Factsheet for PGSC0003DMT400094265

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
nucleus 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	cytosol, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g109950.2.1	Tomato	plasma membrane	97.59	97.59
PGSC0003DMT400008766	Potato	plasma membrane	75.14	75.23
VIT_03s0038g04340.t01	Wine grape	plasma membrane	62.89	64.89
KRH20802	Soybean	plasma membrane	61.05	61.33
PGSC0003DMT400043793	Potato	cytosol, plastid	22.57	60.99
KRH27450	Soybean	plasma membrane	61.17	60.82
Bra010704.1-P	Field mustard	plasma membrane	59.22	60.33
CDX90312	Canola	plasma membrane	59.22	60.33
CDY12121	Canola	plasma membrane	58.65	59.74
CDY56768	Canola	plasma membrane	58.3	59.53
CDY41962	Canola	plasma membrane	58.3	59.25
Bra030296.1-P	Field mustard	plasma membrane	57.04	59.14
Bra011875.1-P	Field mustard	plasma membrane	58.3	59.05
Bra033598.1-P	Field mustard	plasma membrane	57.62	59.04
CDX72717	Canola	plasma membrane	57.62	58.83
AT4G39110.1	Thale cress	plasma membrane	58.99	58.66
AT2G21480.1	Thale cress	plasma membrane	58.3	58.44
CDY15889	Canola	plasma membrane	57.16	58.36
CDX99588	Canola	plasma membrane	57.04	58.18
CDY42608	Canola	plasma membrane	44.56	57.21
Os06t0126250-01	Rice	plasma membrane	55.21	57.04
GSMUA_Achr7P20760_001	Banana	plasma membrane	44.44	55.99
PGSC0003DMT400035099	Potato	cytosol	23.94	55.15
PGSC0003DMT400063408	Potato	mitochondrion	46.96	54.45
Zm00001d045515_P001	Maize	plasma membrane	52.69	54.05
HORVU7Hr1G010130.1	Barley	plasma membrane	52.12	53.91
TraesCS7D01G050100.1	Wheat	plasma membrane	52.0	53.79
PGSC0003DMT400043784	Potato	cytosol	22.11	53.46
EER89103	Sorghum	plasma membrane	52.81	53.42
TraesCS7A01G055000.1	Wheat	plasma membrane	51.66	53.37
GSMUA_Achr4P09870_001	Banana	plasma membrane	40.32	53.33
TraesCS4A01G441600.1	Wheat	plasma membrane	51.55	53.32
GSMUA_AchrUn_...	Banana	plasma membrane, vacuole	41.47	50.99
PGSC0003DMT400049559	Potato	plasma membrane	46.05	48.14
PGSC0003DMT400090495	Potato	plasma membrane	46.05	48.14
PGSC0003DMT400064427	Potato	plasma membrane	45.82	47.96
Zm00001d035992_P001	Maize	plasma membrane	51.66	45.33
PGSC0003DMT400040185	Potato	plasma membrane	42.96	44.96
PGSC0003DMT400025093	Potato	plasma membrane	42.38	44.63
PGSC0003DMT400060204	Potato	plasma membrane	42.84	44.42
PGSC0003DMT400067688	Potato	plasma membrane	41.01	43.77
PGSC0003DMT400060442	Potato	plasma membrane	38.37	40.95
PGSC0003DMT400076840	Potato	plasma membrane	41.47	40.72
PGSC0003DMT400056220	Potato	plasma membrane	38.37	39.23
PGSC0003DMT400018850	Potato	plasma membrane	39.86	39.15
PGSC0003DMT400054599	Potato	plasma membrane	38.26	38.48
PGSC0003DMT400038535	Potato	plasma membrane	35.85	38.26
PGSC0003DMT400003464	Potato	plasma membrane	36.31	37.03
PGSC0003DMT400003461	Potato	plasma membrane	36.08	36.08
PGSC0003DMT400018829	Potato	plasma membrane	37.69	33.0
PGSC0003DMT400091500	Potato	plasma membrane	32.53	25.02
PGSC0003DMT400027429	Potato	plasma membrane	32.99	24.24

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:2.60.120.430	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M1DTS4	InterPro:Malectin-like_Carb-bd_dom	PFAM:PF07714	PFAM:PF12819	EnsemblPlantsGene:PGSC0003DMG400043836	PGSC:PGSC0003DMG400043836
EnsemblPlants:PGSC0003DMT400094265	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF243
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002952AA3	SEG:seg	:	:

Description

Kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400043836]

Coordinates

chr1:-:86334523..86337144

Molecular Weight (calculated)

96033.8 Da

IEP (calculated)

5.825

GRAVY (calculated)

