Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033826.1-P Field mustard cytosol, plasma membrane, plastid 84.88 96.4
CDX82981 Canola plasma membrane 97.8 96.16
CDX99115 Canola plasma membrane 86.83 87.15
CDX86076 Canola plasma membrane 86.46 86.67
CDY49572 Canola cytosol 30.49 85.32
AT3G46290.1 Thale cress plasma membrane 84.39 83.37
CDX80236 Canola plasma membrane 73.05 74.13
GSMUA_Achr9P04140_001 Banana plasma membrane 42.32 60.77
GSMUA_Achr11P... Banana cytosol 42.8 59.69
KXG20506 Sorghum plasma membrane 57.8 56.36
Zm00001d046838_P002 Maize plasma membrane 57.44 55.94
TraesCS7A01G340700.1 Wheat plasma membrane, plastid 57.44 55.02
HORVU7Hr1G081590.1 Barley plasma membrane, plastid 57.32 54.91
TraesCS7B01G241900.1 Wheat plasma membrane 57.07 54.87
Os06t0334300-01 Rice plasma membrane 57.44 54.83
CDY43041 Canola cytosol 39.51 53.82
TraesCS7D01G338800.3 Wheat plastid 57.32 53.35
GSMUA_Achr5P28470_001 Banana plasma membrane 30.0 52.68
HORVU1Hr1G024070.1 Barley plasma membrane 53.05 51.72
Zm00001d037544_P001 Maize plasma membrane 52.68 51.67
EES17770 Sorghum plasma membrane 52.56 51.62
CDY67402 Canola plasma membrane 45.85 51.44
CDY43828 Canola plasma membrane 50.24 51.37
TraesCS1A01G108100.1 Wheat plasma membrane 52.56 51.07
TraesCS1B01G130300.2 Wheat plasma membrane 52.56 51.01
TraesCS1D01G110900.1 Wheat plasma membrane 49.63 50.81
CDY63832 Canola plasma membrane 52.8 50.76
Os03t0281500-01 Rice plasma membrane 50.73 49.58
CDX88063 Canola plasma membrane 49.02 48.49
CDX80402 Canola plasma membrane 48.78 48.19
Zm00001d028686_P001 Maize plasma membrane 49.88 48.06
HORVU4Hr1G058220.1 Barley plasma membrane 49.27 47.92
TraesCS4B01G201600.1 Wheat plasma membrane 49.51 47.88
TraesCS4A01G102900.1 Wheat plasma membrane 49.39 47.7
TraesCS4D01G202300.1 Wheat plasma membrane 49.02 47.35
EER95065 Sorghum plasma membrane 50.37 47.31
CDX87209 Canola plasma membrane 47.93 46.9
CDY15889 Canola plasma membrane 48.29 46.32
CDY12121 Canola plasma membrane 48.17 46.09
CDX90312 Canola plasma membrane 48.05 45.97
CDX99588 Canola plasma membrane 47.93 45.91
CDY41962 Canola plasma membrane 48.05 45.87
CDY42608 Canola plasma membrane 37.93 45.74
CDY56768 Canola plasma membrane 47.68 45.73
CDX72717 Canola plasma membrane 47.56 45.61
CDY07654 Canola plasma membrane 45.0 45.05
CDY24966 Canola plasma membrane 44.88 45.04
CDY46084 Canola mitochondrion, plasma membrane, plastid 30.12 44.5
CDY09559 Canola cytosol, plasma membrane, plastid 38.66 43.01
CDY29022 Canola plasma membrane 41.95 42.84
CDX90645 Canola plasma membrane 41.59 41.89
CDX78012 Canola plasma membrane 43.29 41.72
CDY33271 Canola plasma membrane 43.17 41.36
CDY02307 Canola plasma membrane 42.93 41.27
CDY16299 Canola plasma membrane 43.29 40.99
