Factsheet for PGSC0003DMT400038535

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g044160.1.1	Tomato	plasma membrane	89.36	89.47
VIT_07s0129g00950.t01	Wine grape	cytosol	27.02	63.87
PGSC0003DMT400043793	Potato	cytosol, plastid	21.27	53.87
VIT_07s0129g00960.t01	Wine grape	plasma membrane	54.52	53.73
VIT_07s0129g00910.t01	Wine grape	plasma membrane	51.83	50.96
VIT_07s0129g00870.t01	Wine grape	plasma membrane	51.59	50.84
VIT_07s0129g00880.t01	Wine grape	plasma membrane	51.34	50.66
PGSC0003DMT400043784	Potato	cytosol	22.0	49.86
VIT_07s0129g00890.t01	Wine grape	plasma membrane	43.4	49.65
PGSC0003DMT400035099	Potato	cytosol	22.25	48.02
VIT_07s0129g00920.t01	Wine grape	cytosol, mitochondrion, plasma membrane, vacuole	50.73	47.98
CDY46084	Canola	mitochondrion, plasma membrane, plastid	30.07	44.32
PGSC0003DMT400067688	Potato	plasma membrane	43.15	43.15
AT2G23200.1	Thale cress	plasma membrane	41.32	40.53
PGSC0003DMT400025093	Potato	plasma membrane	40.95	40.41
CDX76865	Canola	plasma membrane	39.85	40.25
TraesCS2B01G536700.1	Wheat	plasma membrane	30.81	40.0
Bra039190.1-P	Field mustard	plasma membrane	40.71	39.93
PGSC0003DMT400063408	Potato	mitochondrion	36.55	39.71
CDY21480	Canola	plasma membrane	40.59	39.57
GSMUA_Achr11P...	Banana	plasma membrane	33.62	39.45
PGSC0003DMT400090495	Potato	plasma membrane	40.22	39.4
PGSC0003DMT400049559	Potato	plasma membrane	40.22	39.4
PGSC0003DMT400040185	Potato	plasma membrane	39.85	39.09
GSMUA_Achr8P12240_001	Banana	vacuole	30.2	38.78
PGSC0003DMT400064427	Potato	plasma membrane	38.88	38.13
PGSC0003DMT400060204	Potato	plasma membrane	39.0	37.89
Os03t0124200-01	Rice	plasma membrane	38.88	37.5
TraesCS2D01G509800.1	Wheat	plasma membrane	37.04	36.86
Os10t0534500-01	Rice	plasma membrane	37.78	36.61
TraesCS4B01G345400.1	Wheat	plasma membrane	38.75	36.48
Zm00001d027436_P001	Maize	mitochondrion	35.57	36.33
HORVU4Hr1G084510.2	Barley	plasma membrane	38.63	36.2
TraesCS5A01G514500.1	Wheat	plasma membrane	38.63	36.2
HORVU2Hr1G113120.1	Barley	plasma membrane	36.31	35.96
TraesCS4D01G340500.1	Wheat	plasma membrane	38.26	35.89
PGSC0003DMT400094265	Potato	plasma membrane	38.26	35.85
EER95602	Sorghum	plasma membrane	37.53	35.82
PGSC0003DMT400008766	Potato	plasma membrane	38.02	35.67
PGSC0003DMT400060442	Potato	plasma membrane	35.33	35.33
TraesCS4B01G367000.1	Wheat	plasma membrane	36.19	35.32
PGSC0003DMT400056220	Potato	plasma membrane	36.19	34.66
PGSC0003DMT400076840	Potato	plasma membrane	37.65	34.65
HORVU4Hr1G087720.1	Barley	plasma membrane, plastid	35.82	33.72
PGSC0003DMT400054599	Potato	plasma membrane	35.33	33.29
PGSC0003DMT400018850	Potato	plasma membrane	35.94	33.07
PGSC0003DMT400003464	Potato	plasma membrane	34.6	33.06
PGSC0003DMT400003461	Potato	plasma membrane	34.35	32.19
PGSC0003DMT400018829	Potato	plasma membrane	35.82	29.39
PGSC0003DMT400091500	Potato	plasma membrane	32.15	23.17
PGSC0003DMT400027429	Potato	plasma membrane	31.91	21.97

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102586020	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:2.60.120.430	Gene3D:3.30.200.20
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1B718	InterPro:Malectin-like_Carb-bd_dom	PFAM:PF07714	PFAM:PF12819	EnsemblPlantsGene:PGSC0003DMG400014875
PGSC:PGSC0003DMG400014875	EnsemblPlants:PGSC0003DMT400038535	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF59
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0002957BB5	RefSeq:XP_006343202.1	SEG:seg	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400014875]

