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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d040269_P001 Maize plasma membrane 90.76 84.13
Zm00001d008347_P001 Maize plasma membrane 91.01 83.69
Os01t0253000-01 Rice plasma membrane 41.13 76.43
TraesCS3D01G178200.1 Wheat plasma membrane 78.94 72.92
TraesCS3A01G171500.1 Wheat plasma membrane 78.57 72.42
TraesCS3B01G202500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane, plastid 78.94 70.99
HORVU3Hr1G034670.3 Barley plastid 78.82 70.64
EES17952 Sorghum plasma membrane 68.97 64.37
VIT_05s0077g00970.t01 Wine grape plasma membrane 59.85 56.71
Solyc01g059910.2.1 Tomato plastid 53.69 56.48
GSMUA_Achr11P... Banana plasma membrane 46.06 54.92
GSMUA_Achr11P... Banana plasma membrane 48.28 54.14
VIT_07s0005g01640.t01 Wine grape plasma membrane 56.9 53.91
PGSC0003DMT400056220 Potato plasma membrane 54.8 52.11
Solyc07g008400.1.1 Tomato plasma membrane 54.68 51.99
CDY33885 Canola plasma membrane 53.45 51.61
KRG92692 Soybean plasma membrane 53.45 51.48
Bra020618.1-P Field mustard plasma membrane 53.69 51.05
CDY05602 Canola plasma membrane 53.57 50.94
KRG96984 Soybean plasma membrane 54.31 50.92
KRH68745 Soybean plasma membrane 54.31 50.75
Bra010006.1-P Field mustard plasma membrane 53.45 50.52
AT3G04690.1 Thale cress plasma membrane 52.83 50.47
CDX86206 Canola plasma membrane 53.33 50.41
KRH34099 Soybean plasma membrane 53.2 50.12
AT5G28680.1 Thale cress plasma membrane 52.71 49.88
Solyc06g009550.2.1 Tomato plasma membrane 44.21 49.45
PGSC0003DMT400018850 Potato plasma membrane 50.74 46.34
Solyc06g009540.1.1 Tomato plasma membrane 50.62 46.34
EER94913 Sorghum plasma membrane 50.74 46.03
CDY48660 Canola plasma membrane 32.14 44.62
EES11497 Sorghum plasma membrane 48.03 44.47
OQU77260 Sorghum plasma membrane 41.13 41.08
PGSC0003DMT400018829 Potato plasma membrane 50.0 40.72
EES17770 Sorghum plasma membrane 39.41 38.32
KXG20506 Sorghum plasma membrane 38.79 37.46
EER89103 Sorghum plasma membrane 39.66 37.31
KXG37500 Sorghum plasma membrane 38.79 37.28
EES12876 Sorghum plasma membrane 38.67 37.07
EER95065 Sorghum plasma membrane 39.41 36.66
KXG34391 Sorghum plasma membrane 36.82 35.3
EER95602 Sorghum plasma membrane 36.58 34.66
OQU81104 Sorghum plasma membrane, vacuole 29.56 33.47
KXG31830 Sorghum plasma membrane 33.5 31.16
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:2.60.120.430Gene3D:3.30.200.20UniProt:A0A1W0VWW9
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_domEnsemblPlants:OQU86611ProteinID:OQU86611ProteinID:OQU86611.1PFAM:PF07714
