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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid

Predictor Summary:
  • mitochondrion 1
  • plasma membrane 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, plastid
Any Predictor:mitochondrion, plasma membrane, plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G367000.1 Wheat plasma membrane 75.03 77.8
HORVU2Hr1G113120.1 Barley plasma membrane 66.97 70.46
HORVU4Hr1G084510.2 Barley plasma membrane 66.86 66.55
Os03t0124200-01 Rice plasma membrane 58.57 60.02
Zm00001d027436_P001 Maize mitochondrion 53.62 58.18
EER95602 Sorghum plasma membrane 57.19 57.99
VIT_07s0129g00950.t01 Wine grape cytosol 21.29 53.47
Solyc03g059070.2.1 Tomato plasma membrane 26.7 48.54
VIT_00s1542g00010.t01 Wine grape plasma membrane 24.63 48.31
VIT_00s1542g00020.t01 Wine grape plasma membrane 21.63 45.63
Bra009722.1-P Field mustard cytosol, plasma membrane, plastid 27.96 43.94
KRG99398 Soybean mitochondrion, plasma membrane 20.6 43.13
GSMUA_Achr8P12240_001 Banana vacuole 31.53 43.01
GSMUA_Achr11P... Banana plasma membrane 34.29 42.75
KRH08877 Soybean plasma membrane 37.74 42.43
VIT_16s0050g01020.t01 Wine grape plastid 36.94 41.42
CDX88063 Canola plasma membrane 38.67 40.53
AT5G24010.1 Thale cress plasma membrane 38.32 40.41
KRH35245 Soybean plasma membrane 38.32 40.31
CDX80402 Canola plasma membrane 38.32 40.12
PGSC0003DMT400067688 Potato plasma membrane 37.74 40.1
KRG91576 Soybean plastid 38.55 39.88
KRH38391 Soybean plasma membrane 37.28 39.61
CDY46084 Canola mitochondrion, plasma membrane, plastid 25.2 39.46
KRH04510 Soybean mitochondrion, plasma membrane 37.63 38.79
HORVU4Hr1G058220.1 Barley plasma membrane 37.28 38.43
HORVU2Hr1G013080.1 Barley plasma membrane 36.25 38.18
VIT_07s0129g00970.t01 Wine grape plasma membrane 36.82 38.0
VIT_07s0129g00990.t01 Wine grape plasma membrane 36.48 37.78
VIT_07s0129g00880.t01 Wine grape plasma membrane 35.79 37.52
VIT_07s0129g00960.t01 Wine grape plasma membrane 35.79 37.47
HORVU1Hr1G024070.1 Barley plasma membrane 36.25 37.46
VIT_07s0129g00870.t01 Wine grape plasma membrane 35.56 37.23
HORVU7Hr1G081590.1 Barley plasma membrane, plastid 36.25 36.8
VIT_07s0129g00910.t01 Wine grape plasma membrane 35.21 36.78
Solyc03g044160.1.1 Tomato plasma membrane 34.52 36.72
CDX76865 Canola plasma membrane 34.18 36.67
KRH58006 Soybean plasma membrane 35.21 36.52
HORVU2Hr1G103780.1 Barley plasma membrane 34.87 35.86
PGSC0003DMT400038535 Potato plasma membrane 33.72 35.82
VIT_07s0129g00890.t01 Wine grape plasma membrane 29.46 35.8
HORVU5Hr1G096860.2 Barley mitochondrion 35.21 35.62
Bra039190.1-P Field mustard plasma membrane 34.18 35.61
HORVU7Hr1G010130.1 Barley plasma membrane 34.52 35.55
HORVU2Hr1G038950.5 Barley plasma membrane, vacuole 33.95 35.24
CDY21480 Canola plasma membrane 33.95 35.16
HORVU4Hr1G050700.2 Barley plasma membrane 35.44 34.61
AT2G23200.1 Thale cress plasma membrane 33.03 34.41
HORVU1Hr1G059300.1 Barley plasma membrane 35.1 34.23
VIT_07s0129g00920.t01 Wine grape cytosol, mitochondrion, plasma membrane, vacuole 33.72 33.87
HORVU5Hr1G084100.1 Barley plasma membrane 34.06 33.45
HORVU1Hr1G088680.1 Barley plasma membrane 31.65 33.33
KRH58005 Soybean plasma membrane 30.15 33.04
HORVU4Hr1G000730.1 Barley plasma membrane 33.83 33.0
HORVU3Hr1G111040.1 Barley plasma membrane 31.65 32.93
HORVU3Hr1G086590.1 Barley plasma membrane 34.18 32.85
HORVU3Hr1G024950.4 Barley plasma membrane 34.18 31.53
HORVU3Hr1G034670.3 Barley plastid 32.45 31.13
HORVU4Hr1G000420.24 Barley cytosol, mitochondrion, plasma membrane, plastid 31.3 31.05
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:2.60.120.430Gene3D:3.30.200.20UniProt:A0A287Q1M4
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:HORVU4Hr1G087720
EnsemblPlants:HORVU4Hr1G087720.1InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_domPFAM:PF07714PFAM:PF12819
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27003PANTHER:PTHR27003:SF41InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASTMHMM:TMhelix
UniParc:UPI000B483CD6SEG:seg::::
Description
No Description!
Coordinates
chrchr4H:-:638051327..638059895
Molecular Weight (calculated)
93539.3 Da
IEP (calculated)
5.885
GRAVY (calculated)
0.021
Length
869 amino acids
Sequence
(BLAST)
001: VHLPTTSTRM ELVAGTAGPN QHTTPTVLRT YVHHAPALDH PRLLRSVGIG GTAPARLHCT NKLMAVQAMV LLLLVTVILP RAALAAFSPD FSFFLACGAN
101: SSVSFPSDSP TRTFVSDAAY LSPVDAPAVS ASSTPPSLYA AARADMSAFS YRLPYPASPD ASSFLVLRLH FFPFLPSNSS QSVANISSSR FAVSVLDAYA
201: VMSSFSPPAI GGVKEFFIPR GALGGHFTIT FVPDAGSSAF VNAVELFPAP PELLWNNTVT PVDPVGSNDL LRWKQYALET VYRLNVGGPK VTTEKDTLWR
301: TWLSDGPYQY GAPGQSEVKS TSSPIIYDPS KGYSREVAPD VVYQTQRMGN YLRWTFPGEP DSRYLVRLHF CDYEVVSSVV GVGIVFDVDV GQGVASTDLM
401: PNARATQSNE AFYMDYVARA PSAGAGNLKV SIGGGMLNGL EIMRLLPVDL RSRDSLVAKR IIVITVSALV GITVLACVVV GFFAVPYPND GASGWAEQLM
501: NLSRDGKTVG TEMVSTKLHI SLAKIKAATD NFHDRNLIGV GGFGNVYKGV LTDGTPVAVK RATHASQQGL PEFQAEIVVL SGIRHRHLVS LIGYCSEQSE
601: MILVYEHMEK GTLRSHLYGS DAPPLSWRQR LEICIGAARG LHYLHRGYAE NIIHRDVKST NILLGTDNDG CTGGAIVAKV ADFGLSRVGP SFGETHVSTA
701: VKGSFGYLDP GYFKTQQLTD RSDVYSFGVV LLEVLCARPV IDQSLERGQI NIAEWAVRMR GEGGLDKIAD PRIAGEADEE SLRKFAETAD KCLADCWVDR
801: PSMGDVLWNL EYCLQLHEAD VTGDDASDDS GAGAPQLPED VVVSLLTDGA DETGLSVTEL SDSKVNLPR
Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)
001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR
Arabidopsis Description
HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.