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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • plasma membrane 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, plasma membrane
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
 plastid: 26371478
nucleus: 28394025
extracellular: 29876421
msms PMID: 28394025 doi
AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID: 26371478 doi
M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_08s0040g00010.t01 Wine grape mitochondrion 58.24 87.7
PGSC0003DMT400076840 Potato plasma membrane 98.15 71.65
Solyc07g063480.2.1 Tomato cytosol, nucleus, plasma membrane 31.28 66.78
Solyc06g005230.1.1 Tomato plastid 35.29 61.23
TraesCS4B01G003700.1 Wheat cytosol, plasma membrane, plastid 41.45 60.31
CDY29022 Canola plasma membrane 72.42 58.53
GSMUA_Achr10P... Banana cytosol, plasma membrane, plastid 40.52 58.19
CDX90645 Canola plasma membrane 70.88 56.51
KRH40710 Soybean endoplasmic reticulum 77.97 56.47
KRH00476 Soybean plasma membrane 77.66 56.38
Solyc05g013300.1.1 Tomato cytosol 27.89 56.04
Bra012850.1-P Field mustard plasma membrane 75.19 56.03
AT3G51550.1 Thale cress plasma membrane 76.12 55.2
CDY33271 Canola plasma membrane 72.42 54.91
CDX78012 Canola plasma membrane 71.49 54.52
CDY16299 Canola plasma membrane 71.34 53.46
GSMUA_Achr9P04860_001 Banana vacuole 58.24 53.09
Zm00001d029047_P001 Maize plasma membrane 71.8 52.6
TraesCS5B01G015200.1 Wheat cytosol, nucleus, peroxisome 49.0 52.56
Zm00001d047533_P001 Maize mitochondrion, plasma membrane 71.34 52.14
EER94913 Sorghum plasma membrane 71.65 51.96
Os03t0333200-01 Rice plasma membrane 70.72 51.4
Os01t0769700-01 Rice plasma membrane 70.57 51.12
HORVU4Hr1G050700.2 Barley plasma membrane 69.8 50.9
TraesCS5D01G094700.1 Wheat cytosol, peroxisome, plastid 47.0 50.83
TraesCS4A01G133800.1 Wheat plasma membrane 69.65 50.79
TraesCS4B01G171100.1 Wheat plasma membrane, unclear 69.8 50.73
TraesCS4D01G173100.1 Wheat plasma membrane 69.34 50.56
TraesCS1B01G241400.1 Wheat plasma membrane 69.49 50.56
HORVU1Hr1G059300.1 Barley plasma membrane 69.34 50.51
TraesCS1D01G228900.1 Wheat plasma membrane 69.49 50.5
GSMUA_Achr8P01710_001 Banana plasma membrane 69.03 50.39
TraesCS1A01G227300.1 Wheat plasma membrane 69.18 50.34
GSMUA_Achr3P09730_001 Banana plasma membrane, vacuole 55.32 49.38
Solyc03g059070.2.1 Tomato plasma membrane 35.44 48.12
Os05t0318700-02 Rice plasma membrane 62.1 45.74
Solyc01g059910.2.1 Tomato plastid 53.62 45.08
EES11497 Sorghum plasma membrane 60.55 44.81
TraesCS5D01G336300.1 Wheat plasma membrane 59.78 43.84
HORVU5Hr1G084100.1 Barley plasma membrane 59.48 43.62
TraesCS5B01G330700.1 Wheat plasma membrane 60.4 43.08