PFAM:PF12819ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27003PANTHER:PTHR27003:SF97
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3003G114600SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0009DC8568SEG:seg::
Description
hypothetical protein
Coordinates
chr3:-:10312530..10315351
Molecular Weight (calculated)
88839.3 Da
IEP (calculated)
6.637
GRAVY (calculated)
-0.213
Length
812 amino acids
Sequence
(BLAST)
001: MAADKVDNGL PSTIPYMTAR VFTTEAVYNF SVKPHDRHWV RLHFYPSSYN GIAAKGFHFS VSTSTGITLL RNFSVYTYTK ALTQAYVIRE FSLPPTPAGF
101: LTLTFTPTPM GNETYAFVNG IEVISMPDIF VDPAIMVGFA DQTVDIASST LETMYRFNVG GSYIPPSNDS GLTRNWYDDT PYVYGPTQGV TYRAGPHFQI
201: KYPSETAEYA APPEVYLGTR SMGSDPRLNQ NYNLTWTMPV DGNFTYVARL HFCELLLSRA NQRAFDIYVN NKTAQSDADV IGMTSEKGVP LYKDYAAYVS
301: QEPDGQSMWV ALHPSVALRP QFYDAILNGL EIFKLNDTAG NLAAPDPEPS RLLAKAEMGA GDHAAHKSKP HPHMARVMGG TAGGAAALGI VAAICVVWYH
401: EKKKREAAAS AGGSHASGWL PLYHSYTSNK SSGHLPANLA GMCRHFSFAD IKVATKNFSE SLVIGVGGFG KVYRGVVDGD TKVAIKRSNP SSEQGVHEFQ
501: TEVEMLSKLR HRHLVSLIGF CEDAGEMILV YDYMEHGTLR EHLYMGGKPP LSWRKRLDIC IGAARGLHYL HTGAKYTIIH RDVKTTNILV DGDWVAKVSD
601: FGLSKSGPTT MNQTHVSTMV KGSFGYLDPE YFRRQQLTDK SDVYSFGVVL FEVLLARPAL DPALPREKVS LADYALSCQR NGTLMDVIDP AIKDQIAPEC
701: FKKIADTAEK CLAEMSIERP SMGDVLWNLE FALQLQDTFE GGSSGRRTVG DGSGTGRAAL EPSNSNGSTA SVTTLGTSST SRAHEACVIM EETDDEVANS
801: AAFSQLVCPT GR
Best Arabidopsis Sequence Match ( AT3G04690.1 )
(BLAST)
001: MSGKTRILFF LTCLSFLLVF PTRSNGQDLA LSCGTSEASA DQDKKKWEPD TKFLKTGNSI HATATYQDPS LLSTVPYMTA RIFTAPATYE IPIKGDKRHL
101: LRLYFYPSTY TGLNISNSYF TVEANDVTLL SNFSAAITCQ ALTQAYLVKE YSLAPTDKDV LSIKFTPSDK YRDAFAFING IEVIQMPELF DTAALVGFTD
201: QTMDAKTANL QSMFRLNVGG QDIPGSQDSG GLTRTWYNDA PYIFSAGLGV TLQASNNFRI NYQNMPVSIA PADIYKTARS QGPNGDINLK SNLTWMFQID
301: KNFTYILRLH FCEFQLSKIN QKVFNIYINN RTAQADTTPA DIIGWTGEKG IPMYKDYAIY VDANNGGEEI TLQMTPSTFG QPEYYDSSLN GLEIFKMDTM
401: KNLAGPNPEP SPMQAEEEVK KEFKNEKRHA FIIGSAGGVL AVLIGALCFT AYKKKQGYQG GDSHTSSWLP IYGNSTTSGT KSTISGKSNN GSHLSNLAAG
501: LCRRFSLPEI KHGTQNFDDS NVIGVGGFGK VYKGVIDGTT KVAVKKSNPN SEQGLNEFET EIELLSRLRH KHLVSLIGYC DEGGEMCLVY DYMAFGTLRE
601: HLYNTKKPQL TWKRRLEIAI GAARGLHYLH TGAKYTIIHR DVKTTNILVD ENWVAKVSDF GLSKTGPNMN GGHVTTVVKG SFGYLDPEYF RRQQLTEKSD
701: VYSFGVVLFE ILCARPALNP SLPKEQVSLG DWAMNCKRKG NLEDIIDPNL KGKINAECLK KFADTAEKCL NDSGLERPTM GDVLWNLEFA LQLQETADGT
801: RHRTPNNGGS SEDLGRGGMA VNVAGRDDVS DLSSEDNTEI FSQIVNPKGR
Arabidopsis Description
ANX1ANX1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHY9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.