-0.207

Length

873 amino acids

Sequence
(BLAST)

001: MPRGSPPPSS STIMANILVA FVCLIFIGPS SVIPVSAQSD STAPAKSFPA FTPSDNYLIN CGSTSPTTLP GNRAFQPDET TAKYLAYSGR DLHISAPDNK
101: NVPSPMYLSA KIFDSEATYT FHVASPGLHW IRLYFYPLQN NEFNLQTAKF SVSVDTLVLL RDYQMEKNEP VMKEFLVNVT TERYAIKFAP SQGSIAFANA
201: IEFVTAPGKL LDYSVPLLFP VSQKFDLSTS NFETTYRLNV GGAYLDATND TLGRSWLSDE PFRNSATGQA VTVQPSVIQY PTAGGSPLIA PPTVYSSAVK
301: MADSETTIPN FNISWTMDID TSYTYLIRLH FCDIISKSLN ELYFNVYIND KMAISGLDLS SLTQRLSTAF YKDFVIDASS ASNPLSVKVS PVNDVQGFKN
401: AILNGLEVFR MNNSMGSLDG QYGVDGTKSS GPSKTVAYVG FAMMFGAFVG LGAIVFKWQK RPQDWQKRNS FSSWLLPLHA GDTSFMAGSK ASLSRKSQFF
501: SSNMGLGRYF SFAELSDATN NWESTAIIGV GGFGNVYYGE IDDGTKVAVK RGNPQSEQGI NEFQTEIQML SKLRHRHLVS LIGYCDENTE MILVYEFMQN
601: GPFRDHLYGK NFPPLTWKQR LEICIGSARG LHYLHTGAST AIIHRDVKTT NILLDENLVA KMADFGLSKD CLANETHVST AVKGSFGYLD PEYFRKQQLT
701: DKSDVYSFGV VLLEALCARP AINPSLPREQ VNLAEWGMQW KKKGLLDKII DPTLVGQINP ESMKKFGEAA EKCLAEYGAD RPSMGDVLWN LEYALQLQEA
801: SLQGKAEEEN KASSSPVSPV IVAPTPAPVP APSTPDNRPV STPEQTRNPA ELQTIDDHSG TKMFDQFGAL NGR

Best Arabidopsis Sequence Match ( AT4G39110.1 )
(BLAST)

001: MEIRKKPNIF TVLVIDFSSK PSMALLLAIL LFLSGPSASA VAAAAVGPAT GFKPADDILI DCGSKSSSKT PDGRVFKSDQ ETIQYIEAKE DIQVSAPPSD
101: KVASPIYLTA RIFREEATYK FHLTRPGWHW VRLHFLAFPN DKFDLQQATF SVLTEKYVLL HNFKISNNNN DSQAAVQKEY LVNMTDAQFA LRFRPMKSSA
201: AFINAIEVVS APDELISDSG TALFPVIGFS GLSDYAYQSV YRVNVGGPLI MPQNDTLGRT WIPDKEFLKD ENLAKDVKTT PSAIKYPPEV TPLIAPQTVY
301: ATAVEMANSL TIDPNFNVSW NFPSNPSFNY LIRLHFCDIV SKSLNDLYFN VYINGKTAIS GLDLSTVAGN LAAPYYKDIV VNATLMGPEL QVQIGPMGED
401: TGTKNAILNG VEVLKMSNSV NSLDGEFGVD GRTTGMGKHG MVATAGFVMM FGAFIGLGAM VYKWKKRPQD WQKRNSFSSW LLPIHAGDST FMTSKGGSQK
501: SNFYNSTLGL GRYFSLSELQ EATKNFEASQ IIGVGGFGNV YIGTLDDGTK VAVKRGNPQS EQGITEFQTE IQMLSKLRHR HLVSLIGYCD ENSEMILVYE
601: FMSNGPFRDH LYGKNLAPLT WKQRLEICIG SARGLHYLHT GTAQGIIHRD VKSTNILLDE ALVAKVADFG LSKDVAFGQN HVSTAVKGSF GYLDPEYFRR
701: QQLTDKSDVY SFGVVLLEAL CARPAINPQL PREQVNLAEW AMQWKRKGLL EKIIDPHLAG TINPESMKKF AEAAEKCLED YGVDRPTMGD VLWNLEYALQ
801: LQEAFTQGKA EETENAKPDV VTPGSVPVSD PSPITPSVTT NEAATVPVPA KVEENSGTAV DEHSGTAMFT QFANLNGR

Arabidopsis Description

Probable receptor-like protein kinase At4g39110 [Source:UniProtKB/Swiss-Prot;Acc:Q9T020]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.