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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • nucleus 2
  • mitochondrion 1
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:cytosol, mitochondrion, nucleus, plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029047_P001 Maize plasma membrane 84.6 85.55
Zm00001d047533_P001 Maize mitochondrion, plasma membrane 84.71 85.47
EER94913 Sorghum plasma membrane 85.16 85.25
HORVU1Hr1G059300.1 Barley plasma membrane 84.49 84.96
TraesCS1D01G228900.1 Wheat plasma membrane 84.26 84.55
TraesCS1B01G241400.1 Wheat plasma membrane 84.15 84.53
HORVU4Hr1G050700.2 Barley plasma membrane 83.93 84.49
TraesCS4B01G171100.1 Wheat plasma membrane, unclear 84.15 84.43
TraesCS4A01G133800.1 Wheat plasma membrane 83.82 84.38
TraesCS4D01G173100.1 Wheat plasma membrane 83.71 84.27
TraesCS1A01G227300.1 Wheat plasma membrane 83.82 84.19
Os03t0333200-01 Rice plasma membrane 83.82 84.1
VIT_08s0040g00010.t01 Wine grape mitochondrion 38.73 80.51
GSMUA_Achr9P04860_001 Banana vacuole 58.26 73.31
GSMUA_Achr3P09730_001 Banana plasma membrane, vacuole 58.26 71.8
Solyc09g015830.1.1 Tomato plastid 51.12 70.57
GSMUA_Achr8P01710_001 Banana plasma membrane 68.53 69.07
CDY29022 Canola plasma membrane 60.38 67.37
KRH40710 Soybean endoplasmic reticulum 65.07 65.07
CDX90645 Canola plasma membrane 58.71 64.62
PGSC0003DMT400076840 Potato plasma membrane 64.06 64.57
CDY33271 Canola plasma membrane 61.5 64.37
CDX78012 Canola plasma membrane 61.05 64.28
AT3G51550.1 Thale cress plasma membrane 64.17 64.25
KRH00476 Soybean plasma membrane 64.06 64.21
Bra012850.1-P Field mustard plasma membrane 62.28 64.06
CDY16299 Canola plasma membrane 60.94 63.05
Os05t0318700-02 Rice plasma membrane 59.04 60.05
GSMUA_Achr10P... Banana cytosol, plasma membrane, plastid 30.02 59.51
Os01t0253000-01 Rice plasma membrane 27.12 55.61
Os05t0317700-01 Rice plasma membrane 52.01 55.41
Os05t0317900-01 Rice plasma membrane 51.34 54.37
Os05t0280700-01 Rice plasma membrane 51.23 52.82
Os05t0318600-01 Rice plasma membrane 30.8 48.94
CDX73714 Canola plasma membrane 61.27 46.68
GSMUA_Achr8P21410_001 Banana cytosol 48.44 46.37
Os06t0126250-01 Rice plasma membrane 41.18 43.67
Os04t0619600-01 Rice plasma membrane 40.62 43.13
Os07t0147600-01 Rice plasma membrane 39.29 41.46
Os03t0281500-01 Rice plasma membrane 38.17 40.76
Os06t0334300-01 Rice plasma membrane 39.06 40.75
Os03t0759600-00 Rice plasma membrane, plastid 40.51 40.7
Os03t0124200-01 Rice plasma membrane 35.71 37.74
Os10t0534500-01 Rice plasma membrane 35.16 37.32
Os01t0155500-01 Rice plasma membrane 36.94 35.36
Bra036791.1-P Field mustard cytosol 63.5 28.54
Os01t0253100-01 Rice plasma membrane 21.88 27.68
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:2.60.120.430Gene3D:3.30.200.20EntrezGene:4325600
ProteinID:BAB56062.1ProteinID:BAD53342.1ProteinID:BAF06286.1ProteinID:BAS74539.1ProteinID:BAS74540.1ProteinID:EEE55446.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_domEnsemblPlantsGene:Os01g0769700EnsemblPlants:Os01t0769700-01PFAM:PF07714
