Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • nucleus 2
  • plastid 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002175_P001 Maize plasma membrane 85.29 83.39
Os05t0318700-02 Rice plasma membrane 76.51 76.16
HORVU5Hr1G084100.1 Barley plasma membrane 73.77 73.11
TraesCS5D01G336300.1 Wheat plasma membrane 73.2 72.54
TraesCS5B01G330700.1 Wheat plasma membrane 73.66 70.99
TraesCS5A01G330500.1 Wheat plasma membrane 73.32 70.58
VIT_08s0040g00010.t01 Wine grape mitochondrion 32.95 67.05
OQU77260 Sorghum plasma membrane 59.64 64.33
Solyc09g015830.1.1 Tomato plastid 44.81 60.55
EER94913 Sorghum plasma membrane 58.95 57.77
CDY29022 Canola plasma membrane 51.2 55.92
CDX90645 Canola plasma membrane 50.63 54.55
PGSC0003DMT400076840 Potato plasma membrane 54.96 54.22
CDX78012 Canola plasma membrane 52.45 54.05
CDY33271 Canola plasma membrane 52.0 53.27
AT3G51550.1 Thale cress plasma membrane 54.05 52.96
Bra012850.1-P Field mustard plasma membrane 52.57 52.93
KRH40710 Soybean endoplasmic reticulum 53.82 52.68
KRH00476 Soybean plasma membrane 53.59 52.57
CDY16299 Canola plasma membrane 51.43 52.08
EES17952 Sorghum plasma membrane 50.17 50.57
OQU86611 Sorghum cytosol 44.47 48.03
KXG20506 Sorghum plasma membrane 39.91 41.62
KXG34391 Sorghum plasma membrane 39.68 41.09
KXG37500 Sorghum plasma membrane 39.57 41.07
EES12876 Sorghum plasma membrane 39.34 40.73
EER89103 Sorghum plasma membrane 40.02 40.67
EES17770 Sorghum plasma membrane 36.83 38.68
CDX73714 Canola plasma membrane 51.77 38.61
EER95065 Sorghum plasma membrane 38.31 38.49
EER95602 Sorghum plasma membrane 37.17 38.04
OQU81104 Sorghum plasma membrane, vacuole 29.76 36.4
KXG31830 Sorghum plasma membrane 32.61 32.76
Bra036791.1-P Field mustard cytosol 53.14 23.37
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:2.60.120.430Gene3D:3.30.200.20EntrezGene:8066853
UniProt:C5YGN6EnsemblPlants:EES11497ProteinID:EES11497ProteinID:EES11497.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_domPFAM:PF07714PFAM:PF12819ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27003PANTHER:PTHR27003:SF78InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
EnsemblPlantsGene:SORBI_3006G228700SUPFAM:SSF56112unigene:Sbi.20246InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0001A86D32RefSeq:XP_002447169.1SEG:seg::
Description
hypothetical protein
Coordinates
chr6:+:57314078..57318035
