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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026926.1-P Field mustard plasma membrane 97.35 96.01
CDY49572 Canola cytosol 10.27 50.17
CDX78012 Canola plasma membrane 29.68 49.94
CDY29022 Canola plasma membrane 27.58 49.19
CDY33271 Canola plasma membrane 29.19 48.83
CDX90645 Canola plasma membrane 27.44 48.28
CDY16299 Canola plasma membrane 28.63 47.34
CDY33885 Canola plasma membrane 23.74 40.43
CDX78036 Canola plasma membrane 24.16 39.91
CDY05602 Canola plasma membrane 23.67 39.7
CDY36996 Canola plasma membrane 23.95 39.33
CDY37883 Canola plasma membrane 21.72 39.22
CDX86206 Canola plasma membrane 23.25 38.77
CDY37884 Canola cytosol 23.32 38.52
CDX74492 Canola plasma membrane 23.6 38.19
CDX99115 Canola plasma membrane 21.58 37.82
CDX68370 Canola plasma membrane 21.51 37.56
CDY43041 Canola cytosol 15.71 37.38
CDX82981 Canola plasma membrane 21.72 37.29
CDX86076 Canola plasma membrane 21.3 37.29
CDY09559 Canola cytosol, plasma membrane, plastid 18.72 36.36
CDY46084 Canola mitochondrion, plasma membrane, plastid 14.04 36.22
CDX73714 Canola plasma membrane 29.54 35.97
CDX88063 Canola plasma membrane 20.74 35.83
CDX80236 Canola plasma membrane 20.11 35.64
KRH70978 Soybean mitochondrion, plasma membrane, vacuole 20.25 35.37
CDX87209 Canola plasma membrane 20.67 35.32
CDX80402 Canola plasma membrane 20.46 35.3
CDY43828 Canola plasma membrane 19.76 35.29
CDY67402 Canola plasma membrane 17.81 34.88
CDY02307 Canola plasma membrane 20.6 34.58
CDY63832 Canola plasma membrane 20.46 34.35
CDX90312 Canola plasma membrane 20.53 34.31
CDX72717 Canola plasma membrane 20.39 34.15
CDY12121 Canola plasma membrane 20.39 34.07
CDY56768 Canola plasma membrane 20.32 34.04
CDY48660 Canola plasma membrane 13.9 34.02
CDX99588 Canola plasma membrane 20.18 33.76
CDY15889 Canola plasma membrane 20.11 33.68
CDY41962 Canola plasma membrane 20.18 33.64
CDX76865 Canola plasma membrane 18.85 33.33
CDY42608 Canola plasma membrane 15.64 32.94
CDY07654 Canola plasma membrane 18.44 32.23
CDY24966 Canola plasma membrane 18.37 32.19
CDY21480 Canola plasma membrane 18.65 31.82
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:11.10.2.4.2MapMan:18.4.1.16MapMan:18.4.1.24.1Gene3D:2.60.120.430Gene3D:3.30.200.20GO:A0A078GN24
UniProt:A0A078GN24EnsemblPlants:CDY26624ProteinID:CDY26624ProteinID:CDY26624.1GO:GO:0000003GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0008150GO:GO:0008152
GO:GO:0009856GO:GO:0009875GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016740GO:GO:0019538GO:GO:0048544EnsemblPlantsGene:GSBRNA2T00035500001InterPro:IPR000719InterPro:IPR003609
InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_domPFAM:PF00069PFAM:PF00954PFAM:PF07714PFAM:PF08276
PFAM:PF11883PFAM:PF12819ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50948
PANTHER:PTHR27002PANTHER:PTHR27002:SF165InterPro:Pan_appInterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSInterPro:S-locus_recpt_kinase_C
SMART:SM00220SMART:SM00473SUPFAM:SSF56112InterPro:S_locus_glycoprot_domInterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_AS