TraesCS5A01G330500.1 Wheat plasma membrane 60.4 43.03
Zm00001d002175_P001 Maize plasma membrane 58.24 42.14
TraesCS3B01G571500.1 Wheat plastid 52.85 42.09
TraesCS3A01G072500.1 Wheat plasma membrane 50.85 41.83
HORVU3Hr1G111040.1 Barley plasma membrane 53.62 41.68
Solyc07g008400.1.1 Tomato plasma membrane 53.93 40.98
Os05t0317700-01 Rice plasma membrane 53.0 40.9
Os05t0317900-01 Rice plasma membrane 53.31 40.9
Solyc06g009550.2.1 Tomato plasma membrane 45.15 40.36
TraesCS3D01G512100.1 Wheat plasma membrane 51.62 40.02
TraesCS3D01G072200.1 Wheat plasma membrane 51.93 40.02
TraesCS3B01G086500.1 Wheat plasma membrane 49.92 39.8
TraesCS3D01G072100.1 Wheat plasma membrane 51.16 39.71
TraesCS3B01G567500.1 Wheat plasma membrane 51.16 39.57
CDX73714 Canola plasma membrane 71.49 39.46
TraesCS4D01G004300.1 Wheat plasma membrane 50.23 39.42
HORVU1Hr1G088680.1 Barley plasma membrane 49.61 39.03
TraesCS3B01G086600.1 Wheat plasma membrane 48.84 38.94
Solyc06g009540.1.1 Tomato plasma membrane 53.0 38.78
TraesCSU01G060700.1 Wheat plasma membrane 49.46 38.72
OQU77260 Sorghum plasma membrane 48.23 38.5
Solyc10g006870.1.1 Tomato plasma membrane 49.31 38.1
HORVU4Hr1G000420.24 Barley cytosol, mitochondrion, plasma membrane, plastid 50.08 37.1
Solyc02g089090.2.1 Tomato plasma membrane 49.15 36.71
Solyc05g054680.1.1 Tomato plasma membrane 46.38 35.75
Solyc11g072910.1.1 Tomato plasma membrane 45.3 35.25
GSMUA_Achr8P21410_001 Banana cytosol 49.77 34.51
Solyc03g115710.1.1 Tomato plasma membrane 44.53 34.12
Solyc01g109950.2.1 Tomato plasma membrane 44.99 33.45
TraesCS3D01G511100.1 Wheat plasma membrane 31.59 32.64
Solyc05g054860.1.1 Tomato plasma membrane 38.83 31.07
Solyc03g044160.1.1 Tomato plasma membrane 38.37 30.48
Os05t0318600-01 Rice plasma membrane 25.58 29.43
Solyc02g069970.2.1 Tomato plasma membrane 30.2 29.34
Solyc10g054050.1.1 Tomato plasma membrane 35.13 28.68
Bra036791.1-P Field mustard cytosol 75.5 24.57
Solyc02g014030.1.1 Tomato plasma membrane 40.83 23.0
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:2.60.120.430Gene3D:3.30.200.20GO:GO:0000003
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005618GO:GO:0005623GO:GO:0005886GO:GO:0006464
GO:GO:0006468GO:GO:0006950GO:GO:0007154GO:GO:0007165GO:GO:0007275GO:GO:0008150
GO:GO:0008152GO:GO:0009506GO:GO:0009605GO:GO:0009607GO:GO:0009719GO:GO:0009723
GO:GO:0009741GO:GO:0009788GO:GO:0009791GO:GO:0009856GO:GO:0009987GO:GO:0010118
GO:GO:0010483GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0016049GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0030308GO:GO:0030312GO:GO:0040007
GO:GO:0043680GO:GO:0046777GO:GO:0048364GO:GO:0050832InterPro:IPR000719UniProt:K4CS51