Coordinates

chr3:+:7287395..7290099

Molecular Weight (calculated)

91574.0 Da

IEP (calculated)

6.127

GRAVY (calculated)

-0.200

Length

818 amino acids

Sequence
(BLAST)

001: MTILLSFLTF SLLFLPFSIS SSTDYTFPEK HFINCGSDSP IVLNRGGGST TFAGDLNFDP NHSDSVKDHT TTTGLAGIYQ TARKFTKSGS YNLPIDENGV
101: YMVRLHFFPF VSLFDAEFSV SASGFLLLSN FSIPRNLITS PVIKEFLVPV LKGRNLEIIF RSDSSFAFVN AIEAFVTPQG FIPNSNDTTH VTSSKNDLSS
201: SVLNVIHRIN VGGSNITDDT DTMRRKWVAD DDYLLIKRFA KNLPMYSGSL NYDQVRGATP YDAPDLVYKT AKEMNSNHTE TQSNITWRLE VKRNATFFVR
301: LHFCDIVSVQ RNGTVFNAYI YGQFGKPISP YDRFEKFAVP FYVDFVVDSD GSGFMNISVG PRNDSKSINA FLNGVEIMEL INDRVEWSGE KNNNVWIIVG
401: SVVGGVVLIS VSIVVILCCL KPRKAQTVEN SSWWPRMSVN AGSTEDRTTV RTPIGSTTPD MNLGLKISFA EILHATNKFD PKFMIGEGGF GKVYKGTLHS
501: GVKVAVKRSE AGHGQGLMEF QTEIMLLSKI RHQHLVSLIG YCDERDEMIL VYEFMAKGTL REHLYSSNED LGKSSSRSKL SWDQRLQICI GAANGLQYLH
601: AGLPEPTIHR DIKSTNILLD EDYVAKVADF GLSKSGQPEE THIVTDVKGS FGYLDPEYLK SMQLTQKSDV YSFGVVLFEV LCARPAVDNM LPRNQMNLAE
701: WGLSWLKENQ IEKIIDPFLV GKINPNSLRK FGETAEKCLQ ENGTDRPKMM DVLWDLDYAR QLQHPTMPQQ SHEDTNSDVS WQMALPGINR LPSINVSTSF
801: VSVTDSEAFS ELRIDETR

Best Arabidopsis Sequence Match ( AT2G23200.1 )
(BLAST)

001: MENFCFQDSV SLFITIMVLV LLPRLSLSDT STYTRPENFY VNCGSDSNVF YGGQTFVGDT NSSTNSVSFT NKGTEVINDQ SSVAPEIYRT VRIFRHPSSY
101: KFKLDSLGLH FVRLHFSVVF SRADLLTARF TVSATSGSNH HLKSFSPQNL TNTPRVEEFL LMMNSLEFEI RFVPDHSSLA LINAIEVFSA PDDLEIPSAS
201: DKNLHTIYRL NVGGEKITPD NDTLGRTWLP DDDDFLYRKD SARNINSTQT PNYVGGLSSA TDSTAPDFVY KTAKAMNRSS NEQVGMLMNV TWSFKVKSNH
301: RHFIRIHFSD ILSNLSNSDS DFYLFVNGYW RVDVKPSEQP RLASPFFKDV VNVSDGSGLL NISIGTKEAN KDAGFLNGLE MMEVLSKSGS DYSNRSSSRV
401: HIITGCAVAA AAASALVFSL LFMVFLKRRR SKKTKPEVEG TVWSPLPLHR GGSSDNRPIS QYHNSPLRNL HLGLTIPFTD ILSATNNFDE QLLIGKGGFG
501: YVYKAILPDG TKAAIKRGKT GSGQGILEFQ TEIQVLSRIR HRHLVSLTGY CEENSEMILV YEFMEKGTLK EHLYGSNLPS LTWKQRLEIC IGAARGLDYL
601: HSSGSEGAII HRDVKSTNIL LDEHNIAKVA DFGLSKIHNQ DESNISINIK GTFGYLDPEY LQTHKLTEKS DVYAFGVVLL EVLFARPAID PYLPHEEVNL
701: SEWVMFCKSK GTIDEILDPS LIGQIETNSL KKFMEIAEKC LKEYGDERPS MRDVIWDLEY VLQLQMMTNR REAHEEDSTA INSGGSLVAP RLMVSDSFST
801: NSIFQNGDES KNRFGFTDSS ETRVFSQLKI SDAR

Arabidopsis Description

Probable receptor-like protein kinase At2g23200 [Source:UniProtKB/Swiss-Prot;Acc:O22187]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.