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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • plastid 2
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:cytosol, nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G536700.1 Wheat plasma membrane 68.16 89.37
TraesCS2D01G509800.1 Wheat plasma membrane 86.68 87.1
HORVU4Hr1G084510.2 Barley plasma membrane 71.31 67.47
HORVU4Hr1G087720.1 Barley plasma membrane, plastid 70.46 66.97
EER95602 Sorghum plasma membrane 61.86 59.63
Os03t0124200-01 Rice plasma membrane 61.14 59.55
Zm00001d027436_P001 Maize mitochondrion 56.9 58.68
VIT_07s0129g00950.t01 Wine grape cytosol 21.79 52.02
Solyc03g059070.2.1 Tomato plasma membrane 28.09 48.54
VIT_00s1542g00010.t01 Wine grape plasma membrane 25.67 47.86
VIT_00s1542g00020.t01 Wine grape plasma membrane 22.88 45.87
Bra009722.1-P Field mustard cytosol, plasma membrane, plastid 29.3 43.76
GSMUA_Achr11P... Banana plasma membrane 36.92 43.76
KRG99398 Soybean mitochondrion, plasma membrane 21.43 42.65
GSMUA_Achr8P12240_001 Banana vacuole 32.81 42.54
KRH08877 Soybean plasma membrane 39.35 42.04
PGSC0003DMT400067688 Potato plasma membrane 41.16 41.56
VIT_16s0050g01020.t01 Wine grape plastid 38.86 41.42
CDX88063 Canola plasma membrane 40.68 40.53
CDX80402 Canola plasma membrane 40.31 40.12
KRH35245 Soybean plasma membrane 39.95 39.95
AT5G24010.1 Thale cress plasma membrane 39.71 39.81
KRG91576 Soybean plastid 40.31 39.64
HORVU1Hr1G024070.1 Barley plasma membrane 40.07 39.36
KRH38391 Soybean plasma membrane 38.74 39.12
CDY46084 Canola mitochondrion, plasma membrane, plastid 26.27 39.1
VIT_07s0129g00990.t01 Wine grape plasma membrane 39.35 38.74
VIT_07s0129g00970.t01 Wine grape plasma membrane 39.1 38.36
HORVU2Hr1G013080.1 Barley plasma membrane 38.01 38.06
KRH04510 Soybean mitochondrion, plasma membrane 38.62 37.84
HORVU4Hr1G058220.1 Barley plasma membrane 38.5 37.72
HORVU7Hr1G081590.1 Barley plasma membrane, plastid 38.98 37.62
VIT_07s0129g00960.t01 Wine grape plasma membrane 37.77 37.59
Solyc03g044160.1.1 Tomato plasma membrane 36.8 37.21
KRH58006 Soybean plasma membrane 37.65 37.11
HORVU5Hr1G096860.2 Barley mitochondrion 38.14 36.67
VIT_07s0129g00910.t01 Wine grape plasma membrane 36.8 36.54
VIT_07s0129g00870.t01 Wine grape plasma membrane 36.68 36.51
VIT_07s0129g00880.t01 Wine grape plasma membrane 36.56 36.43
PGSC0003DMT400038535 Potato plasma membrane 35.96 36.31
CDX76865 Canola plasma membrane 35.47 36.17
HORVU2Hr1G103780.1 Barley plasma membrane 36.8 35.98
HORVU7Hr1G010130.1 Barley plasma membrane 36.68 35.9
VIT_07s0129g00890.t01 Wine grape plasma membrane 30.75 35.52
HORVU4Hr1G050700.2 Barley plasma membrane 38.01 35.28
AT2G23200.1 Thale cress plasma membrane 35.59 35.25
Bra039190.1-P Field mustard plasma membrane 35.59 35.25
CDY21480 Canola plasma membrane 35.71 35.16
HORVU2Hr1G038950.5 Barley plasma membrane, vacuole 35.47 35.01
HORVU1Hr1G088680.1 Barley plasma membrane 34.75 34.79
HORVU1Hr1G059300.1 Barley plasma membrane 37.41 34.68
VIT_07s0129g00920.t01 Wine grape cytosol, mitochondrion, plasma membrane, vacuole 35.84 34.22
KRH58005 Soybean plasma membrane 31.72 33.04
HORVU5Hr1G084100.1 Barley plasma membrane 35.35 32.99
HORVU3Hr1G111040.1 Barley plasma membrane 33.29 32.93
HORVU4Hr1G000730.1 Barley plasma membrane 35.47 32.88
HORVU3Hr1G086590.1 Barley plasma membrane 35.59 32.52
HORVU3Hr1G034670.3 Barley plastid 34.99 31.9
HORVU4Hr1G000420.24 Barley cytosol, mitochondrion, plasma membrane, plastid 33.41 31.51
HORVU3Hr1G024950.4 Barley plasma membrane 35.59 31.21
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:3.30.200.20GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016301
GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:HORVU2Hr1G113120EnsemblPlants:HORVU2Hr1G113120.1InterPro:IPR000719InterPro:Kinase-like_dom_sf
UniProt:M0Y581InterPro:Malectin-like_Carb-bd_domPFAM:PF07714PFAM:PF12819ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27003PANTHER:PTHR27003:SF41InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002960B7C
SEG:seg:::::
Description
No Description!
Coordinates
chrchr2H:+:727406473..727409503
Molecular Weight (calculated)
90534.2 Da
IEP (calculated)
6.371
GRAVY (calculated)
0.011
Length
826 amino acids
Sequence
(BLAST)
001: MAVHGRLLVL LLATVLPRAA LAALSPGFQF QFFLACGANY SVSFPSNDFP TNTFVPDDAY LSPASAPAVS ARFTPYSRPA LHAAARADIS AFSYRFPSPA
101: SPYTPPFVVL RLHFFPFFQA TSSQYVINIF SARFNVSVSG HEYALMSSFS PPVNGAVKEF FVPRDLSGGD FHVTFTPDAG SSAFVNAIEL FSAPLEMLWC
201: GSVTPVGAVV KDDMDLWQRQ PLETVYRLNV GGPEVTIEND TLWRTWLPDG PYLYDARGKS VVSNTSSPII YDTSNGYTRE VAPDVVYQTQ RMANVTDWLL
301: ATTPGLNFNL TWTFPAVKGS RYLVRLHFCD YEVVSSVVGV SIVFNVYIAQ AIGTPDLMPN DRATVSNKAF YMDYAAKAPS TGNLTVSIGL VLKSNGGGIL
401: NGLEIMRLPP VDLSSRRSNG QTKRTVLITV AVVLGAAVLA CVALCLFGVP YTKYSASGWA EQWTNRWFGE GETSGMESVS RKLHIPLAKI KAATDSFHER
501: NLIGVGGFGN VYKGVLSDGT PVAVKRAMRA SQQGLPKFQT EIVVLSGIRH QHLVSLIGYC NEQAEMILVY EYMEKGTLRS HLYGSDEPAL SWKQRLEICI
601: GAARGLHYLH RGYAENIIHR DVKSTNILLG SDGGSTGGVI TKVADFGLSR IGPSFGETHV STAVKGSFGY LDPGYFKTQQ LTDRSDVYSF GVVLLEVLCA
701: RPVIDQSLDH SMINIAEWAM RMRREGRLDK MADPRIAGEV DEESLLKFVE TAEKCLADCW VDRPSMGDVL WNLEYCMQLQ EMNVIGDEHD NMVPSSTSLL
801: LDDTGLSMTN VADNKVSPAR ARDEAR
Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)
001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR
Arabidopsis Description
HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.