CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90312	Canola	plasma membrane	98.83	98.83
CDY42608	Canola	plasma membrane	72.58	91.47
CDY41962	Canola	plasma membrane	91.6	91.39
CDY56768	Canola	plasma membrane	91.02	91.23
AT4G39110.1	Thale cress	plasma membrane	93.23	91.0
CDX72717	Canola	plasma membrane	90.78	90.99
CDY15889	Canola	plasma membrane	81.91	82.11
CDX99588	Canola	plasma membrane	81.91	82.01
VIT_03s0038g04340.t01	Wine grape	plasma membrane	69.54	70.45
KRH20802	Soybean	plasma membrane	66.04	65.13
KRH27450	Soybean	plasma membrane	66.51	64.92
CDY49572	Canola	cytosol	21.59	63.14
Os06t0126250-01	Rice	plasma membrane	60.44	61.3
GSMUA_Achr7P20760_001	Banana	plasma membrane	49.12	60.75
GSMUA_Achr4P09870_001	Banana	plasma membrane	45.74	59.39
Solyc01g109950.2.1	Tomato	plasma membrane	59.98	58.88
Zm00001d045515_P001	Maize	plasma membrane	58.34	58.75
PGSC0003DMT400094265	Potato	plasma membrane	59.74	58.65
TraesCS7D01G050100.1	Wheat	plasma membrane	57.53	58.41
GSMUA_AchrUn_...	Banana	plasma membrane, vacuole	48.31	58.31
EER89103	Sorghum	plasma membrane	58.69	58.29
TraesCS7A01G055000.1	Wheat	plasma membrane	57.41	58.22
TraesCS4A01G441600.1	Wheat	plasma membrane	57.29	58.18
HORVU7Hr1G010130.1	Barley	plasma membrane	57.06	57.94
PGSC0003DMT400008766	Potato	plasma membrane	57.64	56.65
CDX87209	Canola	plasma membrane	54.03	55.25
Solyc10g054050.1.1	Tomato	plasma membrane	51.23	55.22
CDY43041	Canola	cytosol	36.29	51.66
CDY67402	Canola	plasma membrane	42.12	49.38
Zm00001d035992_P001	Maize	plasma membrane	57.06	49.15
CDY43828	Canola	plasma membrane	45.27	48.38
CDX68370	Canola	plasma membrane	46.09	48.17
CDX99115	Canola	plasma membrane	45.86	48.1
CDX86076	Canola	plasma membrane	45.74	47.92
CDX82981	Canola	plasma membrane	46.44	47.72
CDY63832	Canola	plasma membrane	47.02	47.24
CDX80236	Canola	plasma membrane	44.11	46.78
CDX88063	Canola	plasma membrane	43.76	45.24
CDX80402	Canola	plasma membrane	43.06	44.46
CDY29022	Canola	plasma membrane	40.61	43.34
CDX90645	Canola	plasma membrane	40.26	42.38
CDY09559	Canola	cytosol, plasma membrane, plastid	36.41	42.33
CDY33271	Canola	plasma membrane	41.31	41.36
CDX78012	Canola	plasma membrane	40.84	41.13
CDY46084	Canola	mitochondrion, plasma membrane, plastid	26.6	41.08
CDY16299	Canola	plasma membrane	41.31	40.88
CDY02307	Canola	plasma membrane	40.02	40.21
CDY33885	Canola	plasma membrane	38.51	39.24
CDY05602	Canola	plasma membrane	38.62	38.76
CDX86206	Canola	plasma membrane	38.62	38.53
CDY07654	Canola	plasma membrane	36.76	38.46
CDY24966	Canola	plasma membrane	36.64	38.43
CDX76865	Canola	plasma membrane	35.47	37.53
CDY21480	Canola	plasma membrane	36.41	37.19
CDY37883	Canola	plasma membrane	33.84	36.57
CDY37884	Canola	cytosol	35.82	35.41
CDY36996	Canola	plasma membrane	35.12	34.52
CDX78036	Canola	plasma membrane	34.89	34.49
CDX74492	Canola	plasma membrane	35.36	34.24
CDY48660	Canola	plasma membrane	20.77	30.43
CDX73714	Canola	plasma membrane	41.19	30.02
CDY26624	Canola	plasma membrane	34.07	20.39

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:2.60.120.430	Gene3D:3.30.200.20	GO:A0A078FFW3
UniProt:A0A078FFW3	EnsemblPlants:CDY12121	ProteinID:CDY12121	ProteinID:CDY12121.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00061111001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
InterPro:Malectin-like_Carb-bd_dom	PFAM:PF07714	PFAM:PF12819	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27003	PANTHER:PTHR27003:SF243	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EEA490	SEG:seg

Description

BnaC03g60370DBnaC03g60370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FFW3]