PFAM:PF12819ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51257PANTHER:PTHR27003
PANTHER:PTHR27003:SF53InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q94EF4SMART:SM00220SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00000ABBE6RefSeq:XP_015622126.1
SEG:seg:::::
Description
DWARF AND RUNTISH SPIKELET2Receptor-like kinase, Control of reproductive growth and development, Repression of cell death (Os01t0769700-01);Similar to predicted protein. (Os01t0769700-02)
Coordinates
chr1:+:32461878..32465030
Molecular Weight (calculated)
96364.3 Da
IEP (calculated)
6.266
GRAVY (calculated)
-0.109
Length
896 amino acids
Sequence
(BLAST)
001: MGSSRFVLLL LLLLAVAACV ARGQGGGNSS SAAAPAPAAG AGPFVPRDDI LLDCGATGKG NDTDGRVWSG DAGSKYAPAS LGSASAAGQD PSVPQVPYLT
101: ARVSAAPFTY SFPLGAGRKF LRLHFYPANY SSRDAADARF SVSVPAANVT LLSNFSAYQT ATALNFAYIV REFSVNVTTP TMELTFTPEK GHPNAYAFVN
201: GIEVVSSPDL FDISTPNLVT GDGNNQPFPI DAGTALQTMY RLNVGGQAIS PSKDTGGYRS WDDDSPYVFG AAFGVSYPKD DNVTIAYPSN VPEYVAPVDV
301: YATARSMGPD KNVNLAYNLT WIMQVDAGFT YLVRLHFCEI QYPITMINQR VFNIYINNQT AFQGADVIAW TNNNGIGSPV YQDFVVTTVG SGAMDLWVAL
401: YPDVQAKPQY YDAILNGLEV FKLPLSNGSL AGLNPVPTVE PSLDGGAVKK SSVGPIVGGV IGGLVVLALG YCCFMICKRR SRVGKDTGMS DGHSGWLPLS
501: LYGNSHSSGS AKSHTTGSYA SSLPSNLCRH FSFAEIKAAT NNFDESLLLG VGGFGKVYRG EIDGGVTKVA IKRGNPLSEQ GVHEFQTEIE MLSKLRHRHL
601: VSLIGYCEEK NEMILVYDYM AHGTLREHLY KTKNAPLTWR QRLEICIGAA RGLHYLHTGA KHTIIHRDVK TTNILLDEKW VAKVSDFGLS KTGPSMDHTH
701: VSTVVKGSFG YLDPEYFRRQ QLTEKSDVYS FGVVLFEVLC ARPALNPTLA KEEVSLAEWA LHCQKKGILD QIVDPHLKGK IAPQCFKKFA ETAEKCVSDE
801: GIDRPSMGDV LWNLEFALQM QESAEDSGSI GCGMSDEGTP LVMPGKKDPN DPSIESSTTT TTTTSISMGD QSVASIDSDG LTPSAVFSQI MNPKGR
Best Arabidopsis Sequence Match ( AT3G51550.1 )
(BLAST)
001: MKITEGRFRL SLLLLLLLIS AATLISAADY SPTEKILLNC GGGASNLTDT DNRIWISDVK SKFLSSSSED SKTSPALTQD PSVPEVPYMT ARVFRSPFTY
101: TFPVASGRKF VRLYFYPNSY DGLNATNSLF SVSFGPYTLL KNFSASQTAE ALTYAFIIKE FVVNVEGGTL NMTFTPESAP SNAYAFVNGI EVTSMPDMYS
201: STDGTLTMVG SSGSVTIDNS TALENVYRLN VGGNDISPSA DTGLYRSWYD DQPYIFGAGL GIPETADPNM TIKYPTGTPT YVAPVDVYST ARSMGPTAQI
301: NLNYNLTWIF SIDSGFTYLV RLHFCEVSSN ITKINQRVFT IYLNNQTAEP EADVIAWTSS NGVPFHKDYV VNPPEGNGQQ DLWLALHPNP VNKPEYYDSL
401: LNGVEIFKMN TSDGNLAGTN PIPGPQVTAD PSKVLRPTTR KSKSNTAIIA GAASGAVVLA LIIGFCVFGA YRRRKRGDYQ PASDATSGWL PLSLYGNSHS
501: AGSAKTNTTG SYASSLPSNL CRHFSFAEIK AATKNFDESR VLGVGGFGKV YRGEIDGGTT KVAIKRGNPM SEQGVHEFQT EIEMLSKLRH RHLVSLIGYC
601: EENCEMILVY DYMAHGTMRE HLYKTQNPSL PWKQRLEICI GAARGLHYLH TGAKHTIIHR DVKTTNILLD EKWVAKVSDF GLSKTGPTLD HTHVSTVVKG
701: SFGYLDPEYF RRQQLTEKSD VYSFGVVLFE ALCARPALNP TLAKEQVSLA EWAPYCYKKG MLDQIVDPYL KGKITPECFK KFAETAMKCV LDQGIERPSM
801: GDVLWNLEFA LQLQESAEEN GKGVCGDMDM DEIKYDDGNC KGKNDKSSDV YEGNVTDSRS SGIDMSIGGR SLASEDSDGL TPSAVFSQIM NPKGR
Arabidopsis Description
FERReceptor-like protein kinase FERONIA [Source:UniProtKB/Swiss-Prot;Acc:Q9SCZ4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.