KXG31830 Sorghum plasma membrane 42.8 40.21
CDX76865 Canola plasma membrane 39.63 40.12
Os01t0155500-01 Rice plasma membrane 44.63 39.1
CDY21480 Canola plasma membrane 40.0 39.09
TraesCS3D01G134400.1 Wheat plasma membrane 42.8 38.91
TraesCS3A01G308100.1 Wheat mitochondrion, plasma membrane 43.05 38.88
CDY33885 Canola plasma membrane 39.63 38.64
HORVU3Hr1G086590.1 Barley plasma membrane 42.44 38.5
TraesCS3B01G151200.1 Wheat mitochondrion, plasma membrane 42.56 38.39
CDY05602 Canola plasma membrane 39.63 38.06
CDX86206 Canola plasma membrane 39.63 37.83
CDY37883 Canola plasma membrane 36.1 37.33
HORVU3Hr1G024950.4 Barley plasma membrane 42.44 36.94
CDX78036 Canola plasma membrane 37.8 35.76
CDY37884 Canola cytosol 37.68 35.64
CDY36996 Canola plasma membrane 37.68 35.44
CDX74492 Canola plasma membrane 38.17 35.37
CDX73714 Canola plasma membrane 43.54 30.36
CDY48660 Canola plasma membrane 20.73 29.06
CDY26624 Canola plasma membrane 37.56 21.51
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:2.60.120.430Gene3D:3.30.200.20GO:A0A078BUG3
EnsemblPlants:CDX68370ProteinID:CDX68370ProteinID:CDX68370.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00125705001
InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_domPFAM:PF07714PFAM:PF12819ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27003PANTHER:PTHR27003:SF94InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EEE92BSEG:seg::::
Description
BnaC01g24480D
Coordinates
chrLK031788:+:243680..246645
Molecular Weight (calculated)
90061.1 Da
IEP (calculated)
6.248
GRAVY (calculated)
-0.163
Length
820 amino acids
Sequence
(BLAST)
001: MGVEKLVTLV LVSCLFCTCC HGFTPQDNYL INCGSPSNSS LMDRVFMSDK LASNLLSSDN QEILASQSSS SSSDIYQTAR VFTGVASYKI SVARGRHWVR
101: LHFNPFNYQT YQMGSAKFAV SSQTHVLLSD FTVKSRDVKE YSLNVDTDDL VLTFTPSGGS FAFVNAIEVI SVPDSLITSS PPPRVVGGSG AFQGSLSSHA
201: FETIHRLNMG GSLVTPNNDT LTRTWQPDSG FLLEKNLAKT VSKIPTVNFV PGYATEETAP KTVYGTCTEM NSDQNPNAIF NVTWEFDVDP GFQYFLRFHF
301: CDIVSLSLNQ LYFNLYIDSM LAVTDLDLST YVDNTLAGAY SMDLVMPSPK SSNKMRVSIG PSTVHTDFPN AIVNGLEIMK MNNSRGQLSG GAFVPGGGPS
401: TKQKNVGLIV GATVGPLLAL ALLGVCFVFF CKKRKLGQDG YSKTWMPFSI NGTSVGSKGS RGTTLTSITT NANYRIPFAA VKDATNNFDE SRNIGVGGFG
501: KVYKGELNDG TRVAVKRGNP KSQQGLAEFR TEIEMLSQFR HRHLVSLIGY CDENNEMILV YEYMENGTVK GHLYGSGLPS LTWKQRLEIC IGAARGLHYL
601: HTGDSKPVIH RDVKSANILL DENFMAKVAD FGLSKTGPEL DQTHVSTAVK GSFGYLDPEY FRRQQLTEKS DVYSFGVVLF EVLCARPVID PTLPREMVNL
701: AEWAMKWQKK GLLDQIIDQS LRCNIRPDSL RKFAETAEKC LADYGVDRPS MGDVLWNLEY ALQLQEAVVD GEPEDNSTNM IDTSVNVPGT AGRFEESSID
801: DLSGVSMSKV FSQLVKSEGR
Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)
001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR
Arabidopsis Description
HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.