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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • plastid 1
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:cytosol, nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER95602 Sorghum plasma membrane 68.87 68.14
TraesCS2B01G536700.1 Wheat plasma membrane 49.65 66.83
Zm00001d027436_P001 Maize mitochondrion 63.09 66.79
HORVU4Hr1G084510.2 Barley plasma membrane 68.63 66.67
TraesCS4B01G345400.1 Wheat plasma membrane 68.16 66.51
TraesCS5A01G514500.1 Wheat plasma membrane 67.81 65.86
TraesCS4D01G340500.1 Wheat plasma membrane 67.57 65.71
TraesCS2D01G509800.1 Wheat plasma membrane 62.38 64.36
HORVU2Hr1G113120.1 Barley plasma membrane 59.55 61.14
TraesCS4B01G367000.1 Wheat plasma membrane 60.26 60.98
HORVU4Hr1G087720.1 Barley plasma membrane, plastid 60.02 58.57
VIT_07s0129g00950.t01 Wine grape cytosol 23.47 57.51
Os10t0534500-01 Rice plasma membrane 56.37 56.64
VIT_00s1542g00010.t01 Wine grape plasma membrane 27.48 52.6
Solyc03g059070.2.1 Tomato plasma membrane 28.66 50.84
VIT_00s1542g00020.t01 Wine grape plasma membrane 24.53 50.49
KRG99398 Soybean mitochondrion, plasma membrane 24.17 49.4
GSMUA_Achr8P12240_001 Banana vacuole 36.56 48.67
Bra009722.1-P Field mustard cytosol, plasma membrane, plastid 31.6 48.46
GSMUA_Achr11P... Banana plasma membrane 39.5 48.06
KRH08877 Soybean plasma membrane 40.92 44.89
VIT_16s0050g01020.t01 Wine grape plastid 40.68 44.52
Os01t0253000-01 Rice plasma membrane 22.88 44.39
CDX88063 Canola plasma membrane 43.04 44.03
CDX80402 Canola plasma membrane 42.92 43.86
KRH38391 Soybean plasma membrane 41.63 43.15
CDY46084 Canola mitochondrion, plasma membrane, plastid 27.95 42.7
PGSC0003DMT400067688 Potato plasma membrane 41.16 42.66
AT5G24010.1 Thale cress plasma membrane 41.39 42.6
KRG91576 Soybean plastid 41.98 42.38
KRH35245 Soybean plasma membrane 41.27 42.37
Os03t0281500-01 Rice plasma membrane 41.51 41.95
VIT_07s0129g00990.t01 Wine grape plasma membrane 40.92 41.36
VIT_07s0129g00970.t01 Wine grape plasma membrane 40.92 41.21
VIT_07s0129g00960.t01 Wine grape plasma membrane 40.21 41.08
Os06t0334300-01 Rice plasma membrane 41.04 40.51
KRH04510 Soybean mitochondrion, plasma membrane 40.09 40.33
VIT_07s0129g00910.t01 Wine grape plasma membrane 39.03 39.78
VIT_07s0129g00880.t01 Wine grape plasma membrane 38.8 39.69
VIT_07s0129g00870.t01 Wine grape plasma membrane 38.68 39.52
Solyc03g044160.1.1 Tomato plasma membrane 37.85 39.29
AT2G23200.1 Thale cress plasma membrane 38.33 38.97
VIT_07s0129g00890.t01 Wine grape plasma membrane 32.78 38.88
PGSC0003DMT400038535 Potato plasma membrane 37.5 38.88
Os04t0619600-01 Rice plasma membrane 38.44 38.63
KRH58006 Soybean plasma membrane 38.09 38.54
CDX76865 Canola plasma membrane 36.79 38.52
Os06t0126250-01 Rice plasma membrane 38.33 38.46