EMBL:KY435602InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_domPFAM:PF07714PFAM:PF12819ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27003PANTHER:PTHR27003:SF53InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASEnsemblPlantsGene:Solyc09g015830.1EnsemblPlants:Solyc09g015830.1.1
TMHMM:TMhelixUniParc:UPI000276BF25SEG:seg:::
Description
Receptor-like protein kinase FERONIA [Source:Projected from Arabidopsis thaliana (AT3G51550) UniProtKB/Swiss-Prot;Acc:Q9SCZ4]
Coordinates
chr9:-:11274733..11276682
Molecular Weight (calculated)
71191.4 Da
IEP (calculated)
6.725
GRAVY (calculated)
-0.280
Length
649 amino acids
Sequence
(BLAST)
001: MFRSWGDDSN YIFGAATGVT NTADDENVTI TYGNGQPTYI APLDVYKTAR SMGPTFQINQ QFNLSWVFSV DSGFSYLVRL HFCEITRNIT KVNQRVFIIY
101: MNNQTAEPAA DVIAWADGNG IPFHKDYVVS VPRGASQQDL WLALHPNVAS KSNWYDAILN GIEIFKVSDT NNNLAGPNPV PVAEPDHIDP LPSKTGESKN
201: NKSAIGGGVG GGIAAVVLIG LVACLVMHRR NRGKVQSPSD GPSGWLPLSL YGNSHTSGSA KTNTTGSYAS SLPSNLCRHF SFAEIKAATN NFDEALLLGV
301: GGFGKVYQGE IDGGTKVAIK RGNPLSEQGV HEFQTEIEML SKLRHRHLVS LIGYCEENCE MILVYDYMAH GTLREHLYKT QKPPLPWKQR LEICIGAARG
401: LHYLHTGAKH TIIHRDVKTT NILLDEKWVA KVSDFGLSKT GPTLDHTHVS TVVKGSFGYL DPEYFRRQQL TDKSDVYSFG VVLFEILCAR PALNPTLPKE
501: QVSLAEWAFH CYKKGTFDQI IDPYLKGKLA PECLKKFTET AVKCVSDVGV DRPSMGDVLW NLEFALQLQE SAEECGKGFG KMDIEEGFDN VTCKGKKDLN
601: ESPGYDASMT DSRSSGISMS IGGRSLASED SDGLTPSAVF SQIMNPKGR
Best Arabidopsis Sequence Match ( AT3G51550.1 )
(BLAST)
001: MKITEGRFRL SLLLLLLLIS AATLISAADY SPTEKILLNC GGGASNLTDT DNRIWISDVK SKFLSSSSED SKTSPALTQD PSVPEVPYMT ARVFRSPFTY
101: TFPVASGRKF VRLYFYPNSY DGLNATNSLF SVSFGPYTLL KNFSASQTAE ALTYAFIIKE FVVNVEGGTL NMTFTPESAP SNAYAFVNGI EVTSMPDMYS
201: STDGTLTMVG SSGSVTIDNS TALENVYRLN VGGNDISPSA DTGLYRSWYD DQPYIFGAGL GIPETADPNM TIKYPTGTPT YVAPVDVYST ARSMGPTAQI
301: NLNYNLTWIF SIDSGFTYLV RLHFCEVSSN ITKINQRVFT IYLNNQTAEP EADVIAWTSS NGVPFHKDYV VNPPEGNGQQ DLWLALHPNP VNKPEYYDSL
401: LNGVEIFKMN TSDGNLAGTN PIPGPQVTAD PSKVLRPTTR KSKSNTAIIA GAASGAVVLA LIIGFCVFGA YRRRKRGDYQ PASDATSGWL PLSLYGNSHS
501: AGSAKTNTTG SYASSLPSNL CRHFSFAEIK AATKNFDESR VLGVGGFGKV YRGEIDGGTT KVAIKRGNPM SEQGVHEFQT EIEMLSKLRH RHLVSLIGYC
601: EENCEMILVY DYMAHGTMRE HLYKTQNPSL PWKQRLEICI GAARGLHYLH TGAKHTIIHR DVKTTNILLD EKWVAKVSDF GLSKTGPTLD HTHVSTVVKG
701: SFGYLDPEYF RRQQLTEKSD VYSFGVVLFE ALCARPALNP TLAKEQVSLA EWAPYCYKKG MLDQIVDPYL KGKITPECFK KFAETAMKCV LDQGIERPSM
801: GDVLWNLEFA LQLQESAEEN GKGVCGDMDM DEIKYDDGNC KGKNDKSSDV YEGNVTDSRS SGIDMSIGGR SLASEDSDGL TPSAVFSQIM NPKGR
Arabidopsis Description
FERReceptor-like protein kinase FERONIA [Source:UniProtKB/Swiss-Prot;Acc:Q9SCZ4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.