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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • plastid 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027436_P001 Maize mitochondrion 82.61 88.39
Os03t0124200-01 Rice plasma membrane 68.14 68.87
TraesCS4B01G345400.1 Wheat plasma membrane 69.43 68.47
TraesCS5A01G514500.1 Wheat plasma membrane 69.43 68.16
TraesCS4D01G340500.1 Wheat plasma membrane 68.73 67.55
HORVU4Hr1G084510.2 Barley plasma membrane 68.14 66.9
TraesCS2B01G536700.1 Wheat plasma membrane 48.31 65.71
TraesCS2D01G509800.1 Wheat plasma membrane 61.03 63.63
TraesCS4B01G367000.1 Wheat plasma membrane 61.03 62.41
HORVU2Hr1G113120.1 Barley plasma membrane 59.63 61.86
HORVU4Hr1G087720.1 Barley plasma membrane, plastid 57.99 57.19
VIT_07s0129g00950.t01 Wine grape cytosol 22.52 55.78
Solyc03g059070.2.1 Tomato plasma membrane 29.29 52.51
VIT_00s1542g00010.t01 Wine grape plasma membrane 26.95 52.14
VIT_00s1542g00020.t01 Wine grape plasma membrane 24.04 50.0
GSMUA_Achr11P... Banana plasma membrane 39.91 49.07
KRG99398 Soybean mitochondrion, plasma membrane 23.45 48.43
Bra009722.1-P Field mustard cytosol, plasma membrane, plastid 31.04 48.1
GSMUA_Achr8P12240_001 Banana vacuole 35.24 47.41
CDY46084 Canola mitochondrion, plasma membrane, plastid 28.0 43.24
AT5G24010.1 Thale cress plasma membrane 41.54 43.2
PGSC0003DMT400067688 Potato plasma membrane 41.19 43.15
KRH08877 Soybean plasma membrane 38.86 43.08
VIT_16s0050g01020.t01 Wine grape plastid 38.74 42.84
CDX80402 Canola plasma membrane 41.07 42.41
CDX88063 Canola plasma membrane 40.96 42.34
KXG20506 Sorghum plasma membrane 41.42 42.21
EES17770 Sorghum plasma membrane 40.96 42.04
KRH38391 Soybean plasma membrane 39.79 41.69
KRH35245 Soybean plasma membrane 39.79 41.28
EER95065 Sorghum plasma membrane 42.01 41.24
VIT_07s0129g00970.t01 Wine grape plasma membrane 40.49 41.21
VIT_07s0129g00960.t01 Wine grape plasma membrane 39.67 40.96
KRH04510 Soybean mitochondrion, plasma membrane 40.26 40.93
KRG91576 Soybean plastid 39.91 40.71
KXG37500 Sorghum plasma membrane 40.02 40.59
VIT_07s0129g00990.t01 Wine grape plasma membrane 39.67 40.52
VIT_07s0129g00870.t01 Wine grape plasma membrane 38.97 40.24
VIT_07s0129g00910.t01 Wine grape plasma membrane 38.86 40.02
VIT_07s0129g00880.t01 Wine grape plasma membrane 38.62 39.93
AT2G23200.1 Thale cress plasma membrane 38.39 39.45
CDX76865 Canola plasma membrane 37.22 39.38
KRH58006 Soybean plasma membrane 38.39 39.26
VIT_07s0129g00890.t01 Wine grape plasma membrane 32.56 39.02
Bra039190.1-P Field mustard plasma membrane 37.46 38.49
Solyc03g044160.1.1 Tomato plasma membrane 36.29 38.07
CDY21480 Canola plasma membrane 37.22 38.02
PGSC0003DMT400038535 Potato plasma membrane 35.82 37.53
VIT_07s0129g00920.t01 Wine grape cytosol, mitochondrion, plasma membrane, vacuole 37.81 37.46
EES12876 Sorghum plasma membrane 36.76 37.19
EES11497 Sorghum plasma membrane 38.04 37.17
EER89103 Sorghum plasma membrane 37.22 36.96
KXG34391 Sorghum plasma membrane 36.52 36.95
EER94913 Sorghum plasma membrane 38.39 36.76
OQU86611 Sorghum cytosol 34.66 36.58
KRH58005 Soybean plasma membrane 33.84 36.57
KXG31830 Sorghum plasma membrane 37.22 36.54
OQU77260 Sorghum plasma membrane 34.31 36.16
EES17952 Sorghum plasma membrane 36.29 35.75
OQU81104 Sorghum plasma membrane, vacuole 29.75 35.56
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:3.30.200.20EntrezGene:8061458UniProt:C5X026
EnsemblPlants:EER95602ProteinID:EER95602ProteinID:EER95602.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009506GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_domPFAM:PF07714PFAM:PF12819ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27003PANTHER:PTHR27003:SF41InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
EnsemblPlantsGene:SORBI_3001G525500SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-TMTMHMM:TMhelix
UniParc:UPI0001A831D7RefSeq:XP_002468604.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr1:-:78963426..78965999
Molecular Weight (calculated)
92502.4 Da
IEP (calculated)
6.091
GRAVY (calculated)
-0.015
Length
857 amino acids
Sequence
(BLAST)
001: MAVLVLVLVL LATFLPSTAL AAFSPAFSFF LACGAGSTVT FPRDSPARNF TPDDGYLTTK SVPAVTNANP NSVASPLYDA ARASSSAFSY RFPVPDSAGQ
101: QAAFFVLRLH FFPFSPASPS TVSLSSARFA VSVQDAYTLL SSFSPPNAGV VKEFFVPAGG SGDFSVTFTP ASGSAAFINA VELFPAPAEL LWNGSVTPVG
201: VGAAALNIAA WPKDALETVY RLNVGGPEVT KENDTLWRTW LPDDPFLFGP AGSSMLQNTT TQIVYATYTK ELAPDVVYKT QRAANVSAAG AGAVPPRFNV
301: TWTFSAEPGS NYLVRLHFCD YELLSSVVAV VSVFNVFVAQ SMGTQDFTPT QFETQANTAL YMDYAATAPI SGNLTVSIGM SAKSGTGEGG FLNGLEIMKV
401: RPSDSSLAAG SHGSRNKRVL ITALSAVLGA SVLASAALCL FFVVRRKRRM ARAAPLEKES SKPLPWSQES SGWVLEPSSR SGEGTTGAMQ RVSTQLHIPL
501: EELRSATDNF HERNLIGVGG FGNVYRGALR DGTRVAVKRA TRASKQGLPE FQTEIVVLSR IRHRHLVSLI GYCNEQAEMI LVYEYMEKGT LRSHLYGPDS
601: DGAAAPLSWK QRLEVCIGAA RGLHYLHTGY SENIIHRDVK STNILLGDGF IAKVADFGLS RIGPSFGETH VSTAVKGSFG YLDPEYFKTQ QLTDRSDVYS
701: FGVVLFEVLC ARPVIDQALE RDQINLAEWA VGWQRRGQLD RIADPRILGE VNENSLRKFA ETAERCLADY GQERPSMADV LWNLEYCLQL QETHVRRDAF
801: EDSGAVGAQF PEDVVVPRWV PSSTSFMTTG DPDDTAVTDV GVVNSKVFSQ LSSGEGR
Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)
001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR
Arabidopsis Description
HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.