Factsheet for VIT_00s1542g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 2
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s1542g00020.t01	Wine grape	plasma membrane	88.26	94.9
VIT_07s0129g00950.t01	Wine grape	cytosol	53.05	67.92
VIT_08s0040g00010.t01	Wine grape	mitochondrion	48.08	49.42
VIT_07s0129g00990.t01	Wine grape	plasma membrane	92.33	48.75
VIT_07s0129g00970.t01	Wine grape	plasma membrane	90.29	47.51
VIT_17s0000g06620.t01	Wine grape	plasma membrane	52.14	44.51
CDY46084	Canola	mitochondrion, plasma membrane, plastid	50.56	40.36
VIT_07s0129g00890.t01	Wine grape	plasma membrane	61.85	38.32
TraesCS2B01G536700.1	Wheat	plasma membrane	49.66	34.92
VIT_07s0129g00960.t01	Wine grape	plasma membrane	63.43	33.86
KRH04510	Soybean	mitochondrion, plasma membrane	64.11	33.69
VIT_07s0129g00870.t01	Wine grape	plasma membrane	60.72	32.41
VIT_16s0050g01020.t01	Wine grape	plastid	56.66	32.39
VIT_07s0129g00910.t01	Wine grape	plasma membrane	60.5	32.21
VIT_07s0129g00880.t01	Wine grape	plasma membrane	60.05	32.09
VIT_07s0129g00920.t01	Wine grape	cytosol, mitochondrion, plasma membrane, vacuole	61.63	31.56
VIT_01s0244g00090.t01	Wine grape	plastid	39.73	31.26
KRH58006	Soybean	plasma membrane	56.88	30.07
KRH58005	Soybean	plasma membrane	52.82	29.51
Zm00001d027436_P001	Maize	mitochondrion	52.82	29.21
VIT_19s0014g03400.t01	Wine grape	plasma membrane	54.85	29.03
GSMUA_Achr11P...	Banana	plasma membrane	44.7	28.41
VIT_06s0004g03920.t01	Wine grape	plasma membrane	52.14	28.21
GSMUA_Achr8P12240_001	Banana	vacuole	40.18	27.94
Os03t0124200-01	Rice	plasma membrane	52.6	27.48
CDX76865	Canola	plasma membrane	50.11	27.41
Bra039190.1-P	Field mustard	plasma membrane	51.02	27.1
TraesCS4B01G345400.1	Wheat	plasma membrane	53.05	27.04
VIT_13s0067g03780.t01	Wine grape	plasma membrane	50.34	26.96
EER95602	Sorghum	plasma membrane	52.14	26.95
VIT_03s0038g04340.t01	Wine grape	plasma membrane	51.47	26.95
HORVU4Hr1G084510.2	Barley	plasma membrane	53.05	26.92
TraesCS2D01G509800.1	Wheat	plasma membrane	49.66	26.76
CDY21480	Canola	plasma membrane	50.56	26.7
TraesCS4D01G340500.1	Wheat	plasma membrane	52.37	26.61
Os10t0534500-01	Rice	plasma membrane	50.56	26.54
AT2G23200.1	Thale cress	plasma membrane	49.66	26.38
TraesCS5A01G514500.1	Wheat	plasma membrane	51.92	26.35
VIT_05s0077g00970.t01	Wine grape	plasma membrane	50.11	25.9
TraesCS4B01G367000.1	Wheat	plasma membrane	48.76	25.78
VIT_07s0005g01640.t01	Wine grape	plasma membrane	49.66	25.67
HORVU2Hr1G113120.1	Barley	plasma membrane	47.86	25.67
VIT_10s0003g04990.t01	Wine grape	plasma membrane	48.31	25.36
HORVU4Hr1G087720.1	Barley	plasma membrane, plastid	48.31	24.63
VIT_14s0083g01210.t01	Wine grape	cytosol	43.34	23.08
VIT_14s0068g00010.t01	Wine grape	cytosol	44.24	22.55
VIT_14s0068g00030.t01	Wine grape	plasma membrane	44.24	21.97
VIT_01s0011g00280.t01	Wine grape	plasma membrane	42.44	21.61
VIT_14s0068g00090.t01	Wine grape	plasma membrane	40.18	20.63

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:3.30.200.20	EMBL:AM458839	ProteinID:CAN74535
ProteinID:CAN74535.1	ProteinID:CCB54179	ProteinID:CCB54179.1	UniProt:F6HJU1	EMBL:FN595842	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF59	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00021098D9	ArrayExpress:VIT_00s1542g00010
EnsemblPlantsGene:VIT_00s1542g00010	EnsemblPlants:VIT_00s1542g00010.t01	unigene:Vvi.25018	RefSeq:XP_003635588	RefSeq:XP_003635588.1	SEG:seg

Description

No Description!

