CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 2
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046838_P002	Maize	plasma membrane	96.31	96.2
Os06t0334300-01	Rice	plasma membrane	87.99	86.15
TraesCS7B01G241900.1	Wheat	plasma membrane	85.85	84.64
TraesCS7A01G340700.1	Wheat	plasma membrane, plastid	86.09	84.58
HORVU7Hr1G081590.1	Barley	plasma membrane, plastid	86.09	84.58
TraesCS7D01G338800.3	Wheat	plastid	85.97	82.07
CDY49572	Canola	cytosol	26.4	75.77
Solyc06g005230.1.1	Tomato	plastid	32.58	73.26
PGSC0003DMT400043793	Potato	cytosol, plastid	25.09	65.33
KRH24985	Soybean	plasma membrane	61.71	62.01
Solyc05g013300.1.1	Tomato	cytosol	23.66	61.61
KRG88684	Soybean	plasma membrane	59.33	61.53
Bra033826.1-P	Field mustard	cytosol, plasma membrane, plastid	51.84	60.39
KRH10340	Soybean	plasma membrane	53.15	60.32
EES17770	Sorghum	plasma membrane	59.57	60.0
PGSC0003DMT400035099	Potato	cytosol	26.99	59.89
CDX99115	Canola	plasma membrane	57.55	59.24
VIT_06s0004g03920.t01	Wine grape	plasma membrane	57.19	58.73
CDX86076	Canola	plasma membrane	56.96	58.56
Bra018214.1-P	Field mustard	plasma membrane	57.79	58.34
Solyc11g072910.1.1	Tomato	plasma membrane	57.43	57.91
PGSC0003DMT400043784	Potato	cytosol	24.85	57.89
CDX68370	Canola	plasma membrane	56.36	57.8
AT3G46290.1	Thale cress	plasma membrane	56.96	57.71
PGSC0003DMT400040185	Potato	plasma membrane	56.84	57.31
CDX82981	Canola	plasma membrane	56.6	57.07
PGSC0003DMT400025093	Potato	plasma membrane	56.24	57.06
CDX80236	Canola	plasma membrane	53.86	56.06
AT5G59700.1	Thale cress	plasma membrane	54.7	55.49
Bra002541.1-P	Field mustard	plasma membrane	53.75	54.52
EER95065	Sorghum	plasma membrane	55.05	53.04
VIT_13s0067g03780.t01	Wine grape	plasma membrane	51.84	52.72
Solyc05g054860.1.1	Tomato	plasma membrane	47.8	49.57
PGSC0003DMT400060442	Potato	plasma membrane	48.04	49.39
KXG37500	Sorghum	plasma membrane	46.73	46.51
EER89103	Sorghum	plasma membrane	45.54	44.38
CDY07654	Canola	plasma membrane	43.16	44.32
Bra000130.1-P	Field mustard	plasma membrane	43.04	44.25
CDY24966	Canola	plasma membrane	42.93	44.19
AT2G39360.1	Thale cress	plasma membrane	42.69	44.05
KXG31830	Sorghum	plasma membrane	45.07	43.41
EER95602	Sorghum	plasma membrane	42.21	41.42
EES12876	Sorghum	plasma membrane	40.31	40.02
EES11497	Sorghum	plasma membrane	41.62	39.91
OQU77260	Sorghum	plasma membrane	38.29	39.61
EES17952	Sorghum	plasma membrane	40.9	39.54
EER94913	Sorghum	plasma membrane	41.97	39.44
OQU86611	Sorghum	cytosol	37.46	38.79
OQU81104	Sorghum	plasma membrane, vacuole	32.82	38.49
KXG34391	Sorghum	plasma membrane	38.41	38.13

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:2.60.120.430	Gene3D:3.30.200.20	UniProt:A0A194YLN6
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KXG20506	ProteinID:KXG20506	ProteinID:KXG20506.1	InterPro:Kinase-like_dom_sf
InterPro:Malectin-like_Carb-bd_dom	PFAM:PF07714	PFAM:PF12819	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27003	PANTHER:PTHR27003:SF94	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3010G211800
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0007F31950
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:55478177..55481282

Molecular Weight (calculated)

92399.3 Da

IEP (calculated)

6.936

GRAVY (calculated)

-0.096

Length

841 amino acids

Sequence
(BLAST)

001: MMATLGRKKW QAVTTFIVLC ILSSICICKA QFKPADSYLV DCGSSKSTMV GQRTFAADGA SPVKVSTSQD ILAGTSANGV ASFDNSALYQ TARIFTGPSS
101: YTFPIQKQGR HFVRFYFFPF TYQSYDLSLA KFTVSTQDVL LLSDFQQPDK TAPLFKEYSL NITRDTLVIS FKPSNGIAFV NAIEVISVPD DLIADNAQMV
201: NPVQQYTGLS TQPLETVYRV NMGGPKVTPD NDTLSRTWVT DGKYLLNPAV TKNVLYGKDV NYKKGLATQL TAPDIVYGTA TELAASSNTS NAVFNMTWQF
301: DVDAGFSYLV RFHFCDIVSK ALNQLYFNAY VGGFSAQTNL DLSTMSESQL ATPVYIDVVL SSNDASSKLG ISIGPSTLDN VLTDGILNGL EVMKISTGGS
401: AFTVGSGSGN KNWGVILGAA LGGVGLFIIV VVLVLLCRRK KTLEKQHSKT WMPFSINGLT SLSTGSRTSY GTTLTSGLNG SYGYRFAFSV LQEATNNFDE
501: NWVIGVGGFG KVYKGVMRDE TKVAVKRGNP KSQQGLNEFR TEIELLSRLR HRHLVSLIGY CDERNEMILV YEYMEKGTLK SHLYGSDNPS LNWKQRLEVC
601: IGAARGLHYL HTGSAKAIIH RDVKSANILL DENLLAKVAD FGLSKTGPEL DQTHVSTAVK GSFGYLDPEY FRRQQLTEKS DVYSFGVVLL EVLCARPVID
701: PTLPREMVNL AEWGMKWQKR GELHQIIDQR ISGTIRPDSL RKFGETVEKC LADYGVERPS MGDVLWNLEY VLQLQDADST VSDVNSMNRI VELPSQVQNV
801: GALESISVTM AEAGASNEPD HDLSDVSMSR VFSQLIKAEG R

Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)

001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR

Arabidopsis Description

HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.