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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
  • nucleus 2
  • mitochondrion 1
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:cytosol, mitochondrion, nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 27800704
plastid: 27992503
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G202300.1 Wheat plasma membrane 70.68 69.85
Zm00001d028686_P001 Maize plasma membrane 70.8 69.8
HORVU4Hr1G058220.1 Barley plasma membrane 70.08 69.75
TraesCS4A01G102900.1 Wheat plasma membrane 70.44 69.61
TraesCS4B01G201600.1 Wheat plasma membrane 69.96 69.22
EER95065 Sorghum plasma membrane 71.51 68.73
CDY49572 Canola cytosol 23.6 67.58
Solyc06g005230.1.1 Tomato plastid 29.68 66.58
PGSC0003DMT400043793 Potato cytosol, plastid 23.6 61.3
Solyc05g013300.1.1 Tomato cytosol 22.65 58.82
GSMUA_Achr9P04140_001 Banana plasma membrane 39.45 57.97
GSMUA_Achr11P... Banana cytosol 40.41 57.65
PGSC0003DMT400043784 Potato cytosol 23.96 55.68
PGSC0003DMT400035099 Potato cytosol 24.43 54.09
Os06t0334300-01 Rice plasma membrane 54.47 53.2
GSMUA_Achr5P28470_001 Banana plasma membrane 29.32 52.68
Bra033826.1-P Field mustard cytosol, plasma membrane, plastid 45.05 52.35
CDX99115 Canola plasma membrane 50.77 52.14
PGSC0003DMT400025093 Potato plasma membrane 51.01 51.63
KRH10340 Soybean plasma membrane 45.41 51.42
KRH24985 Soybean plasma membrane 51.25 51.37
CDX86076 Canola plasma membrane 50.06 51.34
KRG88684 Soybean plasma membrane 49.46 51.17
Solyc11g072910.1.1 Tomato plasma membrane 50.77 51.08
PGSC0003DMT400040185 Potato plasma membrane 50.77 51.08
VIT_06s0004g03920.t01 Wine grape plasma membrane 49.82 51.04
Bra018214.1-P Field mustard plasma membrane 50.42 50.78
CDX68370 Canola plasma membrane 49.58 50.73
CDX80236 Canola plasma membrane 48.51 50.37
CDX82981 Canola plasma membrane 49.82 50.12
AT3G46290.1 Thale cress plasma membrane 49.34 49.88
Bra002541.1-P Field mustard plasma membrane 48.63 49.22
AT5G59700.1 Thale cress plasma membrane 48.39 48.97
VIT_13s0067g03780.t01 Wine grape plasma membrane 48.03 48.73
Os01t0253000-01 Rice plasma membrane 24.43 46.91
Solyc05g054860.1.1 Tomato plasma membrane 44.22 45.75
PGSC0003DMT400060442 Potato plasma membrane 43.86 44.99
Bra000130.1-P Field mustard plasma membrane 42.43 43.52
CDY24966 Canola plasma membrane 42.19 43.33
CDY07654 Canola plasma membrane 42.19 43.22
Os03t0759600-00 Rice plasma membrane, plastid 45.29 42.6
AT2G39360.1 Thale cress plasma membrane 41.12 42.33
Os06t0126250-01 Rice plasma membrane 41.95 41.66
Os03t0124200-01 Rice plasma membrane 41.95 41.51
Os01t0155500-01 Rice plasma membrane 45.53 40.81
Os10t0534500-01 Rice plasma membrane 40.64 40.4
Os07t0147600-01 Rice plasma membrane 38.86 38.4
Os04t0619600-01 Rice plasma membrane 38.62 38.39
Os01t0769700-01 Rice plasma membrane 40.76 38.17
Os05t0280700-01 Rice plasma membrane 39.21 37.86
Os03t0333200-01 Rice plasma membrane 39.69 37.29
Os05t0318700-02 Rice plasma membrane 37.78 35.98
Os05t0317900-01 Rice plasma membrane 34.68 34.4
Os05t0317700-01 Rice plasma membrane 34.33 34.24
Os01t0253100-01 Rice plasma membrane 25.15 29.8
Os05t0318600-01 Rice plasma membrane 19.19 28.55
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:3.30.200.20EntrezGene:4332446ProteinID:ABF95312.1
EMBL:AK100137ProteinID:BAF11657.1ProteinID:BAS83574.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_dom
EnsemblPlantsGene:Os03g0281500EnsemblPlants:Os03t0281500-01PFAM:PF07714PFAM:PF12819ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27003PANTHER:PTHR27003:SF65InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q10N60
SMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0000DB495DRefSeq:XP_015630459.1SEG:seg:::
Description
Catharanthus roseus receptor-like kinase1-like kinase 7Similar to Resistance protein candidate (Fragment). (Os03t0281500-01)
Coordinates
chr3:+:9632806..9635793
Molecular Weight (calculated)
90485.5 Da
IEP (calculated)
8.664
GRAVY (calculated)
0.002
Length
839 amino acids
Sequence
(BLAST)
001: MATVLEMLVQ LAVVVTVLCA AVRAYTPADS YLFLCGTSGN ATVDGRTFVG DAGLPASVLM APQSTEANMP ANQVTGAGDD SPALYQSARV FTAPANYAFS
101: AKPGRHFVRL RFFPFRYQSY DLAADAAFNV SVQGVVFVDG YTPKNGTAVV REFSVNITGR ALVIAFTPTG KKVAFVNAIE VVSHPDELIG DTAPMVNPRN
201: QSQYTGLTAK ALETVHRINM GEPKVTPNND TLWRTWLPDW TFLHESSFAA HNQVSPAMIK YQSGYATSLT APSAVYTTVT ELNTTAAMVG NTQAQLNLTW
301: KFNAPAVSDY LLRLHLCDIV SKATLGVVFN VYVGQWRVLQ DYESSGDTFS LLATPLYKDF VLAASDAAKG TITVSIGSST ATNALPGGFL NGLEIMRIVG
401: STGSIDGATS PRGSKIKTGI IAGSAVGGAV LAIALGCVAV RMLRRKKKPV KQPSNTWVPF SASALGARSR TSFGRSSIVN VVTLGQNGAG AGAGYRFPFA
501: ALQEATGGFE EEMVIGVGGF GKVYRGTLRD GTQVAVKRGN RLSQQGLNEF RTEIELLSQL RHRHLVSLIG YCDERGEMIL VYEYMAKGTL RSHLYGSDLP
601: PLPWKQRLEA CIGAARGLHY LHTGSAKAII HRDVKSANIL LDDGFMAKVA DFGLSKTGPE LDKTHVSTAV KGSFGYLDPE YFRRQMLTEK SDVYSFGVVL
701: LEVLCARAVI DPTLPREMVN LAEWATRRLR DGELDRIVDQ KIAGTIRPDS LKKFADTAEK CLAEYGVERP SMGDVLWCLE YALQLQVASP DSSVTTLQRS
801: SSISSVVTDA TVSANLGDLD GMSMKRVFSK MLKSEEEGR
Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)
001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR
Arabidopsis Description
HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.