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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002541.1-P Field mustard plasma membrane 98.98 34.98
GSMUA_Achr9P04140_001 Banana plasma membrane 65.87 33.8
CDX80236 Canola plasma membrane 92.83 33.66
CDY43041 Canola cytosol 68.26 33.22
AT5G59700.1 Thale cress plasma membrane 92.49 32.69
CDX82981 Canola plasma membrane 87.37 30.7
CDX68370 Canola plasma membrane 85.32 30.49
CDX99115 Canola plasma membrane 84.64 30.36
CDX86076 Canola plasma membrane 84.64 30.32
CDY46084 Canola mitochondrion, plasma membrane, plastid 57.0 30.09
GSMUA_Achr11P... Banana cytosol 56.66 28.23
KXG20506 Sorghum plasma membrane 75.77 26.4
Zm00001d046838_P002 Maize plasma membrane 75.77 26.37
Os06t0334300-01 Rice plasma membrane 75.77 25.84
HORVU7Hr1G081590.1 Barley plasma membrane, plastid 75.43 25.82
TraesCS7B01G241900.1 Wheat plasma membrane 75.09 25.79
TraesCS7A01G340700.1 Wheat plasma membrane, plastid 75.09 25.7
TraesCS1D01G110900.1 Wheat plasma membrane 69.97 25.59
CDY43828 Canola plasma membrane 68.6 25.06
TraesCS7D01G338800.3 Wheat plastid 75.09 24.97
HORVU1Hr1G024070.1 Barley plasma membrane 70.31 24.49
CDY09559 Canola cytosol, plasma membrane, plastid 61.09 24.29
CDY63832 Canola plasma membrane 70.65 24.27
TraesCS1B01G130300.2 Wheat plasma membrane 69.97 24.26
TraesCS1A01G108100.1 Wheat plasma membrane 69.28 24.05
Zm00001d037544_P001 Maize plasma membrane 68.6 24.04
EES17770 Sorghum plasma membrane 68.26 23.95
Os03t0281500-01 Rice plasma membrane 67.58 23.6
CDY24966 Canola plasma membrane 63.82 22.89
CDY07654 Canola plasma membrane 63.82 22.83
Zm00001d028686_P001 Maize plasma membrane 66.21 22.8
HORVU4Hr1G058220.1 Barley plasma membrane 65.53 22.78
TraesCS4B01G201600.1 Wheat plasma membrane 64.85 22.41
TraesCS4D01G202300.1 Wheat plasma membrane 64.85 22.38
TraesCS4A01G102900.1 Wheat plasma membrane 64.85 22.38
EER95065 Sorghum plasma membrane 66.55 22.34
CDX88063 Canola plasma membrane 63.14 22.32
GSMUA_Achr5P28470_001 Banana plasma membrane 35.49 22.27
CDX80402 Canola plasma membrane 62.8 22.17
CDX87209 Canola plasma membrane 62.8 21.96
CDY41962 Canola plasma membrane 63.82 21.77
CDX72717 Canola plasma membrane 63.14 21.64
CDY56768 Canola plasma membrane 63.14 21.64
CDX90312 Canola plasma membrane 63.14 21.59
CDY12121 Canola plasma membrane 63.14 21.59
CDY29022 Canola plasma membrane 59.04 21.54
CDY15889 Canola plasma membrane 62.8 21.52
CDX99588 Canola plasma membrane 62.8 21.5
CDX90645 Canola plasma membrane 59.04 21.25
CDY67402 Canola plasma membrane 52.9 21.2
CDY02307 Canola plasma membrane 61.09 20.98
CDX76865 Canola plasma membrane 57.0 20.62
CDX78012 Canola plasma membrane 59.39 20.45
CDY33271 Canola plasma membrane 58.7 20.09
CDY21480 Canola plasma membrane 57.0 19.9
CDY33885 Canola plasma membrane 57.0 19.86
CDX86206 Canola plasma membrane 57.34 19.56
CDY05602 Canola plasma membrane 56.66 19.44
CDY16299 Canola plasma membrane 57.34 19.4
Os01t0155500-01 Rice plasma membrane 58.02 18.16
