc05g013300.1.1	UniParc:UPI00000A8C77	:	:	:

Description

LescPth2 [Source:UniProtKB/TrEMBL;Acc:Q9LLC7]

Coordinates

chr5:-:6400973..6401944

Molecular Weight (calculated)

36530.8 Da

IEP (calculated)

5.843

GRAVY (calculated)

-0.235

Length

323 amino acids

Sequence
(BLAST)

001: MGTNYSKPTT SINDASNLSN RVPFESFRVP FVDLQEATNN FDDKFLIGVG IFGKVYRGVL RDGTKVALKR RKPESPQGIE EFRTEIEILS HCSHPHLVSL
101: IGYCDERNEM ILIYDYMENG NLSKRLYGSD LCLPTMSWEQ RLEICIGAAR GLHYLHNSAV IHRDVKSTNI LLDENFVAKI TDFGISKTTP EFDQTHLSTM
201: VQGSIGYIDP EYFIRGQLTK KSDVYSFGVV LFEVLCARPA IGRSHMISLA EWAVETQKMG QLEQIVDPTI VAKIRPESLR MFGETAVKCL ASSSENRPSM
301: GDVLWKLEYA LHLQEPIIQD NPE

Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)

001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR

Arabidopsis Description

HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.