CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 2
plasma membrane 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028686_P001	Maize	plasma membrane	86.48	88.72
Os03t0281500-01	Rice	plasma membrane	68.73	71.51
TraesCS4A01G102900.1	Wheat	plasma membrane	67.01	68.9
TraesCS4D01G202300.1	Wheat	plasma membrane	66.9	68.79
HORVU4Hr1G058220.1	Barley	plasma membrane	66.21	68.56
TraesCS4B01G201600.1	Wheat	plasma membrane	66.44	68.4
CDY49572	Canola	cytosol	22.34	66.55
Solyc06g005230.1.1	Tomato	plastid	27.72	64.71
PGSC0003DMT400043793	Potato	cytosol, plastid	22.22	60.06
Solyc05g013300.1.1	Tomato	cytosol	21.76	58.82
GSMUA_Achr11P...	Banana	cytosol	39.52	58.67
GSMUA_Achr9P04140_001	Banana	plasma membrane	37.8	57.79
KXG20506	Sorghum	plasma membrane	53.04	55.05
PGSC0003DMT400043784	Potato	cytosol	22.34	54.02
PGSC0003DMT400035099	Potato	cytosol	22.91	52.77
Bra033826.1-P	Field mustard	cytosol, plasma membrane, plastid	42.96	51.94
CDX99115	Canola	plasma membrane	48.34	51.65
KRH10340	Soybean	plasma membrane	43.64	51.42
VIT_06s0004g03920.t01	Wine grape	plasma membrane	48.22	51.4
EES17770	Sorghum	plasma membrane	49.03	51.26
KRH24985	Soybean	plasma membrane	49.03	51.13
CDX86076	Canola	plasma membrane	47.77	50.98
Bra018214.1-P	Field mustard	plasma membrane	48.57	50.9
PGSC0003DMT400025093	Potato	plasma membrane	48.11	50.66
KRG88684	Soybean	plasma membrane	46.96	50.55
GSMUA_Achr5P28470_001	Banana	plasma membrane	27.03	50.54
CDX68370	Canola	plasma membrane	47.31	50.37
CDX80236	Canola	plasma membrane	46.39	50.12
PGSC0003DMT400040185	Potato	plasma membrane	47.65	49.88
Solyc11g072910.1.1	Tomato	plasma membrane	47.54	49.76
CDX82981	Canola	plasma membrane	47.54	49.76
AT3G46290.1	Thale cress	plasma membrane	47.19	49.64
AT5G59700.1	Thale cress	plasma membrane	47.08	49.58
Bra002541.1-P	Field mustard	plasma membrane	46.85	49.34
VIT_13s0067g03780.t01	Wine grape	plasma membrane	45.93	48.49
Solyc05g054860.1.1	Tomato	plasma membrane	42.61	45.87
PGSC0003DMT400060442	Potato	plasma membrane	42.27	45.11
KXG37500	Sorghum	plasma membrane	42.38	43.79
CDY24966	Canola	plasma membrane	39.52	42.23
EER95602	Sorghum	plasma membrane	41.24	42.01
CDY07654	Canola	plasma membrane	39.29	41.88
AT2G39360.1	Thale cress	plasma membrane	38.95	41.72
Bra000130.1-P	Field mustard	plasma membrane	39.06	41.69
EER89103	Sorghum	plasma membrane	41.12	41.6
KXG31830	Sorghum	plasma membrane	41.12	41.12
OQU86611	Sorghum	cytosol	36.66	39.41
EER94913	Sorghum	plasma membrane	39.63	38.66
EES12876	Sorghum	plasma membrane	37.46	38.61
EES11497	Sorghum	plasma membrane	38.49	38.31
KXG34391	Sorghum	plasma membrane	37.11	38.25
OQU77260	Sorghum	plasma membrane	34.94	37.52
OQU81104	Sorghum	plasma membrane, vacuole	30.58	37.24
EES17952	Sorghum	plasma membrane	37.0	37.13

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:2.60.120.430	Gene3D:3.30.200.20	EntrezGene:8084901
UniProt:C5WP98	EnsemblPlants:EER95065	ProteinID:EER95065	ProteinID:EER95065.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Malectin-like_Carb-bd_dom
PFAM:PF07714	PFAM:PF12819	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF65	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3001G414000	SUPFAM:SSF56112
unigene:Sbi.4999	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A8305B
RefSeq:XP_002468067.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:69589901..69593241

Molecular Weight (calculated)

93453.6 Da

IEP (calculated)

8.296

GRAVY (calculated)

-0.035

Length

873 amino acids

Sequence
(BLAST)

001: MTPMGSCRGS SPTTSMAGPV LDMLLRVAVV LSALLPAARA AFTPADNYLV LCGTAANATV DGRTFLGDAS LPASVLSASR GSEANASAAG SATGSDDAAL
101: YQYARVFAAP SSYTFAITKP GRHFVRLHFF PFRYQSGDLA ADARFSVSVQ GLVLIDGYSP VNGTAVVREF SVNVAGGTLA IAFTPTPTPA GKVAFVNAIE
201: VVSHPDDLFG DAAQTVNPMG RYTGLSTLAL ETVHRVNMGS PKITPRNDTL GRTWLPDESF LVDSSVTVHK DVAPSTLRWT RGFATSETAP GMVYATATEI
301: NTTLMSASTI SVQFNMTWKL QATPGSAYLL RLHFCDIVSK AANVLVFNVY VGGWTVLPDY EISRDTFSVQ AVPLFKDFVL SAKDARGNIT VSIGTSTLGN
401: ADPDGILNGL EIMRMVGSTG GEGAASSEGG SKKITIAIAA GSAVAGVTVV MALALTVLMV RRRKKPEKKP SSTWAAFSAS ALGSRAHSRS FGNSNSSGAR
501: NNTITLGQSA GAGYRIPFAA LQEATCGFDE AMVIGVGGFG KVYKGTMRDE TLVAVKRGNR QSKQGLNEFR TEIELLSRLR HRHLVSLIGY CDERGEMILV
601: YEYMARGTLR SHLYDSELPP LSWKQRLDVC IGAARGLHYL HTGSAKAIIH RDVKSANILL DDSFMAKVAD FGLSKTGPEL DKTHVSTAVK GSFGYLDPEY
701: FRRQMLTDKS DVYSFGVVLL EVLCARPVID PTLPREMVNL AEWATQRLKN GELDSIVDQR IAGSIRPESL KKFVDTAEKC LAEYGVERPA MGDVLWCLEF
801: ALQLQEASLD SSGTKASPDS SGTDNTQLVL RNASRLHRNQ SNASDGAEAN LGDLDGMSMR RVFSKMIKSE EGR

Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)

001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR

Arabidopsis Description

HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.