Coordinates

chrLK032017:-:711235..713808

Molecular Weight (calculated)

94370.2 Da

IEP (calculated)

5.742

GRAVY (calculated)

-0.185

Length

857 amino acids

Sequence
(BLAST)

001: MCLLLAILLF LSGLDVSTVT AAVGPATGFK PADDILIDCG SKSSSKNPDG RVFKSDQETV QYIEAKDDIQ VSAPPSDKVA SPIYLTARIF REEATYKFHL
101: TRPGWHWVRL HFLAFTNDKF DLQQATFSVM TEKYVLLHNF KISNNNNDSQ AVLQKEYLVN ITDAQFSLRF RPMKSSAAFI NAIEVVSAPD ELISDSGTAL
201: FPVNGFSGLS DYAYQSVYRV NVGGPLIVPQ NDTLGRTWIP DKEFLKEENM AKDVKTTPSA IKYPPGVTPL IAPQTVYATA AEMANSHTIA PNFNVSWNFP
301: SNPSFNYLIR LHFCDIVSKS LNDLYFNVYI NGKTAISGLD LSTVAGDLAT PYYKDIVVNA TLMTPELQVQ IGPMGEDTGA QNAILNGVEV LKMSNSVNSL
401: DGEFGVDGRT TGMGKHGMVA TAGFVMMFGA FIGLGAMVYR WKKRPQDWQK RNSFSSWLLP IHAGDTTFMT SKGGSQKSNF YNSTMGLGRY FSLSELQEAT
501: KNFEASQIIG VGGFGNVYIA TLDDGTKVAV KRGNPQSEQG ITEFETEIQM LSKLRHRHLV SLIGYCDENS EMILVYEFMS NGPFRDHLYG KNLAPLTWKQ
601: RLEICIGSAR GLHYLHTGTA QGIIHRDVKS TNILLDDALV AKVADFGLSK DVAFGQNHVS TAVKGSFGYL DPEYFRRQQL TDKSDVYSFG VVLLEALCAR
701: PAINPQLPRE QVNLAEWAMQ WKRKGLLEKI IDPHLAGTIN PESMKKFAEA AEKCLEDYGV DRPTMGDVLW NLEYALQLQE AFTQGKAEET EIDKPVTPGS
801: VLPTATTPIT PSATTNAEAS VQVASKVEET DGSVHSQTVD EHSGTAMFTQ FASLNGR

Best Arabidopsis Sequence Match ( AT4G39110.1 )
(BLAST)

001: MEIRKKPNIF TVLVIDFSSK PSMALLLAIL LFLSGPSASA VAAAAVGPAT GFKPADDILI DCGSKSSSKT PDGRVFKSDQ ETIQYIEAKE DIQVSAPPSD
101: KVASPIYLTA RIFREEATYK FHLTRPGWHW VRLHFLAFPN DKFDLQQATF SVLTEKYVLL HNFKISNNNN DSQAAVQKEY LVNMTDAQFA LRFRPMKSSA
201: AFINAIEVVS APDELISDSG TALFPVIGFS GLSDYAYQSV YRVNVGGPLI MPQNDTLGRT WIPDKEFLKD ENLAKDVKTT PSAIKYPPEV TPLIAPQTVY
301: ATAVEMANSL TIDPNFNVSW NFPSNPSFNY LIRLHFCDIV SKSLNDLYFN VYINGKTAIS GLDLSTVAGN LAAPYYKDIV VNATLMGPEL QVQIGPMGED
401: TGTKNAILNG VEVLKMSNSV NSLDGEFGVD GRTTGMGKHG MVATAGFVMM FGAFIGLGAM VYKWKKRPQD WQKRNSFSSW LLPIHAGDST FMTSKGGSQK
501: SNFYNSTLGL GRYFSLSELQ EATKNFEASQ IIGVGGFGNV YIGTLDDGTK VAVKRGNPQS EQGITEFQTE IQMLSKLRHR HLVSLIGYCD ENSEMILVYE
601: FMSNGPFRDH LYGKNLAPLT WKQRLEICIG SARGLHYLHT GTAQGIIHRD VKSTNILLDE ALVAKVADFG LSKDVAFGQN HVSTAVKGSF GYLDPEYFRR
701: QQLTDKSDVY SFGVVLLEAL CARPAINPQL PREQVNLAEW AMQWKRKGLL EKIIDPHLAG TINPESMKKF AEAAEKCLED YGVDRPTMGD VLWNLEYALQ
801: LQEAFTQGKA EETENAKPDV VTPGSVPVSD PSPITPSVTT NEAATVPVPA KVEENSGTAV DEHSGTAMFT QFANLNGR

Arabidopsis Description

Probable receptor-like protein kinase At4g39110 [Source:UniProtKB/Swiss-Prot;Acc:Q9T020]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.