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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • nucleus 2
  • mitochondrion 2
  • plasma membrane 5
  • cytosol 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
EpiLoc:nucleus
iPSORT:mitochondrion
MultiLoc:plasma membrane
Plant-mPloc:cytosol, nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G024950.4 Barley plasma membrane 100.0 95.97
TraesCS3D01G134400.1 Wheat plasma membrane 90.71 90.91
TraesCS3B01G151200.1 Wheat mitochondrion, plasma membrane 91.04 90.54
TraesCS3A01G308100.1 Wheat mitochondrion, plasma membrane 89.82 89.43
Os01t0155500-01 Rice plasma membrane 69.36 66.99
KXG31830 Sorghum plasma membrane 62.72 64.95
Solyc06g005230.1.1 Tomato plastid 22.79 55.08
CDY49572 Canola cytosol 17.7 54.61
PGSC0003DMT400043793 Potato cytosol, plastid 19.47 54.49
Solyc05g013300.1.1 Tomato cytosol 19.36 54.18
PGSC0003DMT400035099 Potato cytosol 20.91 49.87
GSMUA_Achr9P04140_001 Banana plasma membrane 30.97 49.04
GSMUA_Achr11P... Banana cytosol 31.64 48.64
PGSC0003DMT400043784 Potato cytosol 19.14 47.92
HORVU1Hr1G024070.1 Barley plasma membrane 44.14 47.44
KRH10340 Soybean plasma membrane 37.06 45.21
HORVU7Hr1G081590.1 Barley plasma membrane, plastid 42.37 44.74
KRG88684 Soybean plasma membrane 39.16 43.65
KRH24985 Soybean plasma membrane 40.38 43.61
CDX80236 Canola plasma membrane 38.61 43.19
Solyc11g072910.1.1 Tomato plasma membrane 39.82 43.17
PGSC0003DMT400040185 Potato plasma membrane 39.82 43.17
GSMUA_Achr5P28470_001 Banana plasma membrane 22.23 43.04
PGSC0003DMT400025093 Potato plasma membrane 39.27 42.82
VIT_06s0004g03920.t01 Wine grape plasma membrane 38.72 42.73
CDX99115 Canola plasma membrane 38.61 42.72
AT5G59700.1 Thale cress plasma membrane 39.16 42.7
Bra033826.1-P Field mustard cytosol, plasma membrane, plastid 34.07 42.66
CDX68370 Canola plasma membrane 38.5 42.44
CDX86076 Canola plasma membrane 38.38 42.42
AT3G46290.1 Thale cress plasma membrane 38.94 42.41
Bra002541.1-P Field mustard plasma membrane 38.5 41.98
Bra018214.1-P Field mustard plasma membrane 38.61 41.9
CDX82981 Canola plasma membrane 38.5 41.73
HORVU4Hr1G058220.1 Barley plasma membrane 38.61 41.4
VIT_13s0067g03780.t01 Wine grape plasma membrane 37.28 40.75
Solyc05g054860.1.1 Tomato plasma membrane 34.73 38.72
PGSC0003DMT400060442 Potato plasma membrane 34.51 38.14
HORVU5Hr1G096860.2 Barley mitochondrion 35.84 37.72
HORVU2Hr1G013080.1 Barley plasma membrane 34.4 37.7
HORVU4Hr1G084510.2 Barley plasma membrane 35.73 37.0
CDY07654 Canola plasma membrane 32.52 35.9
HORVU7Hr1G010130.1 Barley plasma membrane 33.41 35.78
Bra000130.1-P Field mustard plasma membrane 32.3 35.7
CDY24966 Canola plasma membrane 32.19 35.62
HORVU2Hr1G113120.1 Barley plasma membrane 32.52 35.59
HORVU4Hr1G050700.2 Barley plasma membrane 34.73 35.28
AT2G39360.1 Thale cress plasma membrane 31.42 34.85
HORVU1Hr1G059300.1 Barley plasma membrane 34.07 34.57
HORVU5Hr1G084100.1 Barley plasma membrane 33.74 34.46
HORVU2Hr1G038950.5 Barley plasma membrane, vacuole 31.86 34.41
HORVU4Hr1G087720.1 Barley plasma membrane, plastid 32.85 34.18
HORVU2Hr1G103780.1 Barley plasma membrane 31.86 34.08
HORVU1Hr1G088680.1 Barley plasma membrane 30.97 33.94
