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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033826.1-P Field mustard cytosol, plasma membrane, plastid 85.73 99.03
CDX68370 Canola plasma membrane 96.16 97.8
CDX99115 Canola plasma membrane 86.69 88.49
CDX86076 Canola plasma membrane 86.33 88.02
CDY49572 Canola cytosol 30.7 87.37
AT3G46290.1 Thale cress plasma membrane 84.05 84.46
CDX80236 Canola plasma membrane 72.3 74.63
GSMUA_Achr9P04140_001 Banana plasma membrane 41.73 60.95
GSMUA_Achr11P... Banana cytosol 42.21 59.86
KXG20506 Sorghum plasma membrane 57.07 56.6
Zm00001d046838_P002 Maize plasma membrane 56.71 56.18
TraesCS7A01G340700.1 Wheat plasma membrane, plastid 56.83 55.37
Os06t0334300-01 Rice plasma membrane 56.83 55.18
HORVU7Hr1G081590.1 Barley plasma membrane, plastid 56.59 55.14
TraesCS7B01G241900.1 Wheat plasma membrane 56.35 55.1
CDY43041 Canola cytosol 39.09 54.15
TraesCS7D01G338800.3 Wheat plastid 56.59 53.58
GSMUA_Achr5P28470_001 Banana plasma membrane 29.74 53.1
CDY43828 Canola plasma membrane 49.88 51.87
CDY67402 Canola plasma membrane 45.44 51.85
Zm00001d037544_P001 Maize plasma membrane 51.92 51.79
EES17770 Sorghum plasma membrane 51.8 51.74
HORVU1Hr1G024070.1 Barley plasma membrane 52.16 51.72
CDY63832 Canola plasma membrane 52.28 51.11
TraesCS1A01G108100.1 Wheat plasma membrane 51.68 51.07
TraesCS1B01G130300.2 Wheat plasma membrane 51.68 51.01
TraesCS1D01G110900.1 Wheat plasma membrane 48.8 50.81
Os03t0281500-01 Rice plasma membrane 50.12 49.82
Zm00001d028686_P001 Maize plasma membrane 49.64 48.65
CDX88063 Canola plasma membrane 48.08 48.37
HORVU4Hr1G058220.1 Barley plasma membrane 48.56 48.04
TraesCS4B01G201600.1 Wheat plasma membrane 48.68 47.88
CDX80402 Canola plasma membrane 47.6 47.83
TraesCS4A01G102900.1 Wheat plasma membrane 48.56 47.7
EER95065 Sorghum plasma membrane 49.76 47.54
TraesCS4D01G202300.1 Wheat plasma membrane 48.2 47.35
CDX87209 Canola plasma membrane 47.24 47.02
CDY15889 Canola plasma membrane 47.72 46.55
CDY12121 Canola plasma membrane 47.72 46.44
CDX90312 Canola plasma membrane 47.6 46.32
CDY41962 Canola plasma membrane 47.6 46.22
CDX99588 Canola plasma membrane 47.36 46.14
CDY56768 Canola plasma membrane 47.24 46.08
CDX72717 Canola plasma membrane 47.12 45.96
CDY42608 Canola plasma membrane 37.41 45.88
CDY07654 Canola plasma membrane 44.6 45.42
CDY24966 Canola plasma membrane 44.48 45.41
CDY46084 Canola mitochondrion, plasma membrane, plastid 29.74 44.68
CDY29022 Canola plasma membrane 41.49 43.09
CDY09559 Canola cytosol, plasma membrane, plastid 37.89 42.88
CDX90645 Canola plasma membrane 41.13 42.14
CDX78012 Canola plasma membrane 42.81 41.95
CDY33271 Canola plasma membrane 42.81 41.71
CDY02307 Canola plasma membrane 42.33 41.38
CDY16299 Canola plasma membrane 42.93 41.34
KXG31830 Sorghum plasma membrane 42.09 40.21