CDY37884 Canola cytosol 53.24 17.99
CDX78036 Canola plasma membrane 52.56 17.76
TraesCS3D01G134400.1 Wheat plasma membrane 54.61 17.74
HORVU3Hr1G086590.1 Barley plasma membrane 54.61 17.7
CDX74492 Canola plasma membrane 53.24 17.63
TraesCS3A01G308100.1 Wheat mitochondrion, plasma membrane 54.61 17.62
TraesCS3B01G151200.1 Wheat mitochondrion, plasma membrane 54.61 17.6
CDY36996 Canola plasma membrane 52.22 17.55
KXG31830 Sorghum plasma membrane 52.22 17.53
HORVU3Hr1G024950.4 Barley plasma membrane 54.61 16.99
CDY37883 Canola plasma membrane 45.05 16.65
CDY42608 Canola plasma membrane 35.84 15.44
CDX73714 Canola plasma membrane 59.39 14.8
CDY26624 Canola plasma membrane 50.17 10.27
CDY48660 Canola plasma membrane 5.12 2.56
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:3.30.200.20GO:A0A078II08UniProt:A0A078II08
EnsemblPlants:CDY49572ProteinID:CDY49572ProteinID:CDY49572.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00093301001
InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF07714PIRSF:PIRSF000654ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27003PANTHER:PTHR27003:SF94InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE5723::::
Description
BnaA10g12680DBnaA10g12680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078II08]
Coordinates
chrLK032843:-:61932..62858
Molecular Weight (calculated)
33216.4 Da
IEP (calculated)
4.698
GRAVY (calculated)
-0.420
Length
293 amino acids
Sequence
(BLAST)
001: MLSQFRHRHL VSLIGYCDEN REMILVYEYM ENGTLKSHLY GSGLPTLSWK QRLEICIGSA RGLHYLHTGD SKSVIHRDVK SANILLDENL MAKVADFGLS
101: KTGPEIDQTH VSTAVKGSFG YLDPEYFRRQ QLTEKSDVYS FGVVMFEVLC ARPVIDPTLP REMVNLAEWA MKWQKKGQLE HVIDQSLRGE IVPDSLRKFG
201: ETGEKCLADY GVDRPSMGDV LWNLEYALQL QEAGVDCDQE DDNSTNMIGE LPLRFNDYNN LGDTREEEES CVDDLSGVSM SKVFSQLVKS EGR
Best Arabidopsis Sequence Match ( AT2G39360.1 )
(BLAST)
001: MINLKLFLEL KLCFLITLLC SSHISSVSDT FFINCGSPTN VTVNNRTFVS DNNLVQGFSV GTTDSNSGDE STLFQTARVF SDESSSTYRF PIEEHGWFLI
101: RIYFLPLVSA SQDLTTARFS VSAQNFTLIR EYKPSTTSVV REYILNVTTD SLLLQFLPRT GSVSFINALE VLRLPETLIP EDAKLIGTQK DLKLSSHAME
201: TVSRVNMGNL SVSRDQDKLW RQWDSDSAYK AHFGTPVMNL KAVNFSAGGI TDDIAPVYVY GTATRLNSDL DPNTNANLTW TFKVEPGFDY FVRFHFCNII
301: VDPFGFERQI RFDIFVNSEK VRTIDMTEVL NGTFGAPFFV DAVMRKAKSR EGFLNLSIGL VMDVSSYPVS FINGFEISKL SNDKRSLDAF DAILPDGSSS
401: NKSSNTSVGL IAGLSAALCV ALVFGVVVSW WCIRKRRRRN RQMQTVHSRG DDHQIKKNET GESLIFSSSK IGYRYPLALI KEATDDFDES LVIGVGGFGK
501: VYKGVLRDKT EVAVKRGAPQ SRQGLAEFKT EVEMLTQFRH RHLVSLIGYC DENSEMIIVY EYMEKGTLKD HLYDLDDKPR LSWRQRLEIC VGAARGLHYL
601: HTGSTRAIIH RDVKSANILL DDNFMAKVAD FGLSKTGPDL DQTHVSTAVK GSFGYLDPEY LTRQQLTEKS DVYSFGVVML EVVCGRPVID PSLPREKVNL
701: IEWAMKLVKK GKLEDIIDPF LVGKVKLEEV KKYCEVTEKC LSQNGIERPA MGDLLWNLEF MLQVQAKDEK AAMVDDKPEA SVVGSTMQFS VNGVGDIAGV
801: SMSKVFAQMV REETR
Arabidopsis Description
Probable receptor-like protein kinase At2g39360 [Source:UniProtKB/Swiss-Prot;Acc:O80623]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.