HORVU3Hr1G111040.1 Barley plasma membrane 30.75 33.29
HORVU4Hr1G000730.1 Barley plasma membrane 32.19 32.66
HORVU3Hr1G034670.3 Barley plastid 32.19 32.12
HORVU4Hr1G000420.24 Barley cytosol, mitochondrion, plasma membrane, plastid 30.86 31.85
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:2.60.120.430Gene3D:3.30.200.20EMBL:AK362120
EMBL:AK363062UniProt:F2DE03GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:HORVU3Hr1G086590EnsemblPlants:HORVU3Hr1G086590.1InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_dom
PFAM:PF07714PFAM:PF12819ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27003
PANTHER:PTHR27003:SF67InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00020060DDSEG:seg:
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DE03]
Coordinates
chrchr3H:+:617810580..617814201
Molecular Weight (calculated)
97805.3 Da
IEP (calculated)
6.752
GRAVY (calculated)
-0.103
Length
904 amino acids
Sequence
(BLAST)
001: MAAAARHRPA RARGALWIVS VLLVCVAAAY TPEDNYLVSC GSSLDTPVGR RLFLADDGGS GAVTLTSPRS AAVKASPDLV SGFRDAALYQ NARVFSAPSS
101: YSFAIKRRGR HFLRLHFFPF VYRSYDLAAA ARAFKVSTQD AVLLEDGIPA PEPGNASSSP QPARVEFLLD VERDTLVVSF VPLIDGGIAF VNAVEVVSVP
201: DNLVTDAAAT TADSSSGRPE LNPAALPLQT AYRVNVGGPV VAPDDDALWR EWTTDQPLSD PRVDAVTREV RYNRTLNRLP GQATVTDAPD IVYATARELV
301: ITNISMDGQK QMAWQFDVDT RSSYFIRFHF CDIVGNASHQ LRMNAYVDDA TVKQDLDLAA IGNGALAFPY YTDFVLSASA ASGKLAVHVG PRENKIVSPA
401: AILNGIEIMK MHLSAGSVVV VEPAAKAAKS RLAVLLGSVC GAFAFVTIAV ALAIVLRKKK NEKEEKEGDK EQPTPTQSQS STPWMPLLGR FSVRSAIASG
501: SSSFTTAGNT PGASPRAAAA AAAAVMPSYR FPLAMLQDAT RNFDDSLVIG EGGFGKVYGA VLQDGTKVAV KRASPESRQG AREFRTEIEL LSGLRHRHLV
601: SLVGYCDERE EMILLYEYME HGSLRSRLYG RSASPLSWAQ RLEACAGAAR GLLYLHTAVD KPVIHRDVKS SNILLDGDLT GKVADFGLSK AGPVLDETHV
701: STAVKGSFGY VDPEYCRTRQ LTAKSDVYSL GVVLLEAVCA RPVVDPRLPK PMSNLVEWGL HWQGRGELEK IVDRRIAAAA RPAALRKYGE TVARCLAERA
801: ADRPTMEDVV WNLQFVMRLQ EGDGLDFSDV SSLNMVTELR PPRRQRNSVD CDGLDLSDVN SLKLVTEQTQ PQTGSVEGDG VADDDFTDAS MRGTFWQMVN
901: VRSR
Best Arabidopsis Sequence Match ( AT2G21480.1 )
(BLAST)
001: MEIRKKPNIP MCLVLDSSSR PFMTLLFTIL LFLTGLASAV GAVGGSPTAG FKPADDILID CGSKSSTKTP EGRVFKSDSE TVQYIEAKDD IQVSAPPSDK
101: LPSPIYLTAK IFREEAIYKF HLTRPGWHWV RLHFFAFPND KFDLQQATFS VLTEKYVLLH NFKLSNDNND SQATVQKEYL LNMTDAQFAL RFKPMKGSAA
201: FINGIELVSA PDELISDAGT SLFPVNGFSG LSDYAYQSVY RVNVGGPLIT PQNDTLGRTW TPDKEYLKDE NLAKDVKTNP TAIIYPPGVT PLIAPQTVYA
301: TGAEMADSQT IDPNFNVTWN FPSNPSFHYF IRLHFCDIIS KSLNDLYFNV YINGKTAISG LDLSTVAGDL SAPYYKDIVV NSTLMTSELQ VQIGPMGEDT
401: GKKNAILNGV EVLKMSNSVN SLDGEFGVDG QRASMGKQGM VATAGFVMMF GAFVGLGAMV YKWKKRPQDW QKRNSFSSWL LPIHAGDSTF MTSKTGSHKS
501: NLYNSALGLG RYFSLSELQE VTKNFDASEI IGVGGFGNVY IGTIDDGTQV AIKRGNPQSE QGITEFHTEI QMLSKLRHRH LVSLIGYCDE NAEMILVYEY
601: MSNGPFRDHL YGKNLSPLTW KQRLEICIGA ARGLHYLHTG TAQGIIHRDV KSTNILLDEA LVAKVADFGL SKDVAFGQNH VSTAVKGSFG YLDPEYFRRQ
701: QLTDKSDVYS FGVVLLEALC ARPAINPQLP REQVNLAEWA MLWKQKGLLE KIIDPHLVGA VNPESMKKFA EAAEKCLADY GVDRPTMGDV LWNLEYALQL
801: QEAFSQGKAE AEEVETPKPV AVPAAAPTSP AATTAAASER PVSQTEEKDD STVDQHSGTT MFTQFASLNG R
Arabidopsis Description
Probable receptor-like protein kinase At2g21480 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJT0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.