CDX76865 Canola plasma membrane 38.97 40.12
CDY21480 Canola plasma membrane 39.45 39.21
Os01t0155500-01 Rice plasma membrane 44.0 39.21
TraesCS3D01G134400.1 Wheat plasma membrane 42.09 38.91
TraesCS3A01G308100.1 Wheat mitochondrion, plasma membrane 42.33 38.88
CDY33885 Canola plasma membrane 38.85 38.53
HORVU3Hr1G086590.1 Barley plasma membrane 41.73 38.5
TraesCS3B01G151200.1 Wheat mitochondrion, plasma membrane 41.85 38.39
CDY05602 Canola plasma membrane 38.85 37.94
CDX86206 Canola plasma membrane 38.85 37.72
CDY37883 Canola plasma membrane 35.49 37.33
HORVU3Hr1G024950.4 Barley plasma membrane 41.73 36.94
CDX78036 Canola plasma membrane 37.65 36.22
CDY37884 Canola cytosol 37.29 35.87
CDY36996 Canola plasma membrane 37.41 35.78
CDX74492 Canola plasma membrane 37.89 35.71
CDX73714 Canola plasma membrane 43.05 30.53
CDY48660 Canola plasma membrane 20.02 28.55
CDY26624 Canola plasma membrane 37.29 21.72
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:2.60.120.430Gene3D:3.30.200.20GO:A0A078D0U3EnsemblPlants:CDX82981
ProteinID:CDX82981ProteinID:CDX82981.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00138408001
InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_domPFAM:PF07714PFAM:PF12819PIRSF:PIRSF000641
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51257PANTHER:PTHR27003PANTHER:PTHR27003:SF94
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220InterPro:SRK-like_kinaseSUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EEF649SEG:seg:
Description
BnaA01g19810D
Coordinates
chrLK031831:+:71247..74342
Molecular Weight (calculated)
91522.5 Da
IEP (calculated)
6.213
GRAVY (calculated)
-0.204
Length
834 amino acids
Sequence
(BLAST)
001: MGVEKLATLV LVSCLFCSCC HGFTPQDNYL INCGSPSNST LTDRVFMSDK LASNLLSSDN QEILASQSSS SSSDIYQTAR VFTGVARYKF SVARGRHWVR
101: LHFSPFNYQT YQMGSANFAV SSQTHVLLTD FTVKSRDVKE YSLNVDTDDL VLTFTPSGGS FAFVNAIEVI SVPDSLITSS PPPRVVGASG AFQGSLSSHA
201: FETIHRLNMG GSLVTPNNDT LTRTWQPDSG FLLEKNLAKT VSKIPSVNFV PGYATEETAP KTVYGTCTEM NSDQNPNAIF NVTWELDVDP GFHYFLRFHF
301: CDIVSLSLNQ LYFNLYIDSM LAVTDLDLST YVDNTLAGAY SMDLVMPSPK SSNKMRVSIG PSTVHTDYPN AIVNGLEIMK MNNSRGQLSD GAFVPGGGGP
401: STKQKNVGLI VGATVGPLLA LALLGACFVF FCKKRKRGQD GYSKTWMPFS INGTSVGSKG SRGTTLTSIT TNANYRIPFA AVKDATNNFD ESRNIGVGGF
501: GKVYKGELND GTRVAVKRGN PKSQQGLAEF RTEIEMLSQF RHRHLVSLIG YCDENNEMIL VYEYMENGTV KGHLYGSGLP SLTWKQRLEI CIGAARGLHY
601: LHTGDSKPVI HRDVKSANIL LDENFMAKVA DFGLSKTGPE LDQTHVSTAV KGSFGYLDPE YFRRQQLTEK SDVYSFGVVL FEVLCARPVI DPTLPREMVN
701: LAEWAMKWQK KGLLDQIIDQ SLRGNIRPDS LRKFAETAEK CLADYGVDRP SMGDVLWNLE YALQLQEAVV DGEPEDNSTN MIGDLPPQIN NFSQGDTSVN
801: VPGTAGRFEE SSIDDLSGVS MSKVFSQLVK SEGR
Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)
001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR
Arabidopsis Description
HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.