TMHMM:TMhelixUniParc:UPI0004EDBDC9SEG:seg:::
Description
BnaA09g46530DBnaA09g46530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GN24]
Coordinates
chrLK032192:-:374235..380207
Molecular Weight (calculated)
159237.0 Da
IEP (calculated)
7.156
GRAVY (calculated)
-0.145
Length
1432 amino acids
Sequence
(BLAST)
0001: MLTSTSSFPP ECEEVLLYCS GGVSVIGVGN RTWMPDQLFK CLSTSGESKT SPALTQDSSV VPSVPYMSAR VFKSPFTYSF PVASGRKFLR LYFYPNSYDG
0101: LNATLSLFSL SSGPYTLLRN FSASQTVQEM SLSYIVKEFV VNAEGGTLNL TFTPESTPSN AYAFVNGIEV TSMPDIYPNR VFTIVGTSKP IAMDKNTFLE
0201: MVYRVNIGGR GIYPFEDPLF RTWYQDLFIY SRGDRVTGAV VSESVHSYAP EEVYSSARAM ESSLAEENLK FNLSWSFTVD SRFHYLIRLH FCEVAPGVDK
0301: SNQRVFSIFL NSATAEPKAD IVEWSGGQGL ALHRDYIVDV ASYNRISVDL HPNEDSLYYD AILNGLEIFK LNTSDGNLAG PNPLPSPPVT PQPHKFKRVT
0401: PHRLKKALII AGLVLSAVVV LGVVVAVAAA VTFKYRHRRT AQSPQPEAAT ACCRHFSLAE VEAATENFHE SRLIGVGGFG KVYRGQLDGG DVAIKRATPK
0501: SNHDLHQVLT EIETLSKLRH RHLVSLTGCC EEDGELILIY DFMSEGTLKD HLHGSSSNVP LLPWKRRVEI CIGAARGLHY LHTGASQTIV HRDVKSTNIL
0601: LDQNFVAKVS DFGLAKYYIS RDNTQVISNA KGTVGYMDPE YYGGERLTVK SDIYAFGIVL LEALCARPAV DVSSADQRVS LATWAQNFYK KGMLDQMVDP
0701: RLKGDINSQS LKKFAETAIN CVRRSGVERP STAAVLVNLE LALKLQEDGL DRKKTICRES DMDSDVHEAG YSRSSGRSNG SKHFDGLSLR HALRLFQSLR
0801: ETPFPVWRSG PWNGQIFIGL PDSISLLFLD GFNVSNDNQG TFLISYATDS FMHHFNLDPD GALYMRSWNT STRAWTVDAI IPSTTCDAYN RCGPFASCGL
0901: QEVPPCKCVK GYVPRNSTEW NRGIFTNECV RRVPLKCNVS NGGGGKEDGF FKMQKMKLPA NVEKSVANEK DCPKVCLENC SCIAYAYDRG IGCMLWSGSL
1001: VDMQSLLGSG IDLYIRVSHS EFSDLICFLL LLHLILRTVL ITSSVLGVVF VAMVCVLLAC RKFKKRPAPE GDRSAELLFQ RMEELTSGNE SSSNQVKLKD
1101: LPLFEFEVLA TSTDNFSLIN KLGQGGFGPV YKGILPNGQE LAVKRLSRAS GQGLEELMNE VVVISKLQHR NLVKLLGCCI EGEERLLVYE YMSKKSLDAY
1201: LFDPMKQNIL DWKTRFNIME GICRGLLYLH RDSRLKIIHR DLKASNILLD ENLNPKISDF GLARVFRANE DEANTTRVVG TYGYMSPEYA MEGFFSEKSD
1301: VFSLGVIFLE IISGKKNSHK EDNNLNLLAY AWKLWNDGKA NSLADPTIFN ECFEKEFTKC VQIGLLCVQE VASDRPNVST MIWMLTTENT NLPEPKQPAF
1401: IATRRVFEAE SSGQSSQKVS INDVSLTAVT GR
Best Arabidopsis Sequence Match ( AT1G11300.1 )
(BLAST)
001: MRLHESSSPF VCILVLSCFF LSVSLAQERA FFSGKLNDSE TIVSSFRTFR FGFFSPVNST SRYAGIWYNS VSVQTVIWVA NKDKPINDSS GVISVSQDGN
101: LVVTDGQRRV LWSTNVSTQA SANSTVAELL DSGNLVLKEA SSDAYLWESF KYPTDSWLPN MLVGTNARIG GGNVTITSWK SPSDPSPGSY TAALVLAAYP
201: ELFIMNNNNN NSTVWRSGPW NGQMFNGLPD VYAGVFLYRF IVNDDTNGSV TMSYANDSTL RYFYMDYRGS VIRRDWSETR RNWTVGLQVP ATECDNYRRC
301: GEFATCNPRK NPLCSCIRGF RPRNLIEWNN GNWSGGCTRR VPLQCERQNN NGSADGFLRL RRMKLPDFAR RSEASEPECL RTCLQTCSCI AAAHGLGYGC
401: MIWNGSLVDS QELSASGLDL YIRLAHSEIK TKDKRPILIG TILAGGIFVV AACVLLARRI VMKKRAKKKG RDAEQIFERV EALAGGNKGK LKELPLFEFQ
501: VLAAATNNFS LRNKLGQGGF GPVYKGKLQE GQEIAVKRLS RASGQGLEEL VNEVVVISKL QHRNLVKLLG CCIAGEERML VYEFMPKKSL DYYLFDSRRA
601: KLLDWKTRFN IINGICRGLL YLHRDSRLRI IHRDLKASNI LLDENLIPKI SDFGLARIFP GNEDEANTRR VVGTYGYMAP EYAMGGLFSE KSDVFSLGVI
701: LLEIISGRRN SNSTLLAYVW SIWNEGEINS LVDPEIFDLL FEKEIHKCIH IGLLCVQEAA NDRPSVSTVC SMLSSEIADI PEPKQPAFIS RNNVPEAESS
801: ENSDLKDSIN NVTITDVTGR
Arabidopsis Description
G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXB4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.