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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • cytosol 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
  • golgi 3
  • mitochondrion 3
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:mitochondrion
Plant-mPloc:cytosol, mitochondrion, nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 plasma membrane: 27800704
plasma membrane: 28056797
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d045515_P001 Maize plasma membrane 81.3 80.73
EER89103 Sorghum plasma membrane 81.3 79.61
HORVU7Hr1G010130.1 Barley plasma membrane 74.2 74.29
TraesCS4A01G441600.1 Wheat plasma membrane 73.85 73.93
TraesCS7D01G050100.1 Wheat plasma membrane 73.85 73.93
TraesCS7A01G055000.1 Wheat plasma membrane 73.85 73.85
Zm00001d035992_P001 Maize plasma membrane 79.29 67.34
GSMUA_Achr7P20760_001 Banana plasma membrane 53.85 65.66
GSMUA_Achr4P09870_001 Banana plasma membrane 49.59 63.48
VIT_03s0038g04340.t01 Wine grape plasma membrane 62.96 62.88
GSMUA_AchrUn_... Banana plasma membrane, vacuole 52.43 62.39
CDY42608 Canola plasma membrane 49.7 61.76
CDY41962 Canola plasma membrane 61.78 60.77
CDX90312 Canola plasma membrane 61.54 60.68
Bra010704.1-P Field mustard plasma membrane 61.54 60.68
CDY56768 Canola plasma membrane 61.3 60.58
CDX72717 Canola plasma membrane 61.18 60.47
CDY12121 Canola plasma membrane 61.3 60.44
Bra011875.1-P Field mustard plasma membrane 61.66 60.44
Bra030296.1-P Field mustard plasma membrane 60.12 60.33
Bra033598.1-P Field mustard plasma membrane 60.83 60.33
KRH20802 Soybean plasma membrane 61.54 59.84
AT4G39110.1 Thale cress plasma membrane 62.13 59.8
AT2G21480.1 Thale cress plasma membrane 61.3 59.47
CDY15889 Canola plasma membrane 60.12 59.42
KRH27450 Soybean plasma membrane 61.54 59.23
CDX99588 Canola plasma membrane 59.76 59.0
PGSC0003DMT400094265 Potato plasma membrane 57.04 55.21
Solyc01g109950.2.1 Tomato plasma membrane 56.8 54.98
PGSC0003DMT400008766 Potato plasma membrane 55.27 53.55
Solyc10g054050.1.1 Tomato plasma membrane 48.4 51.45
Os01t0253000-01 Rice plasma membrane 25.92 50.11
Os03t0759600-00 Rice plasma membrane, plastid 48.64 46.08
Os06t0334300-01 Rice plasma membrane 44.14 43.42
Os03t0281500-01 Rice plasma membrane 41.66 41.95
Os03t0333200-01 Rice plasma membrane 43.91 41.55
Os01t0769700-01 Rice plasma membrane 43.67 41.18
Os04t0619600-01 Rice plasma membrane 39.88 39.93
Os05t0280700-01 Rice plasma membrane 40.24 39.13
Os03t0124200-01 Rice plasma membrane 38.46 38.33
Os07t0147600-01 Rice plasma membrane 38.34 38.16
Os05t0318700-02 Rice plasma membrane 39.17 37.57
Os10t0534500-01 Rice plasma membrane 36.33 36.37
Os05t0317700-01 Rice plasma membrane 36.09 36.27
Os01t0155500-01 Rice plasma membrane 39.05 35.26
Os05t0317900-01 Rice plasma membrane 35.27 35.22
Os05t0318600-01 Rice plasma membrane 20.59 30.85
Os01t0253100-01 Rice plasma membrane 22.72 27.12
Protein Annotations
Gene3D:1.10.510.10EntrezGene:107275938MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:2.60.120.430Gene3D:3.30.200.20