Os03t0759600-00 Rice plasma membrane, plastid 40.33 38.34
VIT_07s0129g00920.t01 Wine grape cytosol, mitochondrion, plasma membrane, vacuole 38.21 37.46
Bra039190.1-P Field mustard plasma membrane 36.79 37.41
CDY21480 Canola plasma membrane 36.91 37.31
Os05t0318700-02 Rice plasma membrane 37.97 36.55
Os07t0147600-01 Rice plasma membrane 36.44 36.4
Os05t0280700-01 Rice plasma membrane 37.26 36.36
KRH58005 Soybean plasma membrane 33.73 36.07
Os01t0769700-01 Rice plasma membrane 37.74 35.71
Os03t0333200-01 Rice plasma membrane 37.15 35.27
Os01t0155500-01 Rice plasma membrane 38.21 34.62
Os05t0317900-01 Rice plasma membrane 34.08 34.16
Os05t0317700-01 Rice plasma membrane 33.73 34.01
Os01t0253100-01 Rice plasma membrane 24.06 28.81
Os05t0318600-01 Rice plasma membrane 18.99 28.55
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:3.30.200.20ProteinID:ABF93734.1ProteinID:BAF10724.1
ProteinID:BAS82059.1ProteinID:EAZ25417.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_domEnsemblPlantsGene:Os03g0124200
EnsemblPlants:Os03t0124200-01PFAM:PF07714PFAM:PF12819ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27003PANTHER:PTHR27003:SF41InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q10SF5SMART:SM00220
SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0000DB40C6
SEG:seg:::::
Description
Catharanthus roseus receptor-like kinase1-like kinase 6Similar to Pto-like protein kinase F. (Os03t0124200-01);Similar to Protein kinase domain containing protein, expressed. (Os03t0124200-02)
Coordinates
chr3:+:1406065..1408788
Molecular Weight (calculated)
91898.8 Da
IEP (calculated)
5.958
GRAVY (calculated)
-0.076
Length
848 amino acids
Sequence
(BLAST)
001: MATVIVILLL LPLLPSTALA AFPYFLACGA ASNVSFPGDS PARTFVPDAP FLSSAGRVPA VTSTGSNTIP PLYAAARAAG SGFSYSFADP DTATVNVSRV
101: LRLHFFPFTS SSSVNLSSAS FSVSVRDAYT LLSSFSPPRD GVVKEYFVPG DGSGEFRVKF TPDAGSTAFV SAIELFPAPP ELLWRRPVKP VGALVDSVDV
201: NAWPQQALET VYRLNVGGSK VTAANDTLWR TWLPDDPYFS SPRGLSQVNS TSTPIIYGTS IGYTREVAPD SVYKTQRAMN MASQQLFLTP GPFNLTWTFA
301: LPPPAPGSDS DYLVRLHWCD YSLVSSVVAT GIVFDVYVAQ RLASKDLDRN AADAAEQPNE AFYLDYAATA PTTGNLTISI GKSDKSDAGG MLNGLEIMKL
401: RRADNLNSAG SHGRRKKILI GTLSAALGVA VLACALLCLL AVLRRRRQAP TPAPEEKEST QLPWSQHTQD GSSWVDMSNA SGAGMTGGLH RMSMQLNISL
501: ADITAATENF NERNLIGVGG FGNVYSGVLR DGTRVAVKRA MRASKQGLPE FQTEIEVLSR IRHRHLVSLI GYCNEQSEMI LVYEYMEKGT LRSHLYGSEE
601: PPLSWKQRLE ICIGAARGLH YLHTGYSENI IHRDVKSTNI LLGDAFIAKV ADFGLSRIGP SFGETHVSTA VKGSFGYLDP EYFKTQQLTD RSDVYSFGVV
701: LFEVLCARTV IDQSLERDEI NLAEWAVSLQ QKGELAKITD PRIAGQVNGN SLRKFAETAE KCLADYGLDR PSMGDVLWNL EYCLQLQETH VNRDAFEDSG
801: AVATQFPADV VVPRWVPSST SFLMDDSVTD SGIANSKAFS QLSSGDGR
Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)
001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR
Arabidopsis Description
HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.