Molecular Weight (calculated)
95675.8 Da
IEP (calculated)
6.468
GRAVY (calculated)
-0.187
Length
877 amino acids
Sequence
(BLAST)
001: MAHPTLSATL RCLTLLCILA LAVAADNNTI GSGQIRLDCG ATSPTGPDAD GRSWDSDTNS KFAPALKGIA ATASYQDSSL PSATPYMTAR IFTSNYTYSF
101: PVSPGCMFVR LYFYPTNYVS NHAAADAYFG VTAGNLTLLY DFNASQTAAA VTPVSVAFFV REYYINVTEG SLNLTFSPST HHNGSYAFIN GIEIVPTPDL
201: FTTPKPTLVN GGNMDLAGTG FQTMYRLNVG GQAIPPQGDV DFYRSWGDDS FYIYASDYGV TFGKDNNLTI TYTPSVPNYT APFNVYATAR SMGPNAQINL
301: NHNLTWILPV DAGFYYLLRF HFCEIQYPIT KVNQRSFFIY INNQTAQQQM DVIAFSGGIG NTVYRDYVTI TAGSGQTDLW VALHPDLSTR PEYFDAILNG
401: LEVFKLQNYG NNSLNGLNPP LPSVETNNGK SSGRNKSSVP AIVGGAVGGF AALLIAFIGV CIICRRKEVA KESGKPDDGQ WTPLTDYSKS RSNTSGKTTT
501: TGSRTSTLPS NLCRHFSFGE IQAATNNFDQ TSLLGKGGFG NVYLGEIDSG TMVAIKRGNP TSEQGVHEFQ TEIEMLSKLR HRHLVSLIGY CDDMNEMILV
601: YDYMANGTLR EHLYNTKKPA LSWKKRLEIC IGAARGLHYL HTGAKHTIIH RDVKTTNILL DDKLVAKVSD FGLSKTSPNV DNTHVSTVVK GSFGYLDPEY
701: FRRQQLTEKS DVYSFGVVLF EVLCARPALS PSLPKEQVSL ADWALHSQKK GILGQIIDPY LQGKISPQCF MKFAETAEKC VADHSIDRPS MADVLWNLEF
801: ALQLQESAED SSSVTDGTSS NTSPLTILRL HSDEPTTDTT TTTSTSMSMT GRSLASVDSD GLTPSSVFSQ LMHPGGR
Best Arabidopsis Sequence Match ( AT3G51550.1 )
(BLAST)
001: MKITEGRFRL SLLLLLLLIS AATLISAADY SPTEKILLNC GGGASNLTDT DNRIWISDVK SKFLSSSSED SKTSPALTQD PSVPEVPYMT ARVFRSPFTY
101: TFPVASGRKF VRLYFYPNSY DGLNATNSLF SVSFGPYTLL KNFSASQTAE ALTYAFIIKE FVVNVEGGTL NMTFTPESAP SNAYAFVNGI EVTSMPDMYS
201: STDGTLTMVG SSGSVTIDNS TALENVYRLN VGGNDISPSA DTGLYRSWYD DQPYIFGAGL GIPETADPNM TIKYPTGTPT YVAPVDVYST ARSMGPTAQI
301: NLNYNLTWIF SIDSGFTYLV RLHFCEVSSN ITKINQRVFT IYLNNQTAEP EADVIAWTSS NGVPFHKDYV VNPPEGNGQQ DLWLALHPNP VNKPEYYDSL
401: LNGVEIFKMN TSDGNLAGTN PIPGPQVTAD PSKVLRPTTR KSKSNTAIIA GAASGAVVLA LIIGFCVFGA YRRRKRGDYQ PASDATSGWL PLSLYGNSHS
501: AGSAKTNTTG SYASSLPSNL CRHFSFAEIK AATKNFDESR VLGVGGFGKV YRGEIDGGTT KVAIKRGNPM SEQGVHEFQT EIEMLSKLRH RHLVSLIGYC
601: EENCEMILVY DYMAHGTMRE HLYKTQNPSL PWKQRLEICI GAARGLHYLH TGAKHTIIHR DVKTTNILLD EKWVAKVSDF GLSKTGPTLD HTHVSTVVKG
701: SFGYLDPEYF RRQQLTEKSD VYSFGVVLFE ALCARPALNP TLAKEQVSLA EWAPYCYKKG MLDQIVDPYL KGKITPECFK KFAETAMKCV LDQGIERPSM
801: GDVLWNLEFA LQLQESAEEN GKGVCGDMDM DEIKYDDGNC KGKNDKSSDV YEGNVTDSRS SGIDMSIGGR SLASEDSDGL TPSAVFSQIM NPKGR
Arabidopsis Description
FERReceptor-like protein kinase FERONIA [Source:UniProtKB/Swiss-Prot;Acc:Q9SCZ4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.