ProteinID:BAC24825.1ProteinID:BAD67738.1ProteinID:BAS95926.1ProteinID:EAZ35672.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_domEnsemblPlantsGene:Os06g0126250EnsemblPlants:Os06t0126250-01
PFAM:PF07714PFAM:PF12819ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27003
PANTHER:PTHR27003:SF106InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q8H651SMART:SM00220SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00000AD4CBRefSeq:XP_015642198.1
SEG:seg:::::
Description
RECEPTOR-LIKE CYTOPLASMIC KINASE 193Receptor-like kinase, A member of the Catharanthus roseus receptor-like kinase1-like (CrRLK1L) subfamily, Control of high-affinity potassium transporters, Regulation of pollen tube growth and integrity (Os06t0126250-01)
Coordinates
chr6:-:1397921..1400968
Molecular Weight (calculated)
91004.3 Da
IEP (calculated)
5.463
GRAVY (calculated)
-0.101
Length
845 amino acids
Sequence
(BLAST)
001: MRRRGRMIPP ALLLAAAVAA ALATAVSGQG RPVTESGAQT APTPSTFTPK DNFLIDCGST SPVTTGGKVY KTDAQSNSLL SAKDAIKVAT TDADVPSPLY
101: LTARIFRDEA VYSFPLTVPG WHFVRLYLFP LKNSDFDLTT ATFTVSTDTN VLLHSFTAEN KPVMKEFLVN ATENHLAVKF YPLKGSAAFI NAIEVVNAPD
201: ELITDMAMGI APVGEMTGLA EAAYQVVYRI NVGGPAIAPD KDTLGRQWDV DAPYVQSKEA VKDVSVPVGN IKFPDGTSKL VAPAQVYASC AKMADAGVGS
301: PSFNMSWKME VDPAFGYLVR LFFADIVSKS MNDLYFNVFV NGRKAISGLD LSTVTGELSA AYYKDIVVNS SIATDKLSIQ VGPMGEDTGR VDALLSGVEV
401: LKMSNSVGSL DGEFGVDGKK ADDGSGSRKA VAAVGFAMMF GAFAGLGAMA VKWYKRPQDW ERRNSFSSWL LPIHTGQSFT TSKGGSSKSG YTFSSTLGLG
501: RFFSFAEIQA ATKNFEESAI IGVGGFGNVY IGEIDDGTKV AVKRGNPQSE QGINEFNTEI QMLSKLRHRH LVSLIGYCDE NAEMILVYEY MHNGPFRDHI
601: YGKDLPALTW KQRLEICIGA ARGLHYLHTG TAQGIIHRDV KTTNILLDDN FVAKVSDFGL SKDGPGMNQL HVSTAVKGSF GYLDPEYFRC QQLTDKSDVY
701: SFGVVLLETL CARPPIDPQL PREQVSLAEW GMQWKRKGLI EKIMDPKLAG TVNQESLNKF AEAAEKCLAE FGSDRISMGD VLWNLEYALQ LQDANPPEGA
801: DKPADHDGAG AAPATSSGSG VSTVPDVSTT AAGEMFAQLA DMKGR
Best Arabidopsis Sequence Match ( AT4G39110.1 )
(BLAST)
001: MEIRKKPNIF TVLVIDFSSK PSMALLLAIL LFLSGPSASA VAAAAVGPAT GFKPADDILI DCGSKSSSKT PDGRVFKSDQ ETIQYIEAKE DIQVSAPPSD
101: KVASPIYLTA RIFREEATYK FHLTRPGWHW VRLHFLAFPN DKFDLQQATF SVLTEKYVLL HNFKISNNNN DSQAAVQKEY LVNMTDAQFA LRFRPMKSSA
201: AFINAIEVVS APDELISDSG TALFPVIGFS GLSDYAYQSV YRVNVGGPLI MPQNDTLGRT WIPDKEFLKD ENLAKDVKTT PSAIKYPPEV TPLIAPQTVY
301: ATAVEMANSL TIDPNFNVSW NFPSNPSFNY LIRLHFCDIV SKSLNDLYFN VYINGKTAIS GLDLSTVAGN LAAPYYKDIV VNATLMGPEL QVQIGPMGED
401: TGTKNAILNG VEVLKMSNSV NSLDGEFGVD GRTTGMGKHG MVATAGFVMM FGAFIGLGAM VYKWKKRPQD WQKRNSFSSW LLPIHAGDST FMTSKGGSQK
501: SNFYNSTLGL GRYFSLSELQ EATKNFEASQ IIGVGGFGNV YIGTLDDGTK VAVKRGNPQS EQGITEFQTE IQMLSKLRHR HLVSLIGYCD ENSEMILVYE
601: FMSNGPFRDH LYGKNLAPLT WKQRLEICIG SARGLHYLHT GTAQGIIHRD VKSTNILLDE ALVAKVADFG LSKDVAFGQN HVSTAVKGSF GYLDPEYFRR
701: QQLTDKSDVY SFGVVLLEAL CARPAINPQL PREQVNLAEW AMQWKRKGLL EKIIDPHLAG TINPESMKKF AEAAEKCLED YGVDRPTMGD VLWNLEYALQ
801: LQEAFTQGKA EETENAKPDV VTPGSVPVSD PSPITPSVTT NEAATVPVPA KVEENSGTAV DEHSGTAMFT QFANLNGR
Arabidopsis Description
Probable receptor-like protein kinase At4g39110 [Source:UniProtKB/Swiss-Prot;Acc:Q9T020]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.