Coordinates

chrUn:+:39528363..39529926

Molecular Weight (calculated)

49478.6 Da

IEP (calculated)

7.162

GRAVY (calculated)

-0.234

Length

443 amino acids

Sequence
(BLAST)

001: MEELGWVSME NESKKKTTPL LVGLVVGGLA LVCIVIVVLL LRSKCRKEKP AEASHWLPVT VDGGLSSHSR VYEATIHGSP VPYLNLGLKM PLAEIQSATN
101: NFSSKLLVGK GGFGKVYQGT LRNGMKVAVK RSQPGHGQGL PEFQTEILVL SKIRHRHLVS LIGYCDERNE MILVYEFMQK GTLRSHLYDS DLPCLSWKQR
201: LEICIGAARG LHYLHTSSEG GIIHRDIKST NILLDDNFVA KVADFGLSRS GLPHQTHVST AVKGTFGYLD PEYFRTQQLT DKSDVYSFGV VLLEVLCARP
301: AINPSLPREQ MNLAEWVMVW QKKGLLEQVI DPLLVGKVNL NSLRKFGETV EKCLKEDGTD RPTMGDVMWD LEYAFQLQQT AMQREPLEDS TNDAASTFPL
401: PTIQRYPSYS FSISDIHGPQ RRDGSSETTE SEVFSQLRID DGR

Best Arabidopsis Sequence Match ( AT2G23200.1 )
(BLAST)

001: MENFCFQDSV SLFITIMVLV LLPRLSLSDT STYTRPENFY VNCGSDSNVF YGGQTFVGDT NSSTNSVSFT NKGTEVINDQ SSVAPEIYRT VRIFRHPSSY
101: KFKLDSLGLH FVRLHFSVVF SRADLLTARF TVSATSGSNH HLKSFSPQNL TNTPRVEEFL LMMNSLEFEI RFVPDHSSLA LINAIEVFSA PDDLEIPSAS
201: DKNLHTIYRL NVGGEKITPD NDTLGRTWLP DDDDFLYRKD SARNINSTQT PNYVGGLSSA TDSTAPDFVY KTAKAMNRSS NEQVGMLMNV TWSFKVKSNH
301: RHFIRIHFSD ILSNLSNSDS DFYLFVNGYW RVDVKPSEQP RLASPFFKDV VNVSDGSGLL NISIGTKEAN KDAGFLNGLE MMEVLSKSGS DYSNRSSSRV
401: HIITGCAVAA AAASALVFSL LFMVFLKRRR SKKTKPEVEG TVWSPLPLHR GGSSDNRPIS QYHNSPLRNL HLGLTIPFTD ILSATNNFDE QLLIGKGGFG
501: YVYKAILPDG TKAAIKRGKT GSGQGILEFQ TEIQVLSRIR HRHLVSLTGY CEENSEMILV YEFMEKGTLK EHLYGSNLPS LTWKQRLEIC IGAARGLDYL
601: HSSGSEGAII HRDVKSTNIL LDEHNIAKVA DFGLSKIHNQ DESNISINIK GTFGYLDPEY LQTHKLTEKS DVYAFGVVLL EVLFARPAID PYLPHEEVNL
701: SEWVMFCKSK GTIDEILDPS LIGQIETNSL KKFMEIAEKC LKEYGDERPS MRDVIWDLEY VLQLQMMTNR REAHEEDSTA INSGGSLVAP RLMVSDSFST
801: NSIFQNGDES KNRFGFTDSS ETRVFSQLKI SDAR

Arabidopsis Description

Probable receptor-like protein kinase At2g23200 [Source:UniProtKB/Swiss-Prot;Acc:O22187]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.