Factsheet for VIT_16s0050g01020.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2
mitochondrion 2
plasma membrane 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009722.1-P	Field mustard	cytosol, plasma membrane, plastid	49.68	69.62
KRG99398	Soybean	mitochondrion, plasma membrane	37.03	69.16
Solyc03g059070.2.1	Tomato	plasma membrane	40.77	66.11
KRH08877	Soybean	plasma membrane	65.94	66.11
KRH38391	Soybean	plasma membrane	68.26	64.67
KRH35245	Soybean	plasma membrane	67.61	63.44
KRG91576	Soybean	plastid	67.61	62.38
PGSC0003DMT400067688	Potato	plasma membrane	65.55	62.1
CDX88063	Canola	plasma membrane	65.42	61.16
CDX80402	Canola	plasma membrane	65.16	60.84
AT5G24010.1	Thale cress	plasma membrane	64.13	60.32
VIT_07s0129g00950.t01	Wine grape	cytosol	26.58	59.54
VIT_00s1542g00010.t01	Wine grape	plasma membrane	32.39	56.66
VIT_00s1542g00020.t01	Wine grape	plasma membrane	29.42	55.34
VIT_17s0000g06620.t01	Wine grape	plasma membrane	34.58	51.64
VIT_08s0040g00010.t01	Wine grape	mitochondrion	28.13	50.58
VIT_07s0129g00970.t01	Wine grape	plasma membrane	50.71	46.67
TraesCS2B01G536700.1	Wheat	plasma membrane	37.68	46.35
VIT_06s0004g03920.t01	Wine grape	plasma membrane	48.77	46.15
VIT_07s0129g00990.t01	Wine grape	plasma membrane	49.42	45.65
VIT_07s0129g00960.t01	Wine grape	plasma membrane	48.77	45.54
VIT_19s0014g03400.t01	Wine grape	plasma membrane	49.16	45.52
VIT_13s0067g03780.t01	Wine grape	plasma membrane	46.97	44.01
VIT_03s0038g04340.t01	Wine grape	plasma membrane	48.0	43.97
GSMUA_Achr11P...	Banana	plasma membrane	39.1	43.47
VIT_07s0129g00890.t01	Wine grape	plasma membrane	39.87	43.22
GSMUA_Achr8P12240_001	Banana	vacuole	34.97	42.54
VIT_07s0129g00880.t01	Wine grape	plasma membrane	45.03	42.1
VIT_07s0129g00870.t01	Wine grape	plasma membrane	44.77	41.81
VIT_07s0129g00910.t01	Wine grape	plasma membrane	44.39	41.35
Os03t0124200-01	Rice	plasma membrane	44.52	40.68
TraesCS2D01G509800.1	Wheat	plasma membrane	42.84	40.39
HORVU4Hr1G084510.2	Barley	plasma membrane	44.77	39.75
TraesCS5A01G514500.1	Wheat	plasma membrane	44.65	39.63
VIT_01s0244g00090.t01	Wine grape	plastid	28.77	39.61
VIT_07s0129g00920.t01	Wine grape	cytosol, mitochondrion, plasma membrane, vacuole	44.13	39.54
TraesCS4B01G345400.1	Wheat	plasma membrane	44.13	39.36
TraesCS4D01G340500.1	Wheat	plasma membrane	44.0	39.11
VIT_10s0003g04990.t01	Wine grape	plasma membrane	42.45	38.98
HORVU2Hr1G113120.1	Barley	plasma membrane	41.42	38.86
EER95602	Sorghum	plasma membrane	42.84	38.74
VIT_05s0077g00970.t01	Wine grape	plasma membrane	42.45	38.39
Os10t0534500-01	Rice	plasma membrane	41.55	38.15
Zm00001d027436_P001	Maize	mitochondrion	39.35	38.08
TraesCS4B01G367000.1	Wheat	plasma membrane	41.16	38.07
VIT_07s0005g01640.t01	Wine grape	plasma membrane	41.29	37.34
HORVU4Hr1G087720.1	Barley	plasma membrane, plastid	41.42	36.94
VIT_14s0083g01210.t01	Wine grape	cytosol	37.16	34.62
VIT_14s0068g00010.t01	Wine grape	cytosol	38.71	34.52
VIT_01s0011g00280.t01	Wine grape	plasma membrane	37.68	33.56
VIT_14s0068g00030.t01	Wine grape	plasma membrane	37.68	32.74
VIT_14s0068g00090.t01	Wine grape	plasma membrane	35.61	31.98

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100254190	wikigene:100254190	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:3.30.200.20
ProteinID:CCB47844	ProteinID:CCB47844.1	UniProt:F6H6D3	EMBL:FN595243	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009506	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100254190	wikigene:LOC100254190
InterPro:Malectin-like_Carb-bd_dom	PFAM:PF07714	PFAM:PF12819	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27003	PANTHER:PTHR27003:SF21	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002107EA9	ArrayExpress:VIT_16s0050g01020	EnsemblPlantsGene:VIT_16s0050g01020
EnsemblPlants:VIT_16s0050g01020.t01	unigene:Vvi.20853	RefSeq:XP_002272986	RefSeq:XP_002272986.1	SEG:seg	:

Description

No Description!

Coordinates

chr16:+:17944977..17949688

Molecular Weight (calculated)

86521.6 Da

IEP (calculated)

8.846

GRAVY (calculated)

-0.211

Length

775 amino acids

Sequence
(BLAST)

001: MRIEKSIQSR KSISLTDSNP SPGSSNLYHT ARVFTGASRY EFRIQQAGTH FVRFHFWPFN SRNHRLKSAK FGVSLNGYPI LRNFTTKNAV IKEYILRVDD
101: KKLEVLFSPE GGSRFGFVNA IEVFSAPGDL IPDYGPRLLS PSGSEEFYNL SSKILETVHR INVGGSILTP FNDTLWRTWI NDEDFLVLKS AAKPALTTHT
201: PNYQEGGATQ EIAPDNVYMT AQQMNRDNVT SDSRFNISWK FEVGSHSARH LVRLHFCDIV SKSLNLLYFN VYINGLLAVR DLDLSVLTFH ELASPYYMDF
301: VVDSDNSGVT RISVGPSDLS PVSARNAILN GVEIMKLVNF VAQQSEDKKK NIWVLVGSIV VGFVVVCLIV LAVLVALKCK KKKPKPRPAE SVGWTPLRVA
401: SSYSRMSEGT ANPYLGPNLY LGLKIPFADI QLATNNFDRS LVIGSGGFGM VYKGVLRDNT RIAVKRGVPG SRQGLPEFQT EITVLSKIRH RHLVSLVGYC
501: EEQSEMILVY EYMDKGPLKT HLYGSELPPL TWKQRLDICI GAARGLHYLH TGSAQGIIHR DIKSTNILLD ENYVAKVADF GLSKSGPCLN ETHVSTGVKG
601: SFGYLDPEYF RRQQLTDKSD VYSFGVVLLE VLCARPAVDP LLAREQVNLA EWAMQWQQKG LLAKIIDPHL VGKIKPSSLK KFGETAEKCL AEYGVDRPTM
701: GDVLWNLEYV LQLQETGTRR ESHEDSDINT SELPSHSAVP LPHSSNIRTE RSHGYASGDI STTQVFSQLM TNEGR

Best Arabidopsis Sequence Match ( AT5G24010.1 )
(BLAST)

001: MAFPINLTQT LLFFFCPLLH LSFAAFTPTD NYLINSGSNT NTSFFTTRSF LSDSSEPGSS FLSTDRSISI SDTNPSPDSP VLYNTARVFP VGGSYKFQVT
101: TKGTHFIRLH FAPFKASRFN LRSAKFRVLI NGFSVINSFS TSSVVVKEFI LKIDDPVLEI SFLPFKASGF GFVNAVEVFS APKDYIMDQG TKLVIPNSAQ
201: IFSNLSSQVL ETVHRINVGG SKLTPFNDTL WRTWVVDDNY LLLRAAARRA WTTHSPNYQN GGATREIAPD NVYMTAQEMD RDNQELQARF NISWGFQVDE
301: KRVLHLVRLH FCDIVSSSLN QLYFNVFINE YLAFKDVDLS TLTFHVLASP LYIDFVAESD RSGMLRISVG PSDLSNPARV NALLNGVEIM RILSPVSSEV
401: VSGKRNVVWI VVGSVLGGFV FLSLFFLSVL CLCRRKNNKT RSSESTGWTP LRRFRGSSNS RTTERTVSSS GYHTLRISFA ELQSGTNNFD RSLVIGVGGF
501: GMVFRGSLKD NTKVAVKRGS PGSRQGLPEF LSEITILSKI RHRHLVSLVG YCEEQSEMIL VYEYMDKGPL KSHLYGSTNP PLSWKQRLEV CIGAARGLHY
601: LHTGSSQGII HRDIKSTNIL LDNNYVAKVA DFGLSRSGPC IDETHVSTGV KGSFGYLDPE YFRRQQLTDK SDVYSFGVVL FEVLCARPAV DPLLVREQVN
701: LAEWAIEWQR KGMLDQIVDP NIADEIKPCS LKKFAETAEK CCADYGVDRP TIGDVLWNLE HVLQLQESGP LNIPEEDYGD VTDPRTARQG LSNGSNIERD
801: YGDGTSGIIS STQVFSQLMT NAGR

Arabidopsis Description

Probable receptor-like protein kinase At5g